GENSCAN 1.0	Date run:  6-Nov-116	Time: 05:18:25

Sequence gi568815575f:130072063_130284737 : 212675 bp : 44.45% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 Intr -    355    164  192  2  0   95  100   161 0.974  17.46
 1.07 Intr -   2079   1987   93  1  0    4   84    95 0.468   0.64
 1.06 Intr -   2690   2519  172  2  1  101   62   137 0.778  11.92
 1.05 Intr -   9273   9194   80  1  2    9   80   120 0.018   2.57
 1.04 Intr -  10079  10042   38  1  2  115  116    -8 0.018   2.61
 1.03 Intr -  14471  14353  119  2  2   85   97    10 0.001   0.86
 1.02 Intr -  20939  20832  108  2  0   76   35    88 0.035   2.78
 1.01 Init -  26147  26004  144  2  0   63   91    88 0.335   4.74
 1.00 Prom -  33975  33936   40                              -3.86

 2.00 Prom +  36515  36554   40                              -5.66
 2.01 Init +  45203  45323  121  1  1   83   68   114 0.765   9.26
 2.02 Term +  48199  48356  158  2  2   81   41    91 0.272   1.80
 2.03 PlyA +  50898  50903    6                               1.05

 3.14 PlyA -  52278  52273    6                               1.05
 3.13 Term -  57566  57495   72  2  0  104   48    89 0.987   4.41
 3.12 Intr -  58104  57908  197  1  2   47  100   217 0.994  17.93
 3.11 Intr -  59737  59613  125  0  2  104  110   125 0.999  16.53
 3.10 Intr -  61393  61251  143  1  2   94   50    28 0.964  -1.25
 3.09 Intr -  64123  63983  141  1  0  114  103   155 0.996  20.15
 3.08 Intr -  64669  64581   89  2  2  100  116    61 0.999   9.79
 3.07 Intr -  65123  65016  108  0  0  116   65   114 0.999  12.16
 3.06 Intr -  68555  68471   85  2  1   55   99    45 0.759   1.69
 3.05 Intr -  73507  73417   91  0  1  102  105    52 0.973   8.30
 3.04 Intr -  75561  75431  131  0  2   61   93    85 0.999   5.79
 3.03 Intr -  75814  75690  125  2  2   61   86    83 0.925   5.70
 3.02 Intr -  77506  77407  100  1  1   71  105    38 0.943   3.48
 3.01 Init -  84488  84399   90  2  0   48   92    61 0.607   2.99
 3.00 Prom -  86791  86752   40                              -5.66

 4.00 Prom +  92217  92256   40                              -5.16
 4.01 Sngl +  93476  93940  465  1  0   49   47   265 0.822  14.71
 4.02 PlyA +  95693  95698    6                               1.05

 5.00 Prom +  97525  97564   40                              -7.96
 5.01 Init + 100001 100258  258  1  0   98   53   667 0.441  59.34
 5.02 Term + 112223 112678  456  1  0  131   47   564 0.981  51.73
 5.03 PlyA + 112789 112794    6                               1.05

 6.00 Prom + 125823 125862   40                              -4.86
 6.01 Init + 126081 126239  159  2  0   71   64   138 0.615   9.52
 6.02 Term + 128565 128669  105  2  0  119   41     4 0.486  -2.79
 6.03 PlyA + 128877 128882    6                               1.05

 7.12 PlyA - 129313 129308    6                               1.05
 7.11 Term - 132930 132859   72  0  0   70   38    72 0.235  -1.69
 7.10 Intr - 135952 135862   91  0  1   39   70    77 0.179   1.00
 7.09 Intr - 143952 143729  224  0  2   84   85    40 0.444   0.23
 7.08 Intr - 148418 148287  132  2  0   48   87    68 0.877   3.54
 7.07 Intr - 154843 154697  147  1  0   83   94    34 0.935   3.93
 7.06 Intr - 155720 155620  101  0  2  107   86    40 0.997   5.53
 7.05 Intr - 157072 156915  158  0  2   54   94    82 0.790   5.05
 7.04 Intr - 158665 158448  218  1  2   80   77    31 0.346  -1.50
 7.03 Intr - 164258 164152  107  0  2   56   93    24 0.308  -0.37
 7.02 Intr - 164577 164407  171  1  0   71   92    26 0.258   1.21
 7.01 Init - 174932 174797  136  2  1   70   82   159 0.944  13.80
 7.00 Prom - 181297 181258   40                              -8.26

 8.00 Prom + 181731 181770   40                               0.24
 8.01 Init + 193541 193614   74  1  2   41   84    49 0.439   0.34
 8.02 Intr + 196679 196950  272  2  2   56   40   156 0.205   4.79
 8.03 Intr + 198848 198999  152  0  2   78   65    43 0.181   0.88
 8.04 Term + 210596 210937  342  1  0   10   44   240 0.239   6.31
 8.05 PlyA + 211421 211426    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -   9268   9194   75  1  0   93   80   119 0.967  12.69
S.002 Term + 181337 181865  529  2  1   66   47   214 0.858   8.83


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:130072063_130284737|GENSCAN_predicted_peptide_1|316_aa
MNIQVSLWQAGPQALRACARQQSFVHTPCLPMAQGGSRLREPVVTKEQYSQDSKPEYREG
HLFGFVGSTGQLRDLSVHGFWYSQAVYTVGGLWVPWRKRKKHLFAWDLPSNHSSSGTDQG
LQRRCGPSKLTGPHSQDSMAITLQPSDLIFEFASNGMDDDIHQLEDPSVFPAVIVEQVPY
PDLLHLYSGLELDDVHNGIITDGTLCMTQDQILEGSFLLTDDNEATSHTMSTAEVLLNME
SPSDILDEKQIFSTSEMLPDSDPAPAVTLPNYLFPASEPDALNRAGDTSDQEGHSLEEKA
SREESAKKTGKSKKRX

>gi568815575f:130072063_130284737|GENSCAN_predicted_CDS_1|948_bp
atgaatattcaggtttcgctctggcaggcagggccccaggcactgcgggcctgtgccagg
cagcaatccttcgtccacaccccctgcctgcccatggctcaggggggctccaggctgcgg
gagcctgtagtgacgaaagagcagtattctcaagattcgaaacctgagtacagggagggc
cacctttttggatttgtgggctccacaggccaactgcgggacttgagtgtgcatggattt
tggtattcccaggcagtctacactgtgggtgggctgtgggtcccctggagaaagaggaaa
aagcatctctttgcctgggacctgccatctaatcactcctcctctgggacagatcaaggc
ctgcaaagaagatgtggcccctcaaagctaactggcccccactcccaagacagcatggct
attaccctacagcccagtgacctgatctttgagttcgcaagcaacgggatggatgatgat
atccaccagctggaagacccctctgtgttcccagctgtgatcgtggagcaggtaccctac
cctgatttactgcatctgtactcgggactggagttggacgacgttcacaatggcatcata
acagacgggaccttgtgcatgacgcaggatcagatcctggaaggcagttttttgctgaca
gatgacaatgaggccacctcgcacaccatgtcaaccgcggaagtcttactcaatatggag
tctcccagcgatatcctggatgagaagcagatcttcagtacctccgaaatgcttccagac
tcggaccctgcaccagctgtcactctgcccaactacctgtttcctgcctctgagcccgat
gccctgaacagggcgggtgacactagtgaccaggaggggcattctctggaggagaaggcc
tccagagaggaaagtgccaagaagactgggaaatcaaagaagagaann

>gi568815575f:130072063_130284737|GENSCAN_predicted_peptide_2|92_aa
MKAPTKLQKITGFQLSSSWTAAQEGWLPGGDDADTGGAAGSAEDRIDKHGPPNCPSRSGL
KQSLYLSCRPSRVSGCAPALATVCIPCAGDAF

>gi568815575f:130072063_130284737|GENSCAN_predicted_CDS_2|279_bp
atgaaagcccctacaaaacttcagaagatcaccggctttcaattgtcttcgagctggaca
gcagctcaggagggctggctgcctggaggggatgatgccgacacaggaggcgctgctggc
tctgcagaagaccggattgacaagcacggaccacctaactgtccctctagatccggactt
aagcagagcctctacctctcatgtcggccgagccgagtctcaggctgcgccccagccttg
gccacagtctgcatcccctgtgctggagatgcgttctaa

>gi568815575f:130072063_130284737|GENSCAN_predicted_peptide_3|498_aa
MASSGASGGKIDNSVLVLIVGLSTVGAGAYAYKTMKEDEKRYNERISGLGLTPEQKQKKA
ALSASEGEEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRP
PLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKV
VQLDVRDNMVKLNDGSQITYEKCLIATARALGTEVIQLFPEKGNMGKILPEYLSNWTMEK
VRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEID
SDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKP
YWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSESETE
SEASEITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWNIFNRMPIARKIIKDG
EQHEDLNEVAKLFNIHED

>gi568815575f:130072063_130284737|GENSCAN_predicted_CDS_3|1497_bp
atggctagctctggtgcatcagggggcaaaatcgataattctgtgttagtccttattgtg
ggcttatcaacagtaggagctggtgcctatgcctacaagactatgaaagaggatgaaaaa
agatacaatgaaagaatttcagggttagggctgacaccagaacagaaacagaaaaaggcc
gcgttatctgcttcagaaggagaggaagttcctcaagacaaggcgccaagtcatgttcct
ttcctgctaattggtggaggcacagctgcttttgctgcagccagatccatccgggctcgg
gatcctggggccagggtactgattgtatctgaagatcctgagctgccgtacatgcgacct
cctctttcaaaagaactgtggttttcagatgacccaaatgtcacaaagacactgcgattc
aaacagtggaatggaaaagagagaagcatatatttccagccaccttctttctatgtctct
gctcaggacctgcctcatattgagaatggtggtgtggctgtcctcactgggaagaaggta
gtacagctggatgtgagagacaacatggtgaaacttaatgatggctctcaaataacctat
gaaaagtgcttgattgcaacagctcgagccttgggcacagaagtgattcaactcttcccc
gagaaaggaaatatgggaaagatcctccccgaatacctcagcaactggaccatggaaaaa
gtcagacgagagggggttaaggtgatgcccaatgctattgtgcaatccgttggagtcagc
agtggcaagttacttatcaagctgaaagacggcaggaaggtagaaactgaccacatagtg
gcagctgtgggcctggagcccaatgttgagttggccaagactggtggcctggaaatagac
tcagattttggtggcttccgggtaaatgcagagctacaagcacgctctaacatctgggtg
gcaggagatgctgcatgcttctacgatataaagttgggaaggaggcgggtagagcaccat
gatcacgctgttgtgagtggaagattggctggagaaaatatgactggagctgctaagccg
tactggcatcagtcaatgttctggagtgatttgggccccgatgttggctatgaagctatt
ggtcttgtggacagtagtttgcccacagttggtgtttttgcaaaagcaactgcacaagac
aaccccaaatctgccacagagcagtcaggaactggtatccgatcagagagtgagacagag
tccgaggcctcagaaattactattcctcccagcaccccggcagttccacaggctcccgtc
cagggggaggactacggcaaaggtgtcatcttctacctcagggacaaagtggtcgtgggg
attgtgctatggaacatctttaaccgaatgccaatagcaaggaagatcattaaggacggt
gagcagcatgaagatctcaatgaagtagccaaactattcaacattcatgaagactga

>gi568815575f:130072063_130284737|GENSCAN_predicted_peptide_4|154_aa
MGQSPGSRFLCLGLRTHTVRTKGTSFCFKAPAARPPHRNISATAIRDLLLPFPLTHDRRV
KHREPRPAPPVSSHAHYADSSSQLRVGIGQRSRPARAGEGERRPEAYCAGVALAAALRLV
RTARGFAHALAGRKLAKTLALGSRFSRVCGTVLD

>gi568815575f:130072063_130284737|GENSCAN_predicted_CDS_4|465_bp
atgggtcagtcacctgggagccggttcctctgcctcgggcttcggacgcacacggtccgc
accaagggcaccagcttctgcttcaaagcacccgccgccaggcctccacaccggaacatt
tcggcgaccgctattcgggacctcctccttccctttcctctcacgcacgaccgacgggtc
aaacaccgtgagccccggccagctcccccagtctcttcacacgcacattacgcagactcc
tcctcccagctccgggtgggcattggacagagaagccggcctgctagagccggggaaggg
gaacggcgaccggaggcctactgcgcaggcgtagcactcgctgccgcattgcgattggtc
cgcacggcgagaggatttgcgcatgcactagctggccgcaagctcgcaaagacgctggct
ctaggtagccggttttcgcgagtttgtggcacagtgttggactga

>gi568815575f:130072063_130284737|GENSCAN_predicted_peptide_5|237_aa
MAQPILGHGSLQPASAAGLASLELDSSLDQYVQIRIFKIIVIGDSNVGKTCLTFRFCGGT
FPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQERFRKSMVEHYYRNVHAVVFVYDVT
KMTSFTNLKMWIQECNGHAVPPLVPKVLVGNKCDLREQIQVPSNLALKFADAHNMLLFET
SAKDPKESQNVESIFMCLACRLKAQKSLLYRDAERQQGKVQKLEFPQEANSKTSCPC

>gi568815575f:130072063_130284737|GENSCAN_predicted_CDS_5|714_bp
atggcgcagcccatcctgggccatgggagcctgcagcccgcctcggccgctggcctggcg
tccctggagctcgactcgtcgctggaccagtacgtgcagattcgcatcttcaaaataatc
gtgattggggactccaacgtgggcaagacctgcctgaccttccgcttctgcgggggtacc
ttcccagacaagactgaagccaccatcggcgtggacttcagggagaagaccgtggaaatc
gagggcgagaagatcaaggttcaggtgtgggacacagcaggtcaggaacgtttccgcaaa
agcatggtcgagcattactaccgcaacgtacatgccgtggtcttcgtctatgacgtcacc
aagatgacatctttcaccaacctcaaaatgtggatccaagaatgcaatgggcatgctgtg
cccccactagtccccaaagtgcttgtgggcaacaagtgtgacttgagggaacagatccag
gtgccctccaacttagccctgaaatttgctgatgcccacaacatgctcttgtttgagaca
tcggccaaggaccccaaagagagccagaacgtggagtcgattttcatgtgcttggcttgc
cgattgaaggcccagaaatccctgctgtatcgtgatgctgagaggcagcaggggaaggtg
cagaaactggagttcccacaggaagctaacagtaaaacttcctgtccttgttga

>gi568815575f:130072063_130284737|GENSCAN_predicted_peptide_6|87_aa
MHSSLSKFVDDIKLFQVVKYQTDKNQTAEGFQNQRREVYEYEHEVNYGVAKYKKAPLTDT
QVAHFLTSFRSLLKCHLLKEAQLDHQI

>gi568815575f:130072063_130284737|GENSCAN_predicted_CDS_6|264_bp
atgcacagcagcctctccaagtttgttgatgatattaagctttttcaggtggtcaaatac
caaactgacaagaatcaaactgcagaagggtttcaaaatcagagaagagaggtatatgag
tatgagcatgaggtgaactatggtgtggccaagtataagaaagctcctctgacagatacc
caggtggctcacttcctcacctccttcaggtctttactcaaatgccatcttctcaaggag
gcccaacttgaccatcaaatttaa

>gi568815575f:130072063_130284737|GENSCAN_predicted_peptide_7|518_aa
MAELFMECEEEELEPWQKKVEETQDEDDDELIFVGEISSSKPAISSMKNTSYVLKHPSTS
KVNSVTPKKPKTSEDVPQINPSTSLPLIGSPPVTSSQVMLSKGTNTSSPYDAGADYLRAC
PKCNVQFNLLDPLKYHMKHCCPDMITKFLGVIVKSERPCDEDKTDSETGKLIMLVNEFYY
GRHEGVTEKEPKTYTTFKCFSCSKVLKNNIRFMNHMKHHLELEKQNNESWENHTTCQHCY
RQYPTPFQLQCHIESTHTPHEFSTICKICELSFETEHILLQHMKDTHKPGEMPYVCQVCQ
FRSSTFSDVEAHFRAAHENTKNLLCPFCLKVSKMATPYMNHYMKHQKKGVHRCPKCRLQF
LTSKEKAEHKAQHRTFIKPKELEGLPPGAKVTPPTSQNTTARNPRKSNASRSKTSKLHAT
TSTASKVNTSKPRGRIAKSKAKPSYKQKRQRNRKNKMSLALKNISVGSPIQMTVMKKACT
NLQGMYNLLKGYGYKLLIEIDSCSMEFMQPGARQVGSS

>gi568815575f:130072063_130284737|GENSCAN_predicted_CDS_7|1557_bp
atggcagaactctttatggaatgtgaagaagaagagctagagccatggcagaagaaagta
gaagaaactcaggatgaggatgacgatgaactgatctttgttggagagatatcaagttca
aaaccagccatttcaagtatgaaaaatacttcatatgtgttgaaacatccttctacttct
aaagtaaacagtgttactccaaaaaaaccaaagaccagtgaagatgttcctcagataaat
ccctccacttcattgcctttaattggctctcctccagtgacatcctcccaagttatgctg
tcaaaaggtacaaatacctcatctccatatgatgctggagcagattacctaagagcttgt
ccaaagtgcaatgttcagttcaatcttttggatcctttgaaataccacatgaagcattgt
tgtccagacatgataactaaatttttgggagtaattgttaaatcagaacgtccatgtgat
gaagacaagactgattcagagacaggaaagttgatcatgttagtcaatgagttttattat
ggaaggcatgaaggagtcactgagaaagagccaaagacttacacaacctttaaatgcttc
agttgctcgaaagttcttaaaaataatattaggtttatgaaccacatgaaacatcacttg
gaacttgagaagcagaacaatgaaagctgggaaaaccacaccacctgccagcactgttac
cggcaatatcccacacccttccaactgcagtgccacattgagagtacacacactccccat
gagttttctactatttgcaaaatctgtgaattatcatttgaaacagagcatattctttta
caacatatgaaggacacccataaacctggtgaaatgccatatgtttgccaggtttgccag
tttagatcatcaacattttctgatgtagaagctcattttagagcagcccatgaaaacact
aagaacttgctatgtccattttgcctcaaagttagtaaaatggcaaccccctacatgaat
cattacatgaagcatcagaaaaaaggagttcatcgttgcccaaaatgcagactacaattt
ttgaccagcaaggagaaagctgaacataaggcgcagcatcgtacatttataaagcctaaa
gaactagaaggattgcctcctggagcaaaagtcacacctccgacatctcaaaatacaact
gctagaaatcctagaaaatctaatgccagtagatctaagacaagtaagcttcatgcaact
acatccactgcaagtaaagttaatacaagtaagccaaggggacgtatagctaagtccaaa
gcaaaaccctcttacaagcaaaagcgacagcgcaacagaaaaaataaaatgagccttgct
ttgaagaacataagcgtaggaagtcctatacagatgaccgtgatgaagaaggcttgtacc
aaccttcaaggaatgtacaatttattaaaggggtatggatataagctgctcattgaaata
gattcctgctccatggagttcatgcaacctggtgcaagacaagttggaagttcctaa

>gi568815575f:130072063_130284737|GENSCAN_predicted_peptide_8|279_aa
MGTLDIGADNLSGNFWSTTSWLPNLRGRGPLTESRADRSDWGSDKEEEKEEEEREEREKP
QATASATATPPETSSAEPASQPGAEVYNCTRCLMGRRRLHPLNIRGLLTAHGRTAVSRVS
TSNLKLRGGMVKLPQQDDQKTLIHPNFNLTYSFFREKYSQEDQRALTLDISSESYKWGHK
LIKISFLIPPLWCITIVTWRKEKREQNEEKWQARITAAIIGDALNAQRASKGNPKGNKDN
ASKGSCFKCKKNGHWAKECSKPLPGPYCQCEGTSCGPWH

>gi568815575f:130072063_130284737|GENSCAN_predicted_CDS_8|840_bp
atgggaacactggacataggggctgacaacctgagtgggaatttctggtctaccacttcc
tggctgccaaatctgcgggggcgggggccgcttaccgagagcagagcagatcggtctgac
tggggttcggataaggaggaggagaaagaggaggaggaaagggaggagcgcgaaaaacct
caggcgacagcctcagcaacagcgactcccccggagacttccagcgcggaaccggcgtct
cagccgggggcagaagtatataactgcacgcgctgcctcatgggtagacgccgactccac
cccctgaacatccggggccttttaaccgcccacggacggacggctgtgtcacgagtgtcc
acatccaacctaaaattacgaggaggaatggtcaaactgcctcagcaggatgaccagaaa
acacttatacacccaaatttcaatctaacttattctttttttcgtgaaaaatacagccaa
gaagaccagcgggctctgacattagacataagctccgaaagctacaaatggggccacaaa
ctaatcaaaatcagcttcctgataccacctttatggtgtataacaattgtgacctggagg
aaggaaaaaagggaacagaatgaagaaaaatggcaagccagaattacggcagccatcatt
ggcgatgccttgaatgctcaaagagcatctaagggaaatccaaagggcaataaggataat
gccagcaaaggctcttgcttcaaatgcaagaaaaatgggcactgggcaaaggaatgtagt
aagcccctgccaggcccctactgtcaatgcgaaggcaccagttgtggcccctggcactag