Result of FASTA (ccds) for pF1KE2653
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2653, 511 aa
  1>>>pF1KE2653 511 - 511 aa - 511 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1484+/-0.000947; mu= 18.7054+/- 0.057
 mean_var=63.2592+/-12.665, 0's: 0 Z-trim(105.0): 16  B-trim: 24 in 1/47
 Lambda= 0.161255
 statistics sampled from 8209 (8215) to 8209 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.252), width:  16
 Scan time:  2.620

The best scores are:                                      opt bits E(32554)
CCDS30783.1 AMY1B gene_id:277|Hs108|chr1           ( 511) 3650 858.1       0
CCDS30784.1 AMY1C gene_id:278|Hs108|chr1           ( 511) 3650 858.1       0
CCDS30782.1 AMY1A gene_id:276|Hs108|chr1           ( 511) 3650 858.1       0
CCDS782.1 AMY2B gene_id:280|Hs108|chr1             ( 511) 3550 834.9       0
CCDS783.1 AMY2A gene_id:279|Hs108|chr1             ( 511) 3541 832.8       0


>>CCDS30783.1 AMY1B gene_id:277|Hs108|chr1                (511 aa)
 initn: 3650 init1: 3650 opt: 3650  Z-score: 4586.0  bits: 858.1 E(32554):    0
Smith-Waterman score: 3650; 100.0% identity (100.0% similar) in 511 aa overlap (1-511:1-511)

               10        20        30        40        50        60
pF1KE2 MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE2 RYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 RYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE2 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
              430       440       450       460       470       480

              490       500       510 
pF1KE2 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
       :::::::::::::::::::::::::::::::
CCDS30 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
              490       500       510 

>>CCDS30784.1 AMY1C gene_id:278|Hs108|chr1                (511 aa)
 initn: 3650 init1: 3650 opt: 3650  Z-score: 4586.0  bits: 858.1 E(32554):    0
Smith-Waterman score: 3650; 100.0% identity (100.0% similar) in 511 aa overlap (1-511:1-511)

               10        20        30        40        50        60
pF1KE2 MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE2 RYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 RYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE2 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
              430       440       450       460       470       480

              490       500       510 
pF1KE2 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
       :::::::::::::::::::::::::::::::
CCDS30 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
              490       500       510 

>>CCDS30782.1 AMY1A gene_id:276|Hs108|chr1                (511 aa)
 initn: 3650 init1: 3650 opt: 3650  Z-score: 4586.0  bits: 858.1 E(32554):    0
Smith-Waterman score: 3650; 100.0% identity (100.0% similar) in 511 aa overlap (1-511:1-511)

               10        20        30        40        50        60
pF1KE2 MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE2 RYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 RYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE2 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
              430       440       450       460       470       480

              490       500       510 
pF1KE2 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
       :::::::::::::::::::::::::::::::
CCDS30 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
              490       500       510 

>>CCDS782.1 AMY2B gene_id:280|Hs108|chr1                  (511 aa)
 initn: 3550 init1: 3550 opt: 3550  Z-score: 4460.3  bits: 834.9 E(32554):    0
Smith-Waterman score: 3550; 97.5% identity (98.4% similar) in 511 aa overlap (1-511:1-511)

               10        20        30        40        50        60
pF1KE2 MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
       ::.: ::::::::::::: :::::::::::::::::::::::::::::::::::::::::
CCDS78 MKFFLLLFTIGFCWAQYSPNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
CCDS78 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMSGN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
CCDS78 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLVGL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
       ::::: ::::::::::::::::::::::::.::::::::::::::::::::::::::: :
CCDS78 LDLALEKDYVRSKIAEYMNHLIDIGVAGFRLDASKHMWPGDIKAILDKLHNLNSNWFPAG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE2 RYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
       : :.::.::::::::::.::: ::::::::::::::::::::::::::::::::::::::
CCDS78 RQFQNGNDVNDWVGPPNNNGVIKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE2 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
              430       440       450       460       470       480

              490       500       510 
pF1KE2 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
       :::::::::::::::::::::::::::::::
CCDS78 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
              490       500       510 

>>CCDS783.1 AMY2A gene_id:279|Hs108|chr1                  (511 aa)
 initn: 3541 init1: 3541 opt: 3541  Z-score: 4448.9  bits: 832.8 E(32554):    0
Smith-Waterman score: 3541; 96.9% identity (98.6% similar) in 511 aa overlap (1-511:1-511)

               10        20        30        40        50        60
pF1KE2 MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
       ::.: ::::::::::::: :::::::::::::::::::::::::::::::::::::::::
CCDS78 MKFFLLLFTIGFCWAQYSPNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
       ::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 NENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::
CCDS78 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLTGL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
       ::::: ::::::::::::::::::::::::.::::::::::::::::::::::::::: :
CCDS78 LDLALEKDYVRSKIAEYMNHLIDIGVAGFRLDASKHMWPGDIKAILDKLHNLNSNWFPAG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
       :.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 FVPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE2 RYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
       : :.::.::::::::::.::: :::::::::::::::::::::::::::: :::::::::
CCDS78 RQFQNGNDVNDWVGPPNNNGVIKEVTINPDTTCGNDWVCEHRWRQIRNMVIFRNVVDGQP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE2 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
       :::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::
CCDS78 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWSFSLTLQTGLPAGTYCDVISGDKINGNCTGI
              430       440       450       460       470       480

              490       500       510 
pF1KE2 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
       :::::::::::::::::::::::::::::::
CCDS78 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
              490       500       510 




511 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 17:44:45 2016 done: Tue Nov  8 17:44:45 2016
 Total Scan time:  2.620 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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