GENSCAN 1.0	Date run:  6-Nov-116	Time: 04:04:59

Sequence gi568815575r:21555857_21757788 : 201932 bp : 38.17% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +     83    191  109  1  1   88   54    42 0.370   1.23
 1.02 Intr +   5615   5704   90  0  0   83  107    36 0.860   4.05
 1.03 Term +   9063   9157   95  1  2  108   49    94 0.753   4.51
 1.04 PlyA +  10230  10235    6                               1.05

 2.03 PlyA -  10520  10515    6                               1.05
 2.02 Term -  18122  17944  179  0  2  -10   41   158 0.231  -1.83
 2.01 Init -  18377  18242  136  2  1   53   57   153 0.827   9.05
 2.00 Prom -  21132  21093   40                              -6.15

 3.00 Prom +  22621  22660   40                              -6.75
 3.01 Init +  23058  23212  155  2  2   57   72   187 0.557  13.50
 3.02 Intr +  33813  33856   44  0  2   43   96     9 0.111  -5.83
 3.03 Intr +  35166  35338  173  1  2   57   94   107 0.904   6.94
 3.04 Intr +  39118  39191   74  0  2   65   92    54 0.956   0.79
 3.05 Intr +  39468  39539   72  0  0  125  103    42 0.990   7.00
 3.06 Intr +  45426  45493   68  0  2   78   98    70 0.962   4.63
 3.07 Intr +  50923  51023  101  2  2   63  123    99 0.995   9.81
 3.08 Intr +  53215  53761  547  0  1   47  106   486 0.690  37.83
 3.09 Intr +  84205  84290   86  2  2   55   15    91 0.137  -2.88
 3.10 Intr +  85677  85803  127  2  1   44   72   123 0.633   5.63
 3.11 Intr +  92975  93171  197  0  2   90  116    34 0.621   4.61
 3.12 Term +  96450  96665  216  2  0  123   36   122 0.980   6.66
 3.13 PlyA +  97711  97716    6                               1.05

 4.06 PlyA -  98367  98362    6                               1.05
 4.05 Term - 101954  99998 1957  1  1   66   42  2116 0.381 189.15
 4.04 Intr - 102443 102285  159  1  0   58   64   203 0.807  13.08
 4.03 Intr - 103322 103216  107  2  2   82   94    26 0.911   0.69
 4.02 Intr - 105687 105560  128  1  2   70   78    41 0.626   0.78
 4.01 Init - 111704 111644   61  2  1   76   75    95 0.510   8.46
 4.00 Prom - 113495 113456   40                              -5.45

 5.00 Prom + 116292 116331   40                              -6.45
 5.01 Init + 118522 118802  281  0  2   38   37   129 0.308  -0.67
 5.02 Intr + 120832 120978  147  1  0  137    9    90 0.028   4.43
 5.03 Intr + 129853 129914   62  1  2   98  115    43 0.339   5.46
 5.04 Term + 130956 131299  344  1  2   13   43   194 0.271   1.09
 5.05 PlyA + 131374 131379    6                               1.05

 6.05 PlyA - 131488 131483    6                               1.05
 6.04 Term - 132491 132333  159  2  0   59   38   143 0.211   3.36
 6.03 Intr - 134788 134706   83  2  2   71  110     7 0.272  -0.36
 6.02 Intr - 141388 141188  201  2  0   95   66    62 0.784   3.04
 6.01 Init - 141726 141642   85  0  1   74   64    72 0.650   4.43
 6.00 Prom - 143534 143495   40                              -3.95

 7.09 PlyA - 145509 145504    6                               1.05
 7.08 Term - 149393 149283  111  2  0   99   42    78 0.052   1.88
 7.07 Intr - 155179 155016  164  2  2   73   65    62 0.019   1.17
 7.06 Intr - 156867 156730  138  1  0  113    7    61 0.013   0.01
 7.05 Intr - 177901 177800  102  2  0   95   93    77 0.657   8.13
 7.04 Intr - 178512 178385  128  2  2   65   46    87 0.721   1.60
 7.03 Intr - 181841 181708  134  2  2   88   -1   171 0.469   6.72
 7.02 Intr - 187980 187894   87  0  0  127   78    93 0.990  11.45
 7.01 Init - 198434 198390   45  2  0   43  111    47 0.395   3.23

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 103034 102765  270  1  0   44   21   199 0.873   4.53


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:21555857_21757788|GENSCAN_predicted_peptide_1|97_aa
MGMYVDKKSRDRTSSDLIGKQFCKAQFVRKMKSIGEGKLRPISMPVEYNWVGDYEDPNKM
KRDSRRDIQSQPEISTLSRLKGDHFCYYHYSEELYEH

>gi568815575r:21555857_21757788|GENSCAN_predicted_CDS_1|294_bp
atgggaatgtatgtagataagaaatcaagagacagaactagttctgacttgattggcaaa
cagttctgtaaagctcagtttgtcagaaaaatgaagagtattggtgagggcaagctacga
cctatatctatgccagtggaatataattgggtgggggactatgaagatccaaataagatg
aagagagatagtagaagagacattcagagtcagcctgaaatcagtactcttagtcgtttg
aaaggggaccacttttgttattaccactattcagaagagctgtatgagcactga

>gi568815575r:21555857_21757788|GENSCAN_predicted_peptide_2|104_aa
MWESLELLRHLLNGFDQNADSDMYNEVQAEVVSDEDEKLVGNWSKEQSVQEEADHKNLEK
LQPDNAVEKKNPFSGEKFKPAAEICMSNKEPNVNHQNNGENVSR

>gi568815575r:21555857_21757788|GENSCAN_predicted_CDS_2|315_bp
atgtgggaaagtttggaacttcttagacacttgttgaatggctttgaccaaaatgctgat
agtgatatgtacaatgaagtccaggctgaggtggtctccgatgaagatgagaaacttgtg
gggaactggagcaaagagcaaagtgttcaagaggaagcagaccataaaaatttggaaaag
ttacagcctgacaatgcagtagaaaagaaaaacccattttctggggagaaattcaagcct
gctgcagaaatttgcatgagtaacaaggagccgaatgttaatcaccaaaacaatggggaa
aatgtctccaggtga

>gi568815575r:21555857_21757788|GENSCAN_predicted_peptide_3|619_aa
MSTNQSISSNFNKKLVPFSMEIHRFMVPYSGAEGGDPIGAEGVVDLAADSHQHIKLFRYL
AWSEQTGPIAGKSKRRISCKDLGRGDCEGWLWKKKDAKSYFSQKWKKYWFVLKDASLYWY
INEEDEKAEGFISLPEFKIDRASECRKKYAFKACHPKIKSFYFAAEHLDDMNRWLNRINM
LTAGYAERERIKQEQDYWSESDKEEADTPSTPKQDSPPPPYDTYPRPPSMSCASPYVEAK
HSRLSSTETSQSQSSHEEFRQEVTGSSAVSPIRKTASQRRSWQDLIETPLTSSGLHYLQT
LPLEDSVFSDSAAISPEHRRQSTLPTQKCHLQDHYGPYPLAESERMQVLNGNGGKPRSFT
LPRDSGFNHCCLNAPVSACDPQDDVQPPEVEEEEEEEEEEGEAAGENIGEKRAKLRRCFQ
SLAIEFGNCDSITRALVQFSANTLRELVEPLHAKSDPLLLALNPLDSQIDKLMFREFRSE
RVGESREEKLGDSLQDLYRALEQASLSPLGEHRISTKMEYKLSFIKRCNDPVMNEKLHRL
RILKSTLKAREGEVAIIDKVLDNPDLTSKEFQQWKQMYLDLFLDICQNTTSNDPLSISSE
VDVITSSLAHTHSYIETHV

>gi568815575r:21555857_21757788|GENSCAN_predicted_CDS_3|1860_bp
atgagcacaaaccagagcatttcctccaacttcaacaagaagctggtacccttctccatg
gagattcacagattcatggtcccatactcaggtgctgaaggaggagatccgattggagct
gaaggagttgtagacctggctgctgactcacaccaacatatcaagctcttcaggtactta
gcatggagtgaacagacaggtcctatagcaggcaagagcaaaagacgaatttcttgcaaa
gatcttggccgtggtgactgtgagggctggctttggaaaaagaaagatgcgaagagttac
ttttcacagaaatggaaaaaatattggtttgtcctaaaggatgcatccctttattggtat
attaatgaggaggatgaaaaagcagaaggattcattagcctgcctgaatttaaaattgat
agagccagtgaatgccgcaaaaaatatgcattcaaagcctgtcatcctaaaatcaaaagc
ttttattttgctgctgaacatcttgatgatatgaacaggtggcttaacagaattaatatg
ctgactgcaggatatgcagaaagagagaggattaagcaggaacaagattactggagtgag
agtgacaaggaagaagcagatactccatcaacaccaaaacaagatagccctccaccccca
tatgatacatacccacgacctccctcgatgagttgcgccagtccttatgtggaagcaaaa
catagccgactttcctccacggagacttctcagtctcagtcttctcatgaggagtttcgc
caggaagtaactgggagcagtgcagtgtctcccattcgcaagacagccagtcagcgccgc
tcctggcaggatttaattgagacgccactgacaagttcaggcttacactatcttcagact
ctgcccctggaggattctgtcttctctgactccgcggccatctccccagagcacaggcgg
cagtctaccctgccaactcagaaatgccacctgcaggatcactatgggccatacccctta
gctgagagtgagaggatgcaagtgctaaatggaaatgggggcaagcctcgaagttttact
ctgcctcgagatagcgggttcaaccattgctgtctgaatgctccagttagtgcctgtgac
ccacaggatgacgtgcaacccccagaggtggaggaagaggaggaggaggaggaggaggaa
ggggaggcagcaggggaaaacataggagaaaaaagagctaaactgaggagatgtttccag
tctcttgcaatagaattcggcaattgtgactcgattaccagggctctagttcagtttagt
gctaatacactgcgagagttggtagaacctctccatgccaaatcggatccacttctgttg
gcactcaacccattggactcacagattgataagctaatgtttagagaatttagatcggag
agagtcggtgaaagcagagaagaaaagttaggagactcattgcaagatttatacagggca
ctggagcaggccagtctgtcaccactaggagaacatcgtatttcaaccaagatggaatac
aagctatcatttataaaaagatgtaatgatcctgtaatgaatgaaaaactacaccggctg
agaattctcaaaagcactttaaaggccagagaaggggaagtagccattatcgataaagtc
ctagacaatccagacttgacatctaaagaattccaacaatggaagcagatgtacctcgac
cttttcttggatatctgtcaaaataccacctcaaatgacccactgagtatttcttctgaa
gtagatgtaatcacttcctctctagcacacactcattcatacattgaaacgcatgtctaa

>gi568815575r:21555857_21757788|GENSCAN_predicted_peptide_4|803_aa
MREMEVSAEARIRAGSYREKCWVTKRASREPKSLWSECIRPPEIHMLKLNLQYDSIKKCD
FWEEVYNEWQKIQVNHSFLVHAAKGWVGAGSKNRKGKLRTRPPRPPRRGQSPRPALPGRR
ICAVGHPAPPESTGNSVLPGDGVQPPPPLACRLLPALGRMSYFLSYCKAHGGALLTGYQA
LRAEGFLCDVTLETEGSEFPAHRSLLACSSDYFRALFKSHTQESRARVIHLHVPSAAGLQ
RLLDFIYTAWLSLSMDTVEDTLEAASYLQVTEALGLCGRYLERQLAPENCCFAANVAARF
GLAHTLDAAERCIVSHLQELLARGAGPAGLLELNPTSLRAVLGAPDVARVPEARLLGLAL
AWLRQEPTTERLAHCTELLERVRFGLVPADVLRRVYSGSGLVLPARVKGLIIQALNYHTT
PSRQPLMQGEQTSIRSPQTRILLVGGRRAREVVIEEVAAPQRAARGQVAAPEPEEEEEEL
EEEEEEEEWELTQNVVAFDVYNHRWRSLTQLPTPLLGHSVCTAGNFLFVLGGESPSGSAS
SPLADDSRVVTAQVHRYDPRFHAWTEVPAMREARAHFWCGAVGERLLAVGGLGAGGEVLA
SVEMYDLRRDRWTAAGALPRALHGHAGAVGDRGVVYISGGKAGRGEGGASSLRDLYVLGP
EEQVWSKKAPMGTARFGHHMAVLRGAVFAFLGRYEPFSEIERYDPGADQWTRLRPLPYDR
FCYGLAVVEETALLLGGLKWRDSRQVPTRNVVGYDLDLDRWEDIGCALPWAWSGLRCAVL
QLAEGGDDEREGEVGEALDLVLG

>gi568815575r:21555857_21757788|GENSCAN_predicted_CDS_4|2412_bp
atgagggagatggaggtgtcagcagaagccagaattagagcagggagttatcgggaaaaa
tgttgggtcacaaagcgtgcttctagggaacccaaatcgctatggtctgaatgtatacgt
cctcctgaaattcatatgttgaaacttaatctccaatatgatagtattaagaagtgtgac
ttttgggaggaagtgtacaatgagtggcagaaaatccaagtcaaccacagtttccttgtt
catgctgcaaagggatgggtcggggcagggtccaagaataggaagggaaaactcagaacc
cgtcctcctcgtccaccccggagaggtcagagtcctcgccctgcactcccgggacgccgc
atctgcgccgtcggacatccagcacccccggagtccaccggcaactcggttcttccaggt
gatggtgtgcagccaccgccgcccctggcgtgcaggctgcttccagccctgggtagaatg
agttacttcctgtcttactgcaaagctcatggcggcgcgctgctcaccggctaccaggcc
ctgcgcgccgagggcttcctgtgcgacgtgacactggagaccgagggcagcgaattcccg
gcgcacaggtcgctcctggcgtgctccagtgactacttcagggccctgttcaagagccac
acccaggaatcccgggcgcgcgtgatccacctgcacgtgccatcggcagccggcctgcag
cgcctgctggacttcatctacactgcctggctgtcgctttccatggacactgtagaggac
actctggaggccgccagctacctgcaggtcactgaggccctggggctctgtgggcgctac
ttggagcgccagctggctccagagaactgctgcttcgccgccaacgtggcagcgcgcttt
ggcctggctcacacgctggacgcggccgagcgctgcatcgtgagccacttgcaggagctg
ctggcgcggggcgcgggccccgcgggactcctggagctcaaccctacatcgctgagggct
gtactgggtgcccccgacgtggcgcgggtgcccgaggcccggctactgggcctggcgtta
gcttggttgcggcaggagcccacaactgagcgcctggcacactgtacagagttgctggag
cgtgtccgctttggcctggttcccgccgacgtactgcggcgcgtgtactcgggctctggc
ctcgtgctgcccgcccgggtcaagggcctcatcatccaggccctcaactaccacacgacg
ccctcccgccagccgctcatgcagggcgagcagaccagcatccggagcccccagacccgc
atcttgttggtgggggggcgcagggcacgggaggtggtgattgaggaggtcgcggccccg
cagagggcagctaggggccaggtcgccgccccagagcccgaggaagaagaggaagagttg
gaggaagaggaggaggaggaggagtgggagctcacccagaacgtggtggccttcgatgtg
tacaatcaccgctggcgcagccttacgcagctacccacaccactgctggggcacagcgtg
tgcaccgcgggcaacttcctgtttgtcctgggtggggagagcccttccggcagtgcatcc
tctcccctggccgacgactcgcgggtggtcacggcccaagtgcaccgttacgacccgcgc
ttccacgcttggacggaagtgcccgccatgcgggaagcgcgggcccacttctggtgcggc
gcggtgggcgagaggctcctggccgtcgggggcctgggtgcgggcggtgaggtgctggcc
tcggtggagatgtacgacctgcgtcgggaccgctggacggcggctggggcactaccgcgg
gctctgcacggtcacgcgggggccgtcggggaccgcggtgttgtgtacatctcggggggc
aaggcagggagaggcgagggcggagcgagcagcctccgggacttatacgtcctgggccct
gaggagcaggtttggagcaagaaggcacccatgggcaccgcacgtttcgggcaccacatg
gcagtgctgcgcggcgctgtgtttgcttttctggggcgatacgagcccttctctgagatc
gagcgctacgaccccggcgccgaccagtggactcggttgcggccgctgccctacgaccgc
ttctgctatgggctggccgtggtcgaggagacagcgttgctgctgggcggcctcaagtgg
cgggactcgcgccaggtgcctacccgcaacgtagtgggctacgacctcgacctggaccgt
tgggaggacatcggctgcgcgttgccctgggcctggagcggcctgcggtgcgcagtgctg
cagctggccgagggtggggacgacgagagggagggagaggttggagaggcgctagatttg
gtgctgggctga

>gi568815575r:21555857_21757788|GENSCAN_predicted_peptide_5|277_aa
MCWKKKKEKEEERKEERRKKERRKERKEGRKEGRKEGRKEGRKEGRKKEKERKKKKSKQA
GRQEGKKARGQESKLASGGVIINQLYLYHVSDETKISLISIVHAYVRNSNSLEKYKFKKA
DNHPQNTIQKRLSLTLREIKTIAEARDKLTSPMTKLKSNQKMKDRKKESPFPWRSQGTLC
STSFLWKARYYPGLPAVIRRPKPLSVVPCFNGHAPCPLSCSSRTPGSSLKFLEDNGRRNS
ESLKVFDLSDKYIEENADVCCLPSLLRLPEREGPPVP

>gi568815575r:21555857_21757788|GENSCAN_predicted_CDS_5|834_bp
atgtgctggaaaaaaaagaaagaaaaagaagaagaaagaaaggaagaaagaagaaagaaa
gaaagaaggaaagaaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaa
ggaaggaaggaaggaaggaagaaagaaaaagaaagaaagaaaaagaaaagcaagcaagca
ggaaggcaggaaggcaagaaggcaagaggtcaagaaagcaagctagcttcaggtggggta
atcattaaccagctttatttgtatcacgtctcagatgaaacaaaaattagtcttatcagc
atagtgcatgcttatgtgaggaattcaaatagtttagaaaagtacaaatttaagaaagct
gacaatcacccacaaaataccatccagaagcgactatcactgacattaagagagatcaag
acaattgcggaagccagggacaagttgacaagtccaatgactaagctaaaatccaaccag
aagatgaaagaccgcaaaaaggagtctccctttccttggaggagtcagggaacactctgc
tccaccagcttcttgtggaaggctcgatattatccaggcctgcccgcagtcatccggagg
cctaaacccctctctgtggtgccgtgcttcaatggtcacgctccttgtccactttcatgt
tcctcccgtactcctggttcctctttgaagttcttagaagataacggtagaagaaatagt
gaaagtcttaaagtctttgatctttctgataagtacatagaagaaaacgctgacgtatgc
tgccttccctctctgcttcggctacctgaaagggaagggccccctgtcccatga

>gi568815575r:21555857_21757788|GENSCAN_predicted_peptide_6|175_aa
MIMVPRLKIRRVEATGICGSNGLIMGSPALISETPLRDSFYLSKCALGKGKMYIFGGLLD
TDSEITLIPEDQESYCDPLIRWTEDKWSLDRSPPNDLIFEIKICYCKSASECQKICLSCK
RTQVTINHNQSRTGLTENSVSSGTPLGNLPRADTINPTSLHSSLAISQNSHETVH

>gi568815575r:21555857_21757788|GENSCAN_predicted_CDS_6|528_bp
atgatcatggttcctagactgaaaattagaagagtcgaagccacagggatctgtggcagt
aatggactgatcatgggatccccagccctcatcagtgagactccactgcgagactcattt
taccttagtaaatgtgcactgggaaagggaaaaatgtacatctttgggggattattggac
actgactctgagatcacactaattcctgaggaccaagaaagttactgtgacccattaatc
agatggacagaagataaatggagtttggacaggagtccacctaacgatttaatatttgaa
ataaaaatctgctattgcaaatcagcaagtgaatgccagaaaatctgtttaagttgcaag
cgaacccaggtcaccatcaaccacaaccagtcaaggacaggtctaacagaaaactctgtt
tctagtggaacaccacttggcaaccttccgagagcagacaccattaatccaacaagtcta
cactcaagccttgccatttctcagaacagtcatgaaacagtccactga

>gi568815575r:21555857_21757788|GENSCAN_predicted_peptide_7|302_aa
MNMSKQPVSNVRAIQANINIPMGAFRPGAGQPPRRKECTPEVEEGVPPTSDEEKKPIPGA
KKLPGPAVNLSEIQNIKSELKYVPKAEQYCSRYHLRLHGQRSGEPAEPLWAGVQTDFVSI
SVCSRPLDQSIVVKELSDIKELKRNKISIKVVMTHQLQEKEMISKDVIELCLGREILGQY
FSNEVGGPFRDREDWVLMDEEKFPTKSGAACGMLGLLEFYRDPGVGEAEGQGDLQEDTCN
GSCFICHLMPGSFCKEESGLFCRLNKRSASKSRAIIAYTCDWPQSQQCLMSLSFPEKVPV
WS

>gi568815575r:21555857_21757788|GENSCAN_predicted_CDS_7|909_bp
atgaatatgtcgaaacagccagtttccaatgttagagccatccaggcaaatatcaatatt
ccaatgggagcctttcggccaggagcaggtcaaccccccagaagaaaagaatgtactcct
gaagtggaggagggtgttcctcccacctcggatgaggagaagaagccaattccaggagcg
aagaaacttccaggacctgcagtcaatctatcggaaatccagaatattaaaagtgaacta
aaatatgtccccaaagctgaacagtattgtagcagataccacctcaggcttcatggacaa
aggtctggggaacctgcagaaccgctctgggctggtgttcaaacagactttgtgtccatt
tctgtttgttcccgacccttagatcagagcatagtggtaaaagaactcagtgatatcaaa
gaattgaagaggaacaaaataagtatcaaagtggtaatgacgcatcaattacaagaaaaa
gaaatgattagcaaagatgttattgaactctgccttggtagggaaatcttgggtcaatat
ttctccaatgaagtcggtggcccctttagagacagggaggactgggttctgatggatgaa
gagaaatttcccacaaaatctggagctgcctgtggcatgttgggccttcttgaattctac
cgggacccgggagtgggggaagctgagggacagggtgatctgcaggaggacacctgcaat
ggctcctgcttcatctgccacctcatgcctggctccttctgcaaagaagaatcaggttta
ttttgtaggctgaacaagagatcagcttccaaaagcagggctatcattgcctacacctgt
gactggccacagagtcagcagtgcctgatgagtttaagttttcccgaaaaggtgcctgtc
tggtcatag