GENSCAN 1.0	Date run:  8-Nov-116	Time: 15:27:20

Sequence gi568815575r:120526213_120727166 : 200954 bp : 40.24% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.24 PlyA -    434    429    6                              -1.75
 1.23 Term -    644    549   96  2  0   77   39   128 0.943   3.79
 1.22 Intr -   4042   3890  153  1  0   33  100   117 0.953   6.75
 1.21 Intr -   6382   6210  173  2  2   97   20   131 0.992   5.94
 1.20 Intr -   8374   8269  106  1  1  101   58    69 0.996   4.07
 1.19 Intr -   9731   9618  114  2  0   77  107    15 0.801   2.02
 1.18 Intr -  10822  10715  108  1  0   62   94    62 0.927   3.76
 1.17 Intr -  11263  11202   62  2  2  118   60    48 0.421   2.53
 1.16 Intr -  12558  12448  111  1  0   66   78   103 0.989   6.53
 1.15 Intr -  13160  13056  105  0  0   82  115    87 0.998  10.07
 1.14 Intr -  14350  14158  193  1  1   53   77   166 0.998  10.14
 1.13 Intr -  15508  15390  119  2  2   48   62   105 0.993   3.16
 1.12 Intr -  16821  16754   68  2  2  124   86    32 0.993   4.23
 1.11 Intr -  17597  17515   83  2  2   44  100    81 0.998   2.42
 1.10 Intr -  17991  17902   90  0  0  118   53   107 0.999   9.47
 1.09 Intr -  18431  18269  163  1  1   70  108   103 0.336   9.56
 1.08 Intr -  28741  28665   77  1  2   70   49    41 0.080  -4.21
 1.07 Intr -  31827  31712  116  1  2   58   91   128 0.966   9.35
 1.06 Intr -  34413  33871  543  1  0  110   86   412 0.992  35.14
 1.05 Intr -  34510  34470   41  0  2  130   61    47 0.821   3.15
 1.04 Intr -  34786  34626  161  1  2  104   -2   134 0.585   3.86
 1.03 Intr -  40608  40479  130  2  1   86   41    55 0.279   0.38
 1.02 Intr -  42349  42253   97  2  1   16  105    31 0.066  -4.25
 1.01 Init -  48465  48339  127  0  1   53   89   115 0.674   8.47
 1.00 Prom -  48520  48481   40                              -8.95

 2.00 Prom +  49004  49043   40                              -9.45
 2.01 Init +  49676  49731   56  1  2   70   81     8 0.153  -0.69
 2.02 Term +  55670  55994  325  2  1   16   52   910 0.981  73.45
 2.03 PlyA +  56136  56141    6                               1.05

 3.04 PlyA -  59547  59542    6                               1.05
 3.03 Term -  77934  77798  137  1  2  -44   48   265 0.041   6.50
 3.02 Intr -  88500  88429   72  1  0   81  100    50 0.034   3.96
 3.01 Init -  91447  91384   64  1  1   53   37    43 0.035  -2.94
 3.00 Prom -  91943  91904   40                              -5.05

 4.05 PlyA -  92491  92486    6                               1.05
 4.04 Term - 100959  99998  962  1  2   98   54   435 0.065  32.33
 4.03 Intr - 103588 103506   83  0  2   44   15    33 0.030 -10.04
 4.02 Intr - 103834 103705  130  2  1   71  100   128 0.175  11.13
 4.01 Init - 110518 110449   70  1  1   90   74    18 0.067   1.89
 4.00 Prom - 121296 121257   40                              -3.45

 5.02 PlyA - 121784 121779    6                               1.05
 5.01 Sngl - 130028 129609  420  2  0   36   48   214 0.924   8.25
 5.00 Prom - 133772 133733   40                              -0.65

 6.03 PlyA - 134102 134097    6                               1.05
 6.02 Term - 134574 134466  109  2  1   88   47    64 0.156  -0.70
 6.01 Init - 149708 149509  200  2  2   72    9   206 0.529   9.52
 6.00 Prom - 155185 155146   40                              -5.95

 7.07 PlyA - 155437 155432    6                               1.05
 7.06 Term - 157979 157631  349  1  1   73   43   123 0.076  -0.73
 7.05 Intr - 170285 170148  138  1  0   25   93    85 0.230   1.36
 7.04 Intr - 170583 170393  191  0  2   70   76   143 0.443   8.76
 7.03 Intr - 170816 170759   58  1  1   90   61    32 0.381  -1.33
 7.02 Intr - 178913 178730  184  0  1   58   91   138 0.011   9.02
 7.01 Init - 189889 189583  307  1  1   85   37    98 0.031   1.92

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 173037 173645  609  2  0   88   54   224 0.960  14.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:120526213_120727166|GENSCAN_predicted_peptide_1|1011_aa
MGEDCWKSEFSVFYRRPKGRMMSQSSGSGDGNDDEATTSKDGGIGERNNAVGGNKGHLVI
EAGKIHDLVIETSLRWFTGMTDKISELRNEVLEWLMYQVSNFRRCKINNFAKNMKFGWGE
GEKEEELQPHRLAESLLQKGGERDRKAGEGDGTAVYLSASSFALPPRSAHSCIATFSPTR
TQAYKRFSSPSPSAAAAAQEVRSATDGNTSTTPPTSAKKRKLNSSSSSSSNSSNEREDFD
STSSSSSTPPLQPRDSASPSTSSFCLGVSVAASSHVPIQKKLRFEDTLEFVGFDAKMAEE
SSSSSSSSSPTAATSQQQQLKNKSILISSVASVHHANGLAKSSTTVSSFANSKPGSAKKL
VIKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQKDYFEMFKFKQEDKG
GKAISYNLDFRDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSM
LSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQ
TTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQW
IEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFINK
RPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKR
LLVGKSASVDAEKSMLSKLKHGHSLQTGSGASEKLETWAGWGYMQNQNVPGNIELTVNIL
TMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKE
LQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDI
EDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRK
TLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA

>gi568815575r:120526213_120727166|GENSCAN_predicted_CDS_1|3036_bp
atgggagaggactgctggaaaagtgaattctctgttttctatcgtagacccaaaggacgg
atgatgtcacagtcatctggatcaggagatgggaatgatgatgaggctactacctctaaa
gacggtggaattggagagagaaataatgctgttggtgggaataaaggacatttagtaata
gaagcaggaaaaatacatgacttggtaatagaaacttccctgagatggttcacaggtatg
acagataaaatctctgagctaaggaacgaagtgcttgaatggttgatgtaccaagtcagt
aacttcaggcgatgtaagataaacaattttgctaaaaatatgaaatttggctggggagag
ggagaaaaggaggaggagctgcagcctcacagactcgctgagtcgctcctgcagaaaggg
ggggagagagatcgaaaagcaggggagggggacggcacggccgtttacctgtctgcctcc
tcattcgctctcccccctcgttctgctcactcctgcattgctaccttctctcctacacgc
acgcaggcatataaacgtttttcttcccccagtccctcagctgctgctgctgctcaggag
gtcagatctgccactgatggtaataccagcaccactccgcccacctctgccaagaagaga
aagttaaacagcagcagcagtagcagcagtaacagtagtaacgagagagaagactttgat
tccacctcttcctcctcttccactcctcctttacaacccagggattcggcatccccttca
acctcgtccttctgcctgggggtttcagtggctgcttccagccacgtaccgatacagaag
aagctgcgttttgaagacaccctggagtttgtagggtttgatgcgaagatggctgaggaa
tcctcctcctcctcctcctcatcttcaccaactgctgcaacatctcagcagcagcaactt
aaaaataagagtatattaatctcttctgtggcttcggtgcatcatgcaaacggcctagcc
aaatcttctaccaccgtctctagctttgctaacagcaaacctggctctgctaagaagtta
gtgatcaagaactttaaagataagcctaaattaccagaaaactacacagatgaaacctgg
caaaaactgaaagaagcagtggaagctattcagaatagtacttcaattaagtacaattta
gaagaactctaccagaaagattattttgagatgttcaagttcaaacaggaggataaagga
ggtaaagctatttcatataatctggacttcagggacatgggactggagttatttagggct
catattataagtgatcagaaagtgcagaataagacaattgatggcattcttctcttgatt
gagagggaaaggaatggtgaagcaattgatagaagtttacttcgaagccttttaagcatg
ctgtctgatttgcaaatttatcaagattcttttgaacaacgatttttggaagaaactaac
cggctctatgcagctgaaggccaaaaattaatgcaagaaagagaggttcctgaatatcta
catcatgttaacaaacgtctagaagaagaagcagacagacttattacttacttagatcag
accacccagaagtcattaattgctactgtagaaaaacaacttctaggtgaacacttaaca
gcaattcttcagaaaggtttaaataacctccttgatgaaaaccgaattcaagatttgtct
cttctgtatcagctcttcagtagagttcgaggtggagttcaggttcttttgcagcagtgg
atcgaatatatcaaggcatttggcagcactattgtaattaatcctgaaaaagataaaacc
atggttcaagaattgctggattttaaagataaggttgaccatataattgatatctgcttt
ctgaagaatgagaaatttatcaatgccatgaaagaagcatttgaaacgttcattaacaaa
agaccaaataaaccagctgaacttatagctaagtatgtagattcaaaacttcgtgcaggc
aacaaagaagctacagatgaagaacttgagaaaatgttggataaaattatgatcatattt
agatttatctatggcaaggatgtttttgaggccttctataagaaagatttagccaagcgc
ctgttagtcggaaagagtgcatctgtagatgctgaaaaatcaatgctgtccaaacttaaa
catggtcactccctgcagacaggcagtggagcaagtgaaaaactggagacttgggctggc
tgggggtatatgcagaatcagaatgttccgggaaatattgagttaactgtgaatatcctg
acaatgggctattggccgacatatgtgcctatggaagttcatttaccaccagagatggta
aaacttcaggagattttcaagacattttacctaggcaaacatagtggcaggaaacttcag
tggcagtcaaccctaggacactgtgtgttaaaagcagaatttaaagagggtaaaaaggaa
ctccaggtctctctttttcaaacactggtgctgctaatgtttaatgagggagaggagttc
agtttagaagagatcaagcaggcaactggaatagaggatggagagttaaggagaacactg
cagtcattagcctgtggcaaagctagagttctggcgaaaaatccaaagggcaaagacatt
gaagatggtgacaagttcatttgtaatgatgatttcaaacataaacttttcaggataaag
atcaatcaaatccagatgaaagaaacggttgaagaacaagcaagcactacagaaagagta
tttcaagacagacagtatcaaattgatgctgcaattgttcgaattatgaagatgagaaag
acacttagccacaatctccttgtttcagaagtgtacaaccagttgaaatttccagtaaag
cctgctgatcttaagaagagaatagaatctttaattgaccgggactacatggaaagagat
aaagaaaatccaaaccagtacaactatattgcatag

>gi568815575r:120526213_120727166|GENSCAN_predicted_peptide_2|126_aa
MGRVRGIRFSTWSLLSGKSKKEKKKKKKKKKKKKKKKKKKKKKKKKKRKKRRREEEEKKK
KKKKKKKKKKKKKKRRRRRKEEEEEEEEEEEEEEEEEEEEEEEEEEEILSNQKPSLEEAL
SPCLSE

>gi568815575r:120526213_120727166|GENSCAN_predicted_CDS_2|381_bp
atggggagggtgaggggcatcaggttctccacgtggtctctgctgagcgggaaaagtaag
aaagagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaagaagaagaagaggaagaaaagaagaagagaagaagaagagaagaagaag
aagaagaagaagaagaagaagaagaagaagaagaagaagaaaagaagaagaagaagaaaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaggaagaagaaatcctgagtaatcagaagccttccctggaagaggccctt
tctccttgcctctctgagtga

>gi568815575r:120526213_120727166|GENSCAN_predicted_peptide_3|90_aa
MNFKGVIDYAFEVSYIHILAEKHKELQASNRVPPPPNRETSEFEARRPALTVGAVVVIRK
TRASRALRLSVKSDYFRSSGLHVGAFAGSF

>gi568815575r:120526213_120727166|GENSCAN_predicted_CDS_3|273_bp
atgaactttaagggagtaattgattatgcttttgaagtctcctatattcacatattggct
gaaaaacataaggagctacaggcctcaaatagggtgcctcctcccccaaatagggagaca
tctgaatttgaagccagaaggccggcactgacagtcggagctgtagtcgttatccggaaa
acgagagccagccgcgctttacggctctcagtcaaatctgactacttccgctcctctgga
ctccacgtaggcgcttttgccggctccttttag

>gi568815575r:120526213_120727166|GENSCAN_predicted_peptide_4|414_aa
MPCFPFTFHYDCTFPEASLAMQNSRPTREHRLQLEQPGQERNGVVRQRERKPVRGCAFLS
PSRSRRGCSGRIVSTGDRESSSWGRSLGPSEGYRGKMLSESSSFLKGVMLGSIFCALITM
LGHIRIGHGNRMHHHEHHHLQAPNKEDILKISEDERMELSKSFRVYCIILVKPKDVSLWA
AVKETWTKHCDKAEFFSSENVKVFESINMDTNDMWLMMRKAYKYAFDKYRDQYNWFFLAR
PTTFAIIENLKYFLLKKDPSQPFYLGHTIKSGDLEYVGMEGGIVLSVESMKRLNSLLNIP
EKCPEQGGMIWKISEDKQLAVCLKYAGVFAENAEDADGKDVFNTKSVGLSIKEAMTYHPN
QVVEGCCSDMAVTFNGLTPNQMHVMMYGVYRLRAFGHIFNDALVFLPPNGSDND

>gi568815575r:120526213_120727166|GENSCAN_predicted_CDS_4|1245_bp
atgccttgcttccccttcaccttccactatgattgtacgtttcctgaggcttctctagcc
atgcagaactcgagaccaacgagagaacaccgcctgcagctagaacagcctggtcaggag
cgtaacggagtggtgcgccaacgtgagaggaaacccgtgcgcggctgcgctttcctgtcc
ccaagccgttctagacgcgggtgcagcgggaggattgtcagcacaggagaccgagagtct
tcttcctgggggcgctctcttggtccctcagagggatatcgaggaaaaatgctttctgaa
agcagctcctttttgaagggtgtgatgcttggaagcattttctgtgctttgatcactatg
ctaggacacattaggattggtcatggaaatagaatgcaccaccatgagcatcatcaccta
caagctcctaacaaagaagatatcttgaaaatttcagaggatgagcgcatggagctcagt
aagagctttcgagtatactgtattatccttgtaaaacccaaagatgtgagtctttgggct
gcagtaaaggagacttggaccaaacactgtgacaaagcagagttcttcagttctgaaaat
gttaaagtgtttgagtcaattaatatggacacaaatgacatgtggttaatgatgagaaaa
gcttacaaatacgcctttgataagtatagagaccaatacaactggttcttccttgcacgc
cccactacgtttgctatcattgaaaacctaaagtattttttgttaaaaaaggatccatca
cagcctttctatctaggccacactataaaatctggagaccttgaatatgtgggtatggaa
ggaggaattgtcttaagtgtagaatcaatgaaaagacttaacagccttctcaatatccca
gaaaagtgtcctgaacagggagggatgatttggaagatatctgaagataaacagctagca
gtttgcctgaaatatgctggagtatttgcagaaaatgcagaagatgctgatggaaaagat
gtatttaataccaaatctgttgggctttctattaaagaggcaatgacttatcaccccaac
caggtagtagaaggctgttgttcagatatggctgttacttttaatggactgactccaaat
cagatgcatgtgatgatgtatggggtataccgccttagggcatttgggcatattttcaat
gatgcattggttttcttacctccaaatggttctgacaatgactga

>gi568815575r:120526213_120727166|GENSCAN_predicted_peptide_5|139_aa
MASVQHLKTFGRFSRYHRSCLKDCSKIAKLINELIQDGQVRIGAHIRKGCGVEEEGRSRY
KMPGPDSEEECLRLNYVAYQNKAALTEGSPRKQTNRRRSFHLGKLLSCAPPLTSTFWKLS
TCLAQGSVLAYAVHYLQDL

>gi568815575r:120526213_120727166|GENSCAN_predicted_CDS_5|420_bp
atggccagtgttcaacatttaaagacatttgggagattcagcagataccacaggagctgt
ttgaaggactgttcaaagattgcaaagctcatcaatgagttgattcaggatggtcaggtc
agaattggagcacacattagaaagggctgtggagttgaagaggaagggagaagcaggtac
aaaatgccagggcctgacagtgaggaagagtgtttgcggctcaactacgtggcctatcaa
aataaagctgcccttactgagggatcccccagaaagcaaactaacagacgaaggagtttt
cacctgggcaaacttctctcatgtgctcctcctcttacttcaacattttggaaattgtca
acctgcttggctcaaggttctgttttagcatatgctgtccactacctccaagacctttga

>gi568815575r:120526213_120727166|GENSCAN_predicted_peptide_6|102_aa
MVDPPIAYTVHLEKLQTMPAHESNWKWGCTLQSHRVELPKTMRANLLHQCALDVTHGVKG
DHFETLRPRVKGAAMIRSPDHWSHVTGNIHMQDIKGKTWKDR

>gi568815575r:120526213_120727166|GENSCAN_predicted_CDS_6|309_bp
atggtagatccaccaatagcttacaccgtgcacctggaaaagctgcagacaatgccagcc
catgaaagcaactggaagtggggctgtaccctgcaaagccacagggtggagctgcccaag
accatgagagccaacctcttgcatcagtgtgccctggatgtaacacatggagtcaaagga
gatcattttgaaactttaagaccaagagtgaaaggagctgcaatgatcaggagcccagac
cattggtcccacgtaactggtaacatccacatgcaggacataaaggggaaaacttggaaa
gacagatga

>gi568815575r:120526213_120727166|GENSCAN_predicted_peptide_7|408_aa
MDNVCHSSIMWYQLGQLNWELEDLYPRWLTSIGWQSGIGCQVGVQPGWKARSLDSSPQEP
LHGLSHSMWLDSKNKHSQNRKMPVSSDIGPETDTVSLLPYSIGLLRPFNMIINIVNLQEG
FECALVLKLTLAQNPPFNEEHVSGLMFPKAQFEKQDFRKIDLARGGYVSEVFFVLKLWGV
IQQLWGNLRAAKEEILVMVVAQGRLLDSWGLYAREMQVSNCSVQSAQDGGFVLWTQARGS
LPGDEPRLRVARAVAEKLSNAPGGSAQGAAEFVLAQELWWQGVWRPRPGEPARRLNGQRW
SPSNTGLSRETRKRLKILCLPPHQPREGEVCAGGAEQSARKERPPPPPSPKSQESQAEAT
STSNAGNTKEETGLQATELSTPSSQRPAPTPRVRKHNEELGWEHTSDC

>gi568815575r:120526213_120727166|GENSCAN_predicted_CDS_7|1227_bp
atggacaatgtttgtcacagtagtatcatgtggtatcagctggggcagctcaactgggag
ctagaggacctgtatccaagatggctcactagcattggctggcaaagtggtattggctgt
caggtgggagtccagccagggtggaaagccaggagccttgattcctctccacaggaacct
ctgcatgggctttctcacagcatgtggctggattccaagaacaaacactcccagaatagg
aagatgccagtttcttcagatataggcccagaaactgacacagtgtcacttctaccatat
tctattggacttctcagaccctttaacatgataataaacatagtgaatcttcaggaggga
tttgaatgtgccctggttcttaaactcacattagcacaaaatcctccttttaatgaggag
catgtatcagggctaatgtttcccaaagcacagtttgagaaacaggattttaggaagatt
gatctggcaagagggggatatgttagtgaagtatttttcgtgttgaagctttggggtgtg
atccagcagctctggggcaatctcagagctgctaaggaagagatcttagtaatggttgtg
gcccagggtcgtttgctcgactcctggggcctctatgccagagagatgcaggtcagcaat
tgctcagtgcagtcagcccaagatggagggtttgtgctgtggacccaagctaggggttcc
ctgcctggtgatgagccacgtctgagggtggcaagggcagtggcagagaagctttcaaat
gcccctggaggatctgcacagggagctgctgagtttgtactggctcaagagctctggtgg
cagggtgtctggaggcccaggcctggagaacctgcccgcagactgaatggacaaagatgg
agtccttcaaatacaggcctttcaagagaaaccagaaagaggttgaagatattgtgtctc
ccacctcaccaaccaagagaaggggaagtttgtgctggtggtgctgaacagtctgccagg
aaggaaaggccaccgccaccaccttctcccaagagccaggagtcccaagcagaggctacc
tctaccagtaatgctggaaacacaaaagaagagacagggctccaagccacagaattgtcc
accccctcaagccagagaccagcaccgacaccaagggtcaggaagcacaatgaagagctg
ggttgggagcacacaagtgattgctaa