GENSCAN 1.0	Date run:  6-Nov-116	Time: 02:22:48

Sequence gi568815575f:50810784_51016604 : 205821 bp : 39.91% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 Intr -   2511   2351  161  1  2   86    9   293 0.077  19.99
 1.02 Intr -   2897   2642  256  2  1   -5   46   316 0.758  14.19
 1.01 Init -   3235   3119  117  1  0   80  116    80 0.997  10.28
 1.00 Prom -   4854   4815   40                              -4.45

 2.00 Prom +   7522   7561   40                              -5.65
 2.01 Init +  17827  17981  155  0  2   79   47   106 0.581   5.10
 2.02 Intr +  28992  29216  225  0  0   99   61   122 0.693   6.78
 2.03 Intr +  29341  29468  128  1  2   97   93    25 0.711   3.30
 2.04 Term +  30923  31005   83  0  2   54   55    77 0.546  -2.12
 2.05 PlyA +  32846  32851    6                               1.05

 3.05 PlyA -  33602  33597    6                               1.05
 3.04 Term -  40024  39792  233  2  2   47   37   197 0.223   6.15
 3.03 Intr -  42286  42107  180  2  0   15   99    75 0.063   0.22
 3.02 Intr -  59187  59086  102  1  0   84   51    76 0.025   2.73
 3.01 Init -  61913  61832   82  2  1   94    5    83 0.311   1.78
 3.00 Prom -  68861  68822   40                              -2.35

 4.00 Prom +  83123  83162   40                              -5.05
 4.01 Init +  84901  84925   25  0  1  106   98    -2 0.295   2.34
 4.02 Term +  94608  95083  476  1  2  101   47   419 0.900  33.16
 4.03 PlyA +  96493  96498    6                               1.05

 5.00 Prom +  97539  97578   40                              -9.45
 5.01 Init + 100001 100328  328  1  1   73  105   309 0.841  28.63
 5.02 Term + 104974 105824  851  2  2  133   48   538 0.971  46.32
 5.03 PlyA + 106919 106924    6                               1.05

 6.03 PlyA - 107064 107059    6                               1.05
 6.02 Term - 116584 116345  240  1  0   48   47   151 0.788   2.04
 6.01 Init - 120559 120173  387  1  0   99   85   379 0.948  35.55
 6.00 Prom - 128096 128057   40                              -2.75

 7.04 PlyA - 128192 128187    6                               1.05
 7.03 Term - 134242 134012  231  1  0   32   39   119 0.043  -3.11
 7.02 Intr - 141939 141723  217  2  1   85  110   114 0.369  10.88
 7.01 Init - 152671 152571  101  1  2   43   79    61 0.060   0.52
 7.00 Prom - 157474 157435   40                              -4.95

 8.00 Prom + 169320 169359   40                              -6.15
 8.01 Init + 172251 172310   60  2  0   88   37    76 0.433   3.80
 8.02 Intr + 172998 173294  297  2  0  124   36   243 0.578  18.85
 8.03 Term + 180109 180183   75  0  0   86   43    73 0.126  -0.54
 8.04 PlyA + 180444 180449    6                               1.05

 9.04 PlyA - 180539 180534    6                               1.05
 9.03 Term - 184371 184277   95  1  2   69   48   115 0.038   2.61
 9.02 Intr - 191723 191644   80  1  2   86   56    93 0.025   4.18
 9.01 Init - 198418 198270  149  1  2   83   23    96 0.288   2.21
 9.00 Prom - 202360 202321   40                              -3.65

10.03 PlyA - 202644 202639    6                              -0.45
10.02 Term - 204000 202701 1300  2  1   10   49   306 0.714   8.96
10.01 Intr - 204595 204206  390  0  0   40   69   285 0.607  14.71

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -   2511   2336  176  1  2   86   49   261 0.915  18.94
S.002 Term + 122816 123084  269  0  2   55   49   230 0.964  10.47


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:50810784_51016604|GENSCAN_predicted_peptide_1|178_aa
MENRPGSFQYVPVQLQGGAPWGFTLKGGLEHCEPLTVSKNLARRHTREGAGAALAAPRRG
GYFPQFGPKEVEAVGDFSLEASASLRDSEGLKGQSSRLGSSLGSVVPSIDRRAVPPRQVA
GLGAESCPSAGEISCTLRSVEETCAMERSCAGATAVAAAAAAAAAAAAATAAAAAAAR

>gi568815575f:50810784_51016604|GENSCAN_predicted_CDS_1|534_bp
atggagaaccggcctgggtccttccagtacgtccctgtgcagctgcaagggggggcaccc
tggggcttcacccttaaggggggtctggaacactgtgagccgctcacagtgtctaagaac
cttgcgcgcagacacactcgcgagggcgctggggcagcccttgctgccccacgtcggggc
ggctacttccctcagtttgggccgaaggaagtggaggctgttggggatttctccttggag
gcctctgcgtccctgcgggacagtgaaggactgaagggacagtcatcgcggcttggcagc
tctcttggcagcgttgtcccctctatcgaccggcgggccgtccctcccaggcaggttgca
gggctaggggctgagtcctgccccagcgccggcgagatttcctgcacgttgagaagtgtg
gaggaaacttgcgccatggagcgcagctgtgctggagctactgctgttgctgctgccgct
gccgccgccgccgccgccgccgccgccactgccgccgccgccgccgccgccagg

>gi568815575f:50810784_51016604|GENSCAN_predicted_peptide_2|196_aa
MAKIAIKNYRFASYHLATPVETQIHFLKSPSESSRIEYMSEPTTMTKETESRIKAQIQDG
GQGRWPQCGLGTLTAAGEAAHVSLGRQRFRSPILDPTGFPWPPRDQAGLELGSQETDRAD
PRHQSVRFPSPAFLPSAPHVSSKWARMDLEAPFLSLQAQDSTCQNVLSAEVEGTLFSLAL
DHEIRICYTLRKEEKA

>gi568815575f:50810784_51016604|GENSCAN_predicted_CDS_2|591_bp
atggccaagatagccatcaagaactatagatttgcatcttaccatttagcaaccccagtg
gaaacacagatccattttcttaaaagtcccagcgaaagttccagaattgagtacatgtct
gaaccaaccacaatgaccaaagaaacagaatctaggattaaagctcagattcaggatggt
gggcaggggagatggccacagtgtggacttgggaccctgactgctgctggagaagcagcc
catgtgtctttgggaagacagaggttccggtctcccatcctggaccccacaggcttccct
tggccacccagggatcaggcaggactagagctgggcagccaagagacagacagagctgac
ccaaggcaccagagtgtcaggtttccctccccagccttcctgcccagtgctccccatgta
tcttccaagtgggctaggatggatctggaagctcccttcctctctctgcaggcacaggat
tccacttgtcagaacgttctttctgctgaagtggaagggactctgtttagccttgccctt
gaccatgaaattcgaatatgctacacattgagaaaagaggagaaggcctga

>gi568815575f:50810784_51016604|GENSCAN_predicted_peptide_3|198_aa
MSERESSGEEDKESSSSPATLVLKKEGTRLLFPKQNTLNSFSQSSSMPKELMLILVSEKY
YINENPVLNSRARGCFSGKTPEYSLDRLSAAELRGETLIATVHIHVCARSVQTAQRTEWE
AGSGQGEPTGRLQIWELVWDCPCGYLPMVHRHPPGDGSRGQPKWPPSSLGLGSDSGSLLM
LYLVLLTQCALDLIAMEK

>gi568815575f:50810784_51016604|GENSCAN_predicted_CDS_3|597_bp
atgagcgagagagagagcagtggggaggaggataaggagtcaagcagcagtccagcaact
ctggttctcaagaaggaagggactaggcttctcttccctaaacaaaatactctcaactct
ttcagccagtcttcatcaatgccaaaggagttgatgctgatactggtgtctgagaagtac
tacattaatgaaaatcctgtactgaatagcagggcaagggggtgtttctcaggtaaaacc
cctgagtatagtttggatcgtctgagtgcagcagagttaaggggtgagaccttaatagcc
acagtgcatatacatgtatgtgcccgaagtgttcagacagctcagagaactgaatgggag
gctggcagtgggcaaggtgaacccactgggcggttacaaatttgggagctcgtctgggat
tgcccttgtggctacctgcccatggttcatcgccatccacctggcgatggatccagaggc
cagcccaagtggccacctagttctcttggactggggtctgactctggttctctacttatg
ctctatctggtgctgctgacccaatgtgcattggatttaattgcaatggagaaatag

>gi568815575f:50810784_51016604|GENSCAN_predicted_peptide_4|166_aa
MDLTGDHWELHLKQKGDNEGGLYTMARTRWTARKSTGGIAPRKQLATKATCKSAPSTGGV
KKPHRYRPGTVALREIRHYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQRAAIGTLQEA
SEAYLVGLFEDTNLCAIHATRVTIMPKDIQLARHIRGERVSEYTMM

>gi568815575f:50810784_51016604|GENSCAN_predicted_CDS_4|501_bp
atggatttaactggagatcactgggagctccacctgaagcagaagggggataacgaagga
ggtctctataccatggctcgtacaaggtggactgcccgcaaatctaccggtggtatagca
cccaggaagcaactggctacaaaagccacttgtaagagtgcgccctctactggaggggtg
aagaaacctcatcgttacagacctggtactgtggcactccgtgaaattagacattatcag
aagtccactgaacttctgattcgcaaacttcccttccagcgtctggtgcgagaaatcgct
caggactttaaaacagatctgcgcttccagagggcagctatcggtactttgcaggaggca
agtgaggcctatctagttggcctttttgaagacaccaacctgtgtgctatccatgccaca
cgtgtaacaattatgccaaaagacatccagctagcacgccacatacgtggagaacgtgtt
tcagaatacaccatgatgtga

>gi568815575f:50810784_51016604|GENSCAN_predicted_peptide_5|392_aa
MVLLSILRILFLCELVLFMEHRAQMAEGGQSSIALLAEAPTLPLIEELLEESPGEQPRKP
RLLGHSLRYMLELYRRSADSHGHPRENRTIGATMVRLVKPLTNVARPHRGTWHIQILGFP
LRPNRGLYQLVRATVVYRHHLQLTRFNLSCHVEPWVQKNPTNHFPSSEGDSSKPSLMSNA
WKEMDITQLVQQRFWNNKGHRILRLRFMCQQQKDSGGLELWHGTSSLDIAFLLLYFNDTH
KSIRKAKFLPRGMEEFMERESLLRRTRQADGISAEVTASSSKHSGPENNQCSLHPFQISF
RQLGWDHWIIAPPFYTPNYCKGTCLRVLRDGLNSPNHAIIQNLINQLVDQSVPRPSCVPY
KYVPISVLMIEANGSILYKEYEGMIAESCTCR

>gi568815575f:50810784_51016604|GENSCAN_predicted_CDS_5|1179_bp
atggtcctcctcagtattcttagaattctttttctttgtgaactcgtgcttttcatggaa
cacagggcccaaatggcagaaggagggcagtcctctattgcccttctggctgaggcccct
actttgcccctgattgaggagctgctagaagaatcccctggcgaacagccaaggaagccc
cggctcctagggcattcactgcggtacatgctggagttgtaccggcgttcagctgactcg
catgggcaccctagagagaaccgcaccattggggccaccatggtgaggctggtgaagccc
ttgaccaatgtggcaaggcctcacagaggtacctggcatatacagatcctgggctttcct
ctcagaccaaaccgaggactataccaactagttagagccactgtggtttaccgccatcat
ctccaactaactcgcttcaatctctcctgccatgtggagccctgggtgcagaaaaaccca
accaaccacttcccttcctcagaaggagattcctcaaaaccttccctgatgtctaacgct
tggaaagagatggatatcacacaacttgttcagcaaaggttctggaataacaagggacac
aggatcctacgactccgttttatgtgtcagcagcaaaaagatagtggtggtcttgagctc
tggcatggcacttcatccttggacattgccttcttgttactctatttcaatgatactcat
aaaagcattcggaaggctaaatttcttcccaggggcatggaggagttcatggaaagggaa
tctcttctccggagaacccgacaagcagatggtatctcagctgaggttactgcctcttcc
tcaaaacatagcgggcctgaaaataaccagtgttccctccaccctttccaaatcagcttc
cgccagctgggttgggatcactggatcattgctccccctttctacaccccaaactactgt
aaaggaacttgtctccgagtactacgcgatggtctcaattcccccaatcacgccattatt
cagaaccttatcaatcagttggtggaccagagtgtcccccggccctcctgtgtcccgtat
aagtatgttccaattagtgtccttatgattgaggcaaatgggagtattttgtacaaggag
tatgagggtatgattgctgagtcttgtacatgcagatga

>gi568815575f:50810784_51016604|GENSCAN_predicted_peptide_6|208_aa
MAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDVAKK
LGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEED
KMRNMKIKKANLSGPRLWTTLSAKPAPGFGPTPVPGKPPSDPVSRHIQGQSQSQDSRPQT
SPSTLAQDSIHSPSLQASTNKPILQASP

>gi568815575f:50810784_51016604|GENSCAN_predicted_CDS_6|627_bp
atggcccattatgaaagagaaatgaaaatctatatccctccaaaagcagagaccaaaatg
aagttcgaagatcccaatgcacccaagagccctcctttggcctttttcatgttctcttct
gaggattgcccaaaaatcaaagaacatcctggcctatcaattagtgatgttgcaaaaaaa
ctgggagagatgtggaattacattgctgaagatgacaagcacccttatgaaaagaaggct
gtgaagctgaaggaaaaatatgaaaaggatattgctgcatttggaggtaaaggaaaacct
gatgctgcaaaaaagggagccatcaaggctgaaaaatgcaagaaaaagaaggaagaggac
aaaatgaggaatatgaaaattaaaaaggcaaacctcagtggccccaggctctggaccacc
ctcagtgccaagccagcaccaggctttgggcccacaccagtgccaggcaagcccccctca
gacccagtctccaggcacatccagggccaaagccaatcccaggactctaggcctcaaact
tcacccagcaccctagcacaggacagcatccacagccctagtcttcaggccagcaccaat
aaacccatcctccaggccagcccctga

>gi568815575f:50810784_51016604|GENSCAN_predicted_peptide_7|182_aa
MKDPILLDLLSFSLAGFEEASFHVVRQLMERAMCCFSSLREFLVRFRKDKAFVLLLQRIT
QQVKTENHTSLEQVHTASSGTRNPPQECGLTSSRLPLSQGKGDQARCNHKKYITQIPIEK
HSPKFLTSAPQNCQHHQKQGKSENLSQPKGAPGDMMTKGTVLSWMGSWNRKKSIQSKLRK
SE

>gi568815575f:50810784_51016604|GENSCAN_predicted_CDS_7|549_bp
atgaaagaccccatcttgctagacttgctgtctttctctcttgctggctttgaagaagca
agtttccatgttgtgaggcagcttatggagagggctatgtgttgcttctcttccctgaga
gaattcctggttaggttccgtaaagataaggcctttgtgttactccttcagagaatcacc
caacaggtcaaaacagaaaaccatacttctttagaacaagttcatactgcttcctctggc
accagaaacccaccacaggaatgtgggctgacatcttccagactgccactgagccaggga
aagggggatcaggcaaggtgtaatcataagaagtatatcacacaaatcccaattgagaaa
cattctccaaaattcctaacaagtgcacctcaaaattgtcagcatcatcagaaacaagga
aagtctgagaacctgtcacagccaaaaggagccccaggagacatgatgactaaaggcact
gtgttgtcttggatgggatcctggaacagaaaaaaaagcattcagtcaaaactaagaaaa
tctgaataa

>gi568815575f:50810784_51016604|GENSCAN_predicted_peptide_8|143_aa
MADSCRSSQAQASCFMDKGHVIKLQVAMQPEPLMMAPSAGNLTQASEGALTAVSPKQHPC
QQEAVKIGLHTYPYSKGSWMCFFRGANEAAKWEGVPGKTPTSLHTGVEPWEVHAICNREI
NPDDWQHTSNFTLIVGEIHQGPF

>gi568815575f:50810784_51016604|GENSCAN_predicted_CDS_8|432_bp
atggctgattcctgccgatcaagccaagcccaagcttcttgtttcatggataaaggccac
gtcatcaaactccaagtggccatgcaaccagagcctctgatgatggccccttctgctggg
aaccttacacaggcctctgagggagctttaactgccgtttccccaaaacagcacccctgt
cagcaggaagcagttaagatcggtcttcatacttatccttattctaagggcagttggatg
tgcttctttagaggggcgaatgaggcagccaagtgggagggggtccctggaaaaactcca
accagcctgcacactggggtggagccttgggaagttcatgccatttgcaacagggagata
aacccagatgactggcagcacactagtaatttcaccctcattgtaggtgaaattcaccaa
ggacctttttaa

>gi568815575f:50810784_51016604|GENSCAN_predicted_peptide_9|107_aa
MDEAGSYHSQQTNTGTENQTLHVVIHKWELNNENIWAQEGEHHTPGPVEGGKGKGPRSGH
EAPLHLALTLSWIPQASNWLLPREARGREVVLLKPKFKWKEVAYLVS

>gi568815575f:50810784_51016604|GENSCAN_predicted_CDS_9|324_bp
atggatgaagctggaagctatcattctcagcaaactaacacaggaacagaaaaccaaaca
ctgcatgttgtcattcataagtgggagttgaacaatgagaacatatgggcacaggaaggg
gaacatcacacaccagggcctgtcgaggggggaaagggcaaagggccacgaagcggtcat
gaggctcctctccacctggcattgaccctcagctggattccacaggcatcaaactggctg
ctcccaagagaagcccgtggccgagaagttgtcctgctgaaaccaaaattcaagtggaag
gaggtggcttacttggtgtcatag

>gi568815575f:50810784_51016604|GENSCAN_predicted_peptide_10|563_aa
XLNQEETERLNRPITGSEIEAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSI
EKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILDKILANRIQQHIKKLI
HHDQVGFIPGIQYHTEWAKTGSIPFENWHKTGMPSLTILFNIVLEVLTRAIRQEKEIKGI
QLGNEEVKLSLFPDNMIVYLENPIVSAQNLLKLIGNFSKVSGYKINVQKSQAFLYTNNRQ
TESQIMSELPFTIASKRVKYLGIQLTRDVKDLFKENYKPLLNEIKEDTKKCKNIPCSWVG
RIYIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRACIAKSILSQKNKAG
GITLPDFKLYYKAIVTKTAWYWYQNRDIDQWNRTEPSEVMSHIYNHLIFDKPDKNKKWGK
DSLFNKWCWENWLAVCRKVKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDI
GMGKDFMSKTPKAMATKAKIDKWDLIQLKSFCTAKETIIRVNRQPTEWEKIFVIYSSDKG
LISRIYNELKQIYKKKTTPSKSG

>gi568815575f:50810784_51016604|GENSCAN_predicted_CDS_10|1692_bp
nnactaaaccaggaagaaactgaacgtctgaatagaccaataacaggctctgaaattgag
gcaataattaatagcttaccaaccaaaaaaagtccaggaccagatggattcacagccgaa
ttctaccagaggtacaaggaggaactggtaccattccttctgaaactattccaatcaata
gaaaaagagggaatcctccctaactcattttatgaagccagcatcatcctgataccaaag
cctggcagagacacaacaaaaaaagagaattttagaccaatatccctgatgaatatcgat
gcaaaaatcctcgataaaatactggcaaaccgaatccagcagcacatcaaaaagcttatc
caccatgatcaagtgggcttcatccctgggatccaatatcatactgaatgggcaaaaact
ggaagcattccctttgaaaactggcacaagacagggatgccgtctctcaccattctattc
aacatagtattggaagttctgaccagggcaatcaggcaggagaaggaaataaagggtatc
caattaggaaacgaggaagtcaaattgtccctgtttccagataacatgattgtatatcta
gaaaaccccattgtctcagcccaaaatctccttaagctgataggcaacttcagcaaagtc
tcaggatacaaaattaatgtgcaaaaatcacaagcattcttatacaccaataacagacaa
acagagagtcaaatcatgagtgaactcccattcacaattgcttcaaagagagtaaaatac
ctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactg
ctcaatgaaataaaagaggatacaaagaaatgtaagaacattccatgctcatgggtggga
agaatctatatcgtgaaaatggccatattgcccaaggtaatttatagattcaatgccatc
cccatcaagctaccaatgactttcttcacagaattggaaaaaactactttaaagttcata
tggaaccaaaaaagagcatgcattgccaagtcaatcctaagccaaaagaacaaagctgga
ggcatcacgctacctgacttcaaactatactacaaggctatagtaaccaaaacagcatgg
tactggtaccaaaacagagatatagaccaatggaacagaacagagccctcagaagtaatg
tcgcatatctacaaccatctgatctttgacaaacctgacaaaaacaagaaatggggaaag
gattccctatttaataaatggtgctgggaaaactggctagccgtatgtagaaaggtgaaa
ctggatccctttcttacaccttatacaaaaattaattcaagatggattaaagacttaaat
gttagacctaaaaccataaaaaccctagaagaaaacctgggcaataccattcaggacata
ggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaatt
gacaaatgggatctaattcaactaaagagcttctgcacagcaaaagaaactatcatcaga
gtgaacaggcaacctacagaatgggaaaaaatttttgtaatctactcatctgacaaaggg
ctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaccccatca
aaaagtgggtga