GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:53:17

Sequence gi568815575r:30971405_31171953 : 200549 bp : 39.74% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  50299  50487  189  0  0  102   47   153 0.917   9.07
 1.02 PlyA +  51490  51495    6                               1.05

 2.03 PlyA -  51850  51845    6                               1.05
 2.02 Term -  59207  59057  151  1  1  151   38    89 0.775   6.60
 2.01 Init -  61230  61175   56  0  2   70   94    26 0.770   2.21
 2.00 Prom -  64712  64673   40                              -5.55

 3.00 Prom +  64869  64908   40                              -5.75
 3.01 Init +  65053  65122   70  0  1   81   91    69 0.837   7.77
 3.02 Intr +  65811  65989  179  1  2   26   51   109 0.212  -0.28
 3.03 Intr +  78403  78501   99  0  0   66  103    52 0.040   3.89
 3.04 Term +  82365  82388   24  2  0  146   47    15 0.054   0.45
 3.05 PlyA +  82497  82502    6                               1.05

 4.04 PlyA -  83373  83368    6                               1.05
 4.03 Term -  88882  88644  239  2  2   58   42   197 0.418   7.45
 4.02 Intr -  90218  90176   43  2  1   56   93    35 0.309  -2.31
 4.01 Init -  92226  92224    3  0  0   88  101     0 0.177   1.35
 4.00 Prom -  95939  95900   40                              -4.25

 5.05 PlyA -  99492  99487    6                               1.05
 5.04 Term - 100611  99998  614  1  2   68   52   794 0.271  67.45
 5.03 Intr - 106223 106105  119  1  2   88   49    44 0.104  -0.31
 5.02 Intr - 107664 107294  371  0  2   27   50   194 0.113   2.48
 5.01 Init - 109529 108492 1038  2  0   49   41   452 0.345  30.63
 5.00 Prom - 109622 109583   40                              -6.15

 6.02 PlyA - 109791 109786    6                               1.05
 6.01 Sngl - 111035 110019 1017  2  0   83   43   788 0.988  70.57
 6.00 Prom - 120945 120906   40                              -4.25

 7.03 PlyA - 121660 121655    6                               1.05
 7.02 Term - 126158 125716  443  0  2   41   44   263 0.505  11.63
 7.01 Init - 136540 136462   79  1  1   92   14   124 0.313   6.76
 7.00 Prom - 150084 150045   40                              -4.95

 8.00 Prom + 152789 152828   40                              -3.85
 8.01 Init + 155798 155847   50  1  2   61  107    40 0.492   3.67
 8.02 Term + 155919 156051  133  0  1   66   32   104 0.575  -0.82
 8.03 PlyA + 157541 157546    6                               1.05

 9.07 PlyA - 157580 157575    6                               1.05
 9.06 Term - 158190 157987  204  0  0   81   49    73 0.354  -0.91
 9.05 Intr - 161413 161250  164  2  2   96   75    90 0.577   7.27
 9.04 Intr - 162790 162698   93  2  0   66   99    97 0.977   7.62
 9.03 Intr - 174950 174887   64  2  1   80  106    89 0.533   7.27
 9.02 Intr - 176114 175871  244  1  1   58   61   358 0.998  26.68
 9.01 Intr - 198197 198039  159  1  0   70  109    72 0.126   5.68

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:30971405_31171953|GENSCAN_predicted_peptide_1|62_aa
EIALPIALMKQQEFPEGNALLTSIITISSCGASGSMKVTHPPVRVCSRTAKAAPSSRSST
LS

>gi568815575r:30971405_31171953|GENSCAN_predicted_CDS_1|189_bp
gaaattgcactgccaatagccctaatgaagcagcaggagtttcctgaggggaatgcattg
ctgacaagtataattactattagcagctgtggggcctctggctccatgaaagtaacccat
ccacctgtcagagtgtgcagcaggactgctaaagctgcacctagcagccggtccagcact
ctaagctag

>gi568815575r:30971405_31171953|GENSCAN_predicted_peptide_2|68_aa
MPASQGWISNCSLMTGAQRSDPSTSHGNNMHCIKDSILISGQWKAQCEDGETPWNIAPED
LGSNPNAH

>gi568815575r:30971405_31171953|GENSCAN_predicted_CDS_2|207_bp
atgcctgcttcccagggatggatatcaaactgttccttgatgactggagcccagaggtct
gatccctccaccagccatggtaacaatatgcactgcattaaggactctatattgatctca
gggcaatggaaagcacagtgtgaagatggggaaactccatggaatattgcaccagaagac
ttaggttcaaatcccaatgcccattag

>gi568815575r:30971405_31171953|GENSCAN_predicted_peptide_3|123_aa
MAAFDEAIYLGASRRVLKVCAREGSQAQEEGKPQNARVFKPLLESCCLAVVPLVKANHLV
QIQKIEASAPRLDGKSCDINLAREKILMDLLLLLQEGYGQILFEGVYSMTFFSPSHKLVT
TIM

>gi568815575r:30971405_31171953|GENSCAN_predicted_CDS_3|372_bp
atggctgcctttgatgaagccatttatcttggtgccagcaggagggtgttgaaagtgtgt
gcacgggaaggatctcaagcacaggaagagggcaaaccccaaaatgcaagagtcttcaag
cctctgcttgagtcatgttgcttggctgttgttccactggtcaaagcaaatcacttagtc
cagattcagaaaatagaggcaagtgccccgcgtcttgatgggaagagctgtgacatcaat
cttgcaagggaaaaaatactcatggatctcctgctgctgcttcaagaaggctatgggcag
attctgtttgaaggagtatatagcatgacttttttcagtcccagtcataaacttgtgacc
actattatgtga

>gi568815575r:30971405_31171953|GENSCAN_predicted_peptide_4|94_aa
MVPNRDLLEEKSTRKEEYKPRCQDVRVLEEHHQSPWCCQRKCLRATSKKSRACTLPFRER
TSGSALAAFTSLEKPFTVFVRRLEEGSLLATPEV

>gi568815575r:30971405_31171953|GENSCAN_predicted_CDS_4|285_bp
atggttcccaacagagacctactggaagaaaaatctactagaaaagaagaatacaagccc
agatgtcaggatgtcagagtgctagaagaacatcatcaaagcccctggtgttgccagcgc
aagtgtctcagagcaacatcaaagaaatccagggcttgtacccttcctttcagagaaaga
acatcaggctcagctctggcagcttttacctcccttgaaaaaccgttcactgtttttgtc
agacgtttggaagaaggaagtttattggcaacccctgaagtttaa

>gi568815575r:30971405_31171953|GENSCAN_predicted_peptide_5|713_aa
MGDFNTPLSTLDRSTRQKVNKDIQEFNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYS
KTDHIVGSKALLSKCKRTEIITNCLSDHSAIKLELRIKKLTQNRSTTWKLNNLLLNDYWV
HNKMKAEIKMFFETNENKDTTYQNLWDTFKAVCRGKFIALNAHKRKQGRSKIDTLTSQLK
ELEKQEQTHSKASRRQEITKIRAELKEIETQKNLQKINESRGWFFEKINKIDRLLARLIK
KKREKNQIDAIKNDKGDITTNPTEIQTTIREYYKHLYANKLENLEEMDKFLDTYTLPRLN
QEEVESLNRPITGSEIEAIINSLPTKKSPGPDGFTAEFYQRYKEELKIKYLGIQLTRDVK
DLFKENNKPLLYEIKEDTNKWKNIPCSWVGRINIVKMAILPKEIYRFNAIPIKLPMTFFT
ELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWNMDEAGNHHS
EQTIARIENQTPHVLTHRWEFNNENTWTQAAALATAPTSPVCSPALALPAMATAQPSQVR
QKYDTNCDAAINSHITLELYTSYLYLSMAFYFNRDDVALENFFRYFLRLSDDKMEHAQKL
MRLQNLRGGHICLHDIRKPECQGWESGLVAMESAFHLEKNVNQSLLDLYQLAVEKGDPQL
CHFLESHYLHEQVKTIKELGGYVSNLRKICSPEAGLAEYLFDKLTLGGRVKET

>gi568815575r:30971405_31171953|GENSCAN_predicted_CDS_5|2142_bp
atgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagttaac
aaggatatccaggaattcaactcagctctgcaccaagcggacctaatagacatctacaga
actctccaccccaaatcaacagaatatacattcttttcagcaccacaccacacctattcc
aaaactgaccacatagttggaagtaaagccctcctcagcaaatgtaaaagaacagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaaactc
actcaaaaccgctcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cataacaaaatgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagacaca
acataccagaatctctgggacacattcaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcagggaagatctaaaattgacaccctaacatcacaattaaaa
gaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaag
atcagagcagaactgaaggaaatagagacacaaaaaaaccttcaaaaaatcaatgaatcc
aggggctggttttttgaaaagatcaacaaaattgatagactgctagcaagactaataaag
aagaaaagagagaagaatcaaatagatgcaataaaaaatgataaaggggatatcaccacc
aatcccacagaaatacaaactaccatcagagaatactataaacacctctacgcaaataaa
ctagaaaatctagaagaaatggataaattcctggacacatacaccctcccaagactaaac
caggaagaagttgaatctctgaatagaccaataacaggctctgaaatcgaggcaataatt
aatagcttaccaaccaaaaaaagtccaggaccagatggattcacagccgaattctaccag
aggtacaaggaggagctgaaaataaaatacctaggaatccaacttacaagggacgtgaag
gacctcttcaaggagaacaacaaaccactgctctatgaaataaaagaggatacaaacaaa
tggaagaacattccatgctcatgggtaggaagaatcaatattgtgaaaatggccatactg
cccaaggaaatttacagattcaatgccatccccatcaagctaccaatgactttcttcaca
gaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccacattgccaag
tcaatcctaagccaaaagaacaaagctggaggtatcacactacctgacttcaaactatac
tacaaggctacagtaaccaaaacagcatggaatatggatgaagctggaaaccatcattct
gagcaaactatcgcaaggatagaaaaccaaacaccgcatgttctcactcacaggtgggaa
tttaacaatgagaacacttggacacaggctgctgccctcgctaccgcaccgacttcgccc
gtgtgctcgcctgcacttgcgctgcccgccatggccaccgcccagccgtcgcaggtgcgc
cagaagtacgacaccaactgcgacgccgccatcaacagccacatcacgctggagctctac
acctcctacctgtacctgtctatggccttctacttcaaccgggacgacgtggccctggag
aacttcttccgctacttcctgcgcctgtcggacgacaaaatggagcatgcccagaagctg
atgaggctgcagaacctgcgcggtggccacatctgccttcacgatatcaggaagccagag
tgccaaggctgggagagcgggctcgtggccatggagtccgccttccacctggagaagaac
gtcaaccagagcctgctggatctgtaccagctggccgtggagaagggcgacccccagctg
tgccacttcctggagagccactacctgcacgagcaagtcaagaccatcaaagagctgggt
ggctacgtgagcaacctgcgcaagatttgttccccggaagccggcctggctgagtacctg
ttcgacaagctcaccctgggcggccgcgtcaaagagacttga

>gi568815575r:30971405_31171953|GENSCAN_predicted_peptide_6|338_aa
MGKKQSRKTGNSKNQSTSPPPKERSSSPAMEQSWTENDFDELREEGFRRSNYSELKEEVR
THGKEVKNLEKRLDEWLTRIINAEKSLKDLMELKTTARELRDECTSLSSRFDQREERVSV
MEDQMNETKREEKFREKRIKRNEQSLQEIWDYLKRPNLRLIGVPESDGESGTKLENTLQD
IIQENFPNLARQDNIQIQEIQRMPQRYSSRRATPRYIIVRFTKVEMKEKMLRAAREKGRV
THKGKPIRLTADLLAETLQARREWGPIFNILKEKNFQPRIAYPAKLSFISEGEIQYFADK
QMLRDFVTTRPALKELLKEALNMERNNWYQPLQKHAKW

>gi568815575r:30971405_31171953|GENSCAN_predicted_CDS_6|1017_bp
atggggaaaaaacagagcagaaaaactggaaactccaaaaatcagagcacctctcctcct
ccaaaggaacgcagctcctcaccagcaatggaacaaagctggacggagaatgactttgac
gagttgagagaagaaggcttcagaagatcaaactactccgagctaaaggaggaagttcga
acccatggcaaagaagttaaaaaccttgaaaaaagattagacgaatggctaactagaata
atcaatgcagagaagtccttaaaggacctgatggagctgaaaaccacagcacgagaacta
cgtgacgaatgcacaagcctcagtagccgattcgatcaacgggaagaaagggtatcagtg
atggaagatcaaatgaatgaaacgaagcgagaagagaagtttagagaaaaaagaataaaa
agaaatgaacaaagcctccaagaaatatgggactatctgaaaagaccaaatctacgtctg
attggtgtacctgaaagtgatggggagagtggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggacaacattcaaattcaggaaata
cagagaatgccacaaagatactcctcgagaagagcaactccaagatacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcgggtt
acccacaaagggaagcccatcagactaacagctgatctcttggcagaaactctacaagcc
agaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatt
gcatatccagccaaactaagcttcataagtgaaggagaaatacaatactttgcagacaag
caaatgctgagagattttgtcaccactaggcctgccctaaaagagctcctgaaggaagca
ctaaacatggaaaggaacaactggtaccagccactgcaaaaacatgccaaatggtaa

>gi568815575r:30971405_31171953|GENSCAN_predicted_peptide_7|173_aa
MALLDAAHVAAVPMALLDAAHVAALSEGSHRTRRGKGPTERITLHCPRTVELREQCNMSF
EVSGIAGTPTWAPPQGPHGACSCQQPKQLARFCTCSPMPGLATGSAQSLLLQVHNAASWI
PHSLKCSLPQKVKHGGPSKQATLRPKSDKQVEKIPAPTSPWGRISILDFGLLT

>gi568815575r:30971405_31171953|GENSCAN_predicted_CDS_7|522_bp
atggctttgctggatgcagcccatgtcgctgctgtccccatggctttgctggatgcagcc
catgtggctgctctctcagaaggcagccaccgcacacgacgaggcaaggggcccactgaa
cggataacactccactgtccacggacggtggagctaagagagcagtgtaacatgtccttt
gaggtttcggggattgcaggcacccctacgtgggcaccaccgcagggccctcatggagcc
tgctcctgccagcagccaaagcagctggccagattctgcacttgttcgcccatgcctggt
ctggccacggggtctgcacagagcctgctcctgcaggtgcacaatgcggccagctggatt
ccacactcactcaagtgctctctccctcaaaaggttaagcatggtgggccaagtaaacaa
gccaccctccgtcccaagtccgacaaacaggttgagaaaattcctgcaccaacatcaccc
tggggaagaataagcatcttggactttggacttttaacttag

>gi568815575r:30971405_31171953|GENSCAN_predicted_peptide_8|60_aa
MKLEAFEKTERTDEGKSKYQEPYEAMAKDPLALIHRFLHLYAFICISKVDSDEKVFYDKS

>gi568815575r:30971405_31171953|GENSCAN_predicted_CDS_8|183_bp
atgaaattggaggcatttgagaaaacagaaagaacagatgaggggaagagcaaatatcag
gagccttacgaggcaatggctaaagacccactggccttgattcatagattcctacatctg
tatgcatttatttgtatttcaaaagtagactctgatgagaaagtgttctatgataagtca
taa

>gi568815575r:30971405_31171953|GENSCAN_predicted_peptide_9|309_aa
XDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEY
DRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNK
QLESQLHRLRQLLEQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLN
NSFPSSRDVIIHNEKIIHRLDRIRCFHVSPHYFVLLAFTSTYYVPVEVVGMERRNDKFLA
FKGRVVAAVLNSWSRDRGLAKPEIFTIWPFMGKICQSLLYAIISLSILTHYMYRVTGFCA
DQLSAEQDY

>gi568815575r:30971405_31171953|GENSCAN_predicted_CDS_9|930_bp
nnagatgatgaacatttgttaatccagcattactgccaaagtttgaaccaggactccccc
ctgagccagcctcgtagtcctgcccagatcttgatttccttagagagtgaggaaagaggg
gagctagagagaatcctagcagatcttgaggaagaaaacaggaatctgcaagcagaatat
gaccgtctaaagcagcagcacgaacataaaggcctgtccccactgccgtcccctcctgaa
atgatgcccacctctccccagagtccccgggatgctgagctcattgctgaggccaagcta
ctgcgtcaacacaaaggccgcctggaagccaggatgcaaatcctggaagaccacaataaa
cagctggagtcacagttacacaggctaaggcagctgctggagcaaaggtccgacagcagt
cagcctatgctgctccgagtggttggcagtcaaacttcggactccatgggtgaggaagat
cttctcagtcctccccaggacacaagcacagggttagaggaggtgatggagcaactcaac
aactccttccctagttcaagagatgtcataattcataatgagaagatcatacacaggctt
gacagaatcaggtgctttcacgtgtctcctcattactttgtcctgcttgcttttactagc
acctactacgtaccagtggaggtagtagggatggaaagaagaaatgacaaattccttgcc
ttcaagggcagagtagttgcagcagtgctgaatagctggtccagagaccgtgggcttgca
aagcctgaaatatttactatctggccctttatggggaaaatttgccaatccctgctttac
gctattatttcgttgtccattctgactcattacatgtatagagtcacaggcttctgtgct
gatcaactttcagctgaacaagattattga