GENSCAN 1.0	Date run:  8-Nov-116	Time: 16:01:06

Sequence gi568815575r:2834835_3058436 : 223602 bp : 43.81% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   4215   4254   40                              -1.96
 1.01 Init +   8315   8520  206  1  2   79  110   209 0.801  18.54
 1.02 Intr +  19146  19320  175  0  1   70  105   241 0.960  23.94
 1.03 Intr +  20159  20321  163  1  1   73  127   146 0.999  16.55
 1.04 Intr +  21664  21790  127  2  1   63   92    82 0.983   5.84
 1.05 Intr +  25009  25231  223  1  1   76   98   138 0.918  11.73
 1.06 Intr +  26688  26888  201  2  0   72   95    73 0.839   5.88
 1.07 Term +  46218  46379  162  2  0   92   36   324 0.829  25.54
 1.08 PlyA +  47426  47431    6                               1.05

 2.11 PlyA -  47471  47466    6                               1.05
 2.10 Term -  72798  72437  362  1  2  122   42   282 0.989  21.70
 2.09 Intr -  74008  73887  122  0  2   60   79    76 0.994   4.04
 2.08 Intr -  75145  74983  163  2  1   91   98   121 0.998  12.43
 2.07 Intr -  75959  75825  135  0  0   64  113    80 0.997   8.64
 2.06 Intr -  80858  80722  137  1  2   58   97    21 0.875   0.21
 2.05 Intr -  83393  82970  424  0  1   78  121   454 0.984  40.62
 2.04 Intr -  85889  85767  123  0  0  106   36   133 0.963  10.46
 2.03 Intr -  87190  87069  122  0  2   65   77    28 0.590  -0.46
 2.02 Intr -  90931  90782  150  0  0   98   77    90 0.652   8.18
 2.01 Init -  94441  94398   44  1  2   67   51   112 0.877   3.29
 2.00 Prom -  98173  98134   40                              -7.56

 3.14 PlyA -  99211  99206    6                               1.05
 3.13 Term - 100356  99998  359  1  2   73   36   146 0.840   2.57
 3.12 Intr - 102029 101908  122  1  2   91   79    76 0.960   7.14
 3.11 Intr - 103423 103261  163  2  1   88   92   190 0.992  18.43
 3.10 Intr - 108365 108231  135  0  0   93  116    44 0.992   8.24
 3.09 Intr - 111300 111164  137  2  2   93   97    86 0.931  10.21
 3.08 Intr - 114893 114470  424  0  1   98   82   213 0.908  14.62
 3.07 Intr - 118431 118309  123  1  0   34   76    84 0.165   2.36
 3.06 Intr - 120703 120582  122  0  2   94   82   100 0.246  10.14
 3.05 Intr - 124768 124538  231  0  0   37   76   102 0.274   0.79
 3.04 Intr - 133466 133315  152  2  2   65   93   120 0.740   9.16
 3.03 Intr - 138272 138204   69  2  0  114   65    13 0.296   0.98
 3.02 Intr - 139184 139077  108  2  0   63   61    48 0.356   0.08
 3.01 Init - 144513 144448   66  0  0   58  121    84 0.889   9.77
 3.00 Prom - 145545 145506   40                              -4.56

 4.00 Prom + 163080 163119   40                              -2.86
 4.01 Init + 165364 165386   23  0  2   89   93    11 0.644   0.98
 4.02 Intr + 175196 175317  122  2  2  101   94    42 0.912   6.24
 4.03 Intr + 178213 178338  126  2  0   54   52   184 0.402  12.05
 4.04 Intr + 180136 180559  424  2  1   69   63   226 0.962  11.12
 4.05 Intr + 183700 183836  137  1  2   82  106    18 0.992   3.21
 4.06 Intr + 189187 189321  135  2  0   82   55   254 0.885  22.04
 4.07 Intr + 192479 192641  163  0  1   81   80     7 0.879  -1.77
 4.08 Intr + 194413 194534  122  1  2   84   93   134 0.948  13.64
 4.09 Term + 198184 198551  368  2  2   56   53   145 0.817   2.57
 4.10 PlyA + 198932 198937    6                               1.05

 5.02 PlyA - 200044 200039    6                               1.05
 5.01 Term - 222608 222520   89  0  2  109   47    84 0.904   4.22

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:2834835_3058436|GENSCAN_predicted_peptide_1|418_aa
MAPSPLLSLRSVTLVFLLIFTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLI
TPQVSSLLRVILSKVFDEVIEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCV
FLDADTLVLSNVDELFDRGEFSAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHAMEHGSF
DGADQGLLNSFFRNWSTTDIHKHLPFIYNLSSNTMYTYSPAFKQFGSSAKVVHFLGSMKP
WNYKYNPQSGSVLEQGSASSSQHQAAFLHLWWTVYQNNVLPLYKSVQAGEARASPGHTLC
HSDVGGPCADSASGVGEPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEG
RRSEDVDLAVSVSQISIEEKVKELSPEEERRKWEEGRIDYMGKDAFARIQEKLDRFLQ

>gi568815575r:2834835_3058436|GENSCAN_predicted_CDS_1|1257_bp
atggccccgtcacccctgctgtccctcaggagtgtaactctggtgtttctgttgattttc
acagtgactgatcaggcttttgtcacactagccaccaatgacatctactgccagggcgcc
ctggtcctggggcagtcactgaggagacacaggctgacgaggaagctggtggtgttgatc
actcctcaggtgtccagcctgctcagggtcatcctctcgaaggtgttcgatgaagtcatt
gaagtgaatctaatcgatagtgccgactacatccacctggcctttctgaagagacctgag
ctcgggctcaccctcaccaagcttcactgttggactctcactcactacagcaagtgtgtc
ttcctggatgcagacactctggtgctgtccaatgtcgatgagctgtttgacaggggagag
ttttctgcggccccggaccccggatggccggattgcttcaatagcggggtgtttgtcttc
cagccttctctccacacgcataaactcctgctacagcacgccatggaacacggcagcttt
gacggggcagaccaaggcttactgaatagtttcttcaggaactggtcgaccacagacatc
cacaagcacctgccgttcatctataacttgagtagtaacacgatgtacacttacagccct
gccttcaagcaattcggttccagtgcaaaggtcgtccactttttggggtccatgaaacct
tggaactacaagtacaatccacagagtggctcggtgttggagcaaggctcagcgtccagc
agccagcaccaggcggcattccttcatctctggtggacggtctaccagaacaacgtgctg
cccctttataaaagcgtccaagcgggggaagcacgcgcgtctcctggtcacacactttgc
cacagtgatgtgggggggccgtgtgcggattcagcctctggtgttggagagccgtgtgaa
aattcaacacccagtgcgggcgtgccgtgtgcaaattcaccactgggttctaaccagcct
gctcagggccttccggagccgacccagatagtggatgagaccctgtccctacctgaagga
cgccgttcagaagatgtcgacctggccgtctctgtttcccagatctccatcgaagagaag
gtgaaggaattgagccccgaggaagagaggaggaagtgggaggaaggccgtatcgactac
atggggaaggacgcgtttgctcgcatccaggagaagctggaccggttcctgcagtaa

>gi568815575r:2834835_3058436|GENSCAN_predicted_peptide_2|593_aa
MRSAARRGRAAPAARDSLPVLLFLCLLLKTCEPKTANAFKPNILLIMADDLGTGDLGCYG
NNTLRTPNIDQLAEEGVRLTQHLAAAPLCTPSRAAFLTGRHSFRSGMDASNGYRALQWNA
GSGGLPENETTFARILQQHGYATGLIGKWHQGVNCASRGDHCHHPLNHGFDYFYGMPFTL
TNDCDPGRPPEVDAALRAQLWGYTQFLALGILTLAAGQTCGFFSVSARAVTGMAGVGCLF
FISWYSSFGFVRRWNCILMRNHDVTEQPMVLEKTASLMLKEAVSYIERHKHGPFLLFLSL
LHVHIPLVTTSAFLGKSQHGLYGDNVEEMDWLIGKVLNAIEDNGLKNSTFTYFTSDHGGH
LEARDGHSQLGGWNGIYKGGKGMGGWEGGIRVPGIFHWPGVLPAGRVIGEPTSLMDVFPT
VVQLVGGEVPQDRVIDGHSLVPLLQGAEARSAHEFLFHYCGQHLHAARWHQKDSGSVWKV
HYTTPQFHPEGAGACYGRGVCPCSGEGVTHHRPPLLFDLSRDPSEARPLTPDSEPLYHAV
IARVGAAVSEHRQTLSPVPQQFSMSNILWKPWLQPCCGHFPFCSCHEDGDGTP

>gi568815575r:2834835_3058436|GENSCAN_predicted_CDS_2|1782_bp
atgcgatccgccgcgcggaggggacgcgccgcgcccgccgccagggactctttgccggtg
ctactgtttttatgcttgcttctgaagacgtgtgaacctaaaactgcaaatgcctttaaa
ccaaatatcctactgatcatggcggatgatctaggcactggggatctcggttgctacggg
aacaatacactgagaacgccgaatattgaccagcttgcagaggaaggtgtgaggctcact
cagcacctggcggccgccccgctctgcaccccaagccgagctgcattcctcacagggaga
cattccttcagatcaggcatggacgccagcaatggataccgggcccttcagtggaacgca
ggctcaggtggactccctgagaacgaaaccacttttgcaagaatcttgcagcagcatggc
tatgcaaccggcctcataggaaaatggcaccagggtgtgaattgtgcatcccgcggggat
cactgccaccaccccctgaaccacggatttgactatttctacggcatgcccttcacgctc
acaaacgactgtgacccaggcaggccccccgaagtggacgccgccctgagggcgcagctc
tggggttacacccagttcctggcgctggggattctcaccctggctgccggccagacctgc
ggtttcttctctgtctccgcgagagcagtcaccggcatggccggcgtgggctgcctgttt
ttcatctcttggtactcctccttcgggtttgtgcgacgctggaactgtatcctgatgaga
aaccatgacgtcacggagcaacccatggttctggagaaaacagcgagtcttatgctaaag
gaagctgtttcctatattgaaagacacaagcatgggccatttctcctcttcctttctttg
ctgcatgtgcacattccccttgtgaccacgagtgcattcctggggaaaagtcagcatggc
ttatatggtgataatgtggaggagatggactggctcataggtaaggttcttaatgccatc
gaagacaatggtttaaagaactcaacattcacgtatttcacctctgaccatggaggacat
ttagaggcaagagatggacacagccagttagggggatggaacggaatttacaaaggtggg
aagggcatgggaggatgggaaggtgggatccgcgtgcccgggatcttccactggccgggg
gtgctcccggccggccgagtgattggagagcccacgagcctgatggacgtgttccctact
gtggtccagctggtgggtggcgaggtgccccaggacagggtgattgatggccacagcctg
gtacccttgctgcagggagctgaggcacgctcggcacatgagttcctgtttcattactgt
gggcagcatcttcacgcagcacgctggcaccagaaggacagtggaagcgtctggaaggtt
cattacacgaccccgcagttccaccccgagggagcgggggcctgctacggccgaggcgtc
tgcccatgctccggggagggcgtgacccatcacagaccccctttgctctttgacctctcc
agggacccctccgaggcacggcccctgacccccgactccgagcccctgtaccacgccgtg
atagcaagggtaggtgccgcggtgtcggagcatcggcagaccctgagtcctgtgccccag
cagttttccatgagcaacatcctgtggaagccgtggctgcagccgtgctgcggacatttc
ccgttctgttcatgccacgaggatggggatggcaccccctga

>gi568815575r:2834835_3058436|GENSCAN_predicted_peptide_3|736_aa
MEQKGEFKNDTLIYEFFHIVAKPHPLPIKSSTYTTFQSARVTRFFLDAEKECRCQEGQVE
AALIAMGGTCQGTQRLSTAGESESATHMREPAVQCRRDSQCVSVLAGRRRFFQGAASPLH
PASVALTQLHVRWASTATIGQVSGFPGKIRVSPTTNLGDSDYIFTASHWGLGHYGPAVHV
HSQGGIDERGSNDSGRLYVTNPCGNVPSWTPNIDRLAEDGVKLTQHISAASLCTPSRAAF
LTGRYPVRSGMVSSIGYRVLQWTGASGGLPTNETTFAKILKEKGYATGLIGKWHLGLNCE
SASDHCHHPLHHGFDHFYGMPFSLMGDCARWELSEKRVNLEQKLNFLFQVLALVALTLVA
GKLTHLIPVSWMPVIWSALSAVLLLASSYFVGALIVHADCFLMRNHTITEQPMCFQRTTP
LILQEVASFLKRNKHGPFLLFVSFLHVHIPLITMENFLGKSLHGLYGDNVEEMDWMVGRI
LDTLDVEGLSNSTLIYFTSDHGGSLENQLGNTQYGGWNGIYKGGKGMGGWEGGIRVPGIF
RWPGVLPAGRVIGEPTSLMDVFPTVVRLAGGEVPQDRVIDGQDLLPLLLGTAQHSDHEFL
MHYCERFLHAARWHQRDRGTMWKVHFVTPVFQPEGAGACYGRKVCPCFGEKVVHHDPPLL
FDLSRDPSETHILTPASEPVFYQVMERVQQAVWEHQRTLSPVPLQLDRLGNIWRPWLQPC
CGPFPLCWCLREDDPQ

>gi568815575r:2834835_3058436|GENSCAN_predicted_CDS_3|2211_bp
atggagcagaaaggagaattcaagaatgacacgctcatttatgaatttttccacattgtc
gccaagccacatccattgccaataaaatcttccacatacactacctttcaatctgctcgt
gtgaccagatttttcctggatgctgaaaaagaatgcaggtgtcaagaagggcaggtggaa
gctgcattgatagccatgggtggcacctgccaaggaactcaaaggttgtcaacagcaggg
gagagtgaatcagctacgcacatgcgtgagccagccgttcagtgccgccgagacagccag
tgcgtgtctgttttggcaggaagaagacgtttcttccaaggagcagcctccccgctacat
ccagccagtgtcgcccttacacagctgcatgtcaggtgggcatcaaccgctaccatcggc
caggtgtctggttttccagggaaaatcagggtttcccctactacaaaccttggagactca
gattacatctttactgcatcccactggggattgggacactatggccctgctgtccatgtg
cattcccagggtggcatcgatgaaagaggcagcaatgatagtggcaggctgtatgtcacc
aacccctgcggaaatgttccctcatggactccgaatattgaccgccttgcagaggacggc
gtgaagctgacccaacacatctctgccgcatctttgtgcaccccaagcagagccgccttc
ctcacgggcagataccctgtgcgatcagggatggtttccagcattggttaccgtgttctt
cagtggaccggagcatctggaggtcttccaacaaatgagacaacttttgcaaaaatactg
aaagagaaaggctatgccactggactcattggaaaatggcatctgggtctcaactgtgag
tcagccagtgatcattgccaccaccctctccatcatggctttgaccatttctacggaatg
cctttctccttgatgggtgattgcgcccgctgggaactctcagagaagcgtgtcaacctg
gaacaaaaactcaacttcctcttccaagtcctggccttggttgccctcacactggtagca
gggaagctcacacacctgatacccgtctcgtggatgccggtcatctggtcagccctttcg
gccgtcctcctcctcgcaagctcctattttgtgggtgctctgattgtccatgccgattgc
tttctgatgagaaaccacaccatcacggagcagcccatgtgcttccaaagaacgacaccc
cttattctgcaggaggttgcgtcctttctcaaaaggaataagcatgggcctttcctcctc
tttgtttcctttctacacgttcacatccctcttatcactatggagaacttcctcgggaag
agtctccacgggctgtatggggacaacgtagaggagatggactggatggtaggacggatc
cttgacactttggacgtggagggtttgagcaacagcaccctcatttattttacgtcggat
cacggcggttccctagagaatcaacttggaaacacccagtatggtggctggaatggaatt
tataaaggtgggaagggcatgggaggatgggaaggtgggatccgcgtgcccgggatcttc
cgctggcccggggtgctcccggccggccgagtgattggcgagcccacgagtctgatggac
gtgttccccaccgtggtccggctggcgggcggcgaggtgccccaggacagagtgattgac
ggccaagaccttctgcccttgctcctggggacagcccaacactcagaccacgagttcctg
atgcattattgtgagaggtttctgcacgcagccaggtggcatcaacgggacagaggaaca
atgtggaaagtccactttgtgacgcctgtgttccagccagagggagccggtgcctgctat
ggaagaaaggtctgcccgtgctttggggaaaaagtagtccaccacgatccacctttgctc
tttgacctctcaagagacccttctgagacccacatcctcacaccagcctcagagcccgtg
ttctatcaggtgatggaacgagtccagcaggcggtgtgggaacaccagcggacactcagc
ccagttcctctgcagctggacaggctgggcaacatctggagaccgtggctgcagccctgc
tgtggcccgttccccctctgctggtgccttagggaagatgacccacaataa

>gi568815575r:2834835_3058436|GENSCAN_predicted_peptide_4|539_aa
MKQLLYDCTPNIDRLASEGVRLTQHLAAASMCTPSRAAFLTGRYPIRSGMVSAYNLNRAF
TWLGGSGGLPTNETTFAKLLQHRGYRTGLIGKWHLGLSCASRNDHCYHPLNHGFHYFYGV
PFGLLSDCQASKTPELHRWLRIKLWISTVALALVPFLLLIPKFARWFSVPWKVIFVFALL
AFLFFTSWYSSYGFTRRWNCILMRNHEIIQQPMKEEKVASLMLKEALAFIERYKREPFLL
FFSFLHVHTPLISKKKFVGRSKYGRYGDNVEEMDWMVGKILDALDQERLANHTLVYFTSD
NGGHLEPLDGAVQLGGWNGIYKGGKGMGGWEGGIRVPGIFRWPSVLEAGRVINEPTSLMD
IYPTLSYIGGGILSQDRVIDGQNLMPLLEGRASHSDHEFLFHYCGVYLHTVRWHQKDCAT
VWKAHYVTPKFYPEGTGACYGSGICSCSGDVTYHDPPLLFDISRDPSEALPLNPDNEPLF
DSVIKKMEAAIREHRRTLTPVPQQFSVFNTIWKPWLQPCCGTFPFCGCDKEDDILPMAP

>gi568815575r:2834835_3058436|GENSCAN_predicted_CDS_4|1620_bp
atgaagcaattgctgtatgactgcacacctaatattgaccgcctggcaagtgaaggagtg
aggcttacccagcatctcgcagctgcttccatgtgcaccccaagtcgggctgccttcctg
accggccggtaccccatcagatcagggatggtgtctgcctacaacctgaaccgtgccttc
acgtggcttggtgggtcaggtggtcttcccaccaatgaaacgacttttgccaagctgctg
cagcaccgtggctaccgcacgggactcataggcaaatggcacctgggtttgagctgcgcc
tctcggaatgatcactgttaccacccgctcaaccatggttttcactacttttacggggtg
ccttttggacttttaagcgactgccaggcatccaagacaccagaactgcaccgctggctc
aggatcaaactgtggatctccacggtagcccttgccctggttccttttctgcttctcatt
cccaagttcgcccgctggttctcagtgccatggaaggtcatctttgtctttgctctcctc
gcctttctgtttttcacttcctggtactctagttatggatttactcgacgttggaattgc
atccttatgaggaaccatgaaattatccagcagccaatgaaagaggagaaagtagcttcc
ctcatgctgaaggaggcacttgctttcattgaaaggtacaaaagggaaccttttctcctc
tttttttccttcctgcacgtacatactccactcatctccaaaaagaagtttgttgggcgc
agtaaatatggcaggtatggggacaatgtagaagaaatggattggatggtgggtaaaatc
ctggatgccctggaccaggagcgcctggccaaccacaccttggtgtacttcacctctgac
aacgggggccacctggagcccctggacggggctgttcagctgggtggctggaacgggatc
tacaaaggtggcaaaggaatgggaggatgggaaggaggtatccgtgtgccagggatattc
cggtggccgtcagtcttggaggctgggagagtgatcaatgagcccaccagcttaatggac
atctatccgacgctgtcttatataggcggagggatcttgtcccaggacagagtgattgac
ggccagaacctaatgcccctgctggaaggaagggcgtcccactccgaccacgagttcctc
ttccactactgtggggtctatctgcacacggtcaggtggcatcagaaggactgtgcaact
gtgtggaaagctcattatgtgactcctaaattctaccctgaaggaacaggtgcctgctat
gggagtggaatatgttcatgttcgggggatgtaacctaccacgacccaccactcctcttt
gacatctcaagagacccttcagaagcccttccactgaaccctgacaatgagccattattt
gactccgtgatcaaaaagatggaggcagccataagagagcatcgtaggacactaacacct
gtcccacagcagttctctgtgttcaacacaatttggaaaccatggctgcagccttgctgt
gggaccttccccttctgtgggtgtgacaaggaagatgacatccttcccatggctccctga

>gi568815575r:2834835_3058436|GENSCAN_predicted_peptide_5|29_aa
XLWDEEGSINHLTERESEPPTLPGAEESF

>gi568815575r:2834835_3058436|GENSCAN_predicted_CDS_5|90_bp
naattatgggatgaagagggctccataaaccatctcaccgaaagagaatcagaaccacct
actcttccaggagctgaagagagcttttaa