GENSCAN 1.0	Date run: 27-Jul-117	Time: 10:33:56

Sequence gi568815576f:25465041_25822447 : 357407 bp : 43.67% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6713   6823  111  1  0   69   80    34 0.232   1.28
 1.02 Term +   9329   9391   63  1  0   84   38   100 0.590   2.49
 1.03 PlyA +  13697  13702    6                               1.05

 2.00 Prom +  28341  28380   40                              -0.66
 2.01 Init +  45763  45868  106  0  1  109   87     6 0.233   2.98
 2.02 Intr +  54350  54375   26  0  2   51   89    53 0.699  -0.56
 2.03 Intr +  54883  55122  240  0  0   77   87   224 0.884  18.95
 2.04 Intr +  55642  55693   52  0  1  123  110    19 0.857   6.08
 2.05 Term +  81511  81530   20  2  2  150   43    -2 0.017  -0.02
 2.06 PlyA +  84510  84515    6                               1.05

 3.00 Prom +  90983  91022   40                              -4.96
 3.01 Init + 100001 100113  113  1  2  125   81   201 0.049  22.78
 3.02 Intr + 139337 139413   77  2  2   92  111    66 0.130   8.46
 3.03 Intr + 162781 163014  234  2  0   14   41   160 0.003   1.56
 3.04 Intr + 179552 179625   74  0  2  121   94     1 0.044   3.13
 3.05 Intr + 196536 196637  102  2  0   10  103   118 0.340   5.87
 3.06 Intr + 220130 220208   79  1  1  104  115    54 0.920   8.82
 3.07 Intr + 222497 222627  131  0  2   47  100    60 0.968   3.51
 3.08 Intr + 228341 228534  194  1  2   90   24   138 0.685   5.89
 3.09 Intr + 230067 230174  108  0  0  128   96   122 0.938  16.40
 3.10 Intr + 238470 238536   67  0  1   47   79    67 0.475   0.61
 3.11 Intr + 239069 239169  101  1  2   95   65    58 0.580   3.11
 3.12 Intr + 244858 244924   67  1  1  106   73    54 0.429   4.61
 3.13 Intr + 246028 246123   96  0  0   42   81   105 0.363   5.41
 3.14 Intr + 249368 249530  163  1  1   24   93   205 0.991  14.15
 3.15 Intr + 253205 253341  137  0  2  103  114   -15 0.983   2.89
 3.16 Intr + 257249 257354  106  1  1  109   84    83 0.777   9.79
 3.17 Intr + 263182 263348  167  2  2   67   47    94 0.490   2.88
 3.18 Intr + 265206 265291   86  2  2   66  107    28 0.285   1.12
 3.19 Intr + 278014 278137  124  1  1   77   17    99 0.088   2.29
 3.20 Intr + 285552 285691  140  2  2  108   61    81 0.777   6.66
 3.21 Intr + 289814 289952  139  2  1   62   39    82 0.027   1.17
 3.22 Intr + 298191 298349  159  2  0   77  107    67 0.047   7.68
 3.23 Intr + 303075 304388 1314  2  0   67   94   618 0.812  48.06
 3.24 Intr + 305070 305136   67  2  1   64  111    34 0.968   1.78
 3.25 Intr + 305832 305944  113  1  2   53  100    97 0.996   7.50
 3.26 Intr + 307294 307470  177  0  0   27  100   235 0.993  18.72
 3.27 Intr + 312543 312741  199  2  1   93   80   166 0.946  15.22
 3.28 Intr + 314929 315158  230  2  2  -20   94   378 0.649  25.19
 3.29 Intr + 316694 316794  101  1  2  127   99    80 0.999  11.91
 3.30 Intr + 320388 320451   64  0  1  147  116    87 0.900  16.12
 3.31 Intr + 332913 333057  145  2  1  120  102   182 0.963  22.66
 3.32 Intr + 344696 344775   80  0  2   31   83    42 0.003  -2.73
 3.33 Term + 354993 355091   99  2  0  -20   39   230 0.037   5.43
 3.34 PlyA + 356835 356840    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 289814 289979  166  2  1   62   45   123 0.817   2.79


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576f:25465041_25822447|GENSCAN_predicted_peptide_1|57_aa
FREEKAGGIWGAFTTCNLLALGTQEEEEAGQKEQMEQSRFDGHLRCFQWLLLYTLLP

>gi568815576f:25465041_25822447|GENSCAN_predicted_CDS_1|174_bp
ttcagggaggagaaagcggggggaatttggggtgcatttactacctgcaatcttttggct
ttgggaactcaggaggaggaggaggcaggacagaaagagcagatggaacagtcccgtttt
gatggacacttgcgttgcttccagtggctgctgctgtacaccttgctgccgtga

>gi568815576f:25465041_25822447|GENSCAN_predicted_peptide_2|147_aa
MAQDSIIQHLLTFNWPKSVKVSGAEKNILPEKEGKRAYVFWEKQAQSTGSCLGPRGSEGS
KEEQTMGSTQTSATHWSLSPMLHDPSTTRRREKVYDPPYTRNSPMISMETQRYTLQHPAK
MWYLVLECGYESWNSGAMLLPDVLGLV

>gi568815576f:25465041_25822447|GENSCAN_predicted_CDS_2|444_bp
atggctcaagattctatcatacaacatctgctcacattcaactggccaaagtcagtcaag
gtcagtggggcagaaaagaatatactgcccgaaaaggaaggaaaaagagcctacgtcttc
tgggaaaagcaggcccagtccacaggctcatgtctggggccccgggggagtgagggcagc
aaagaagaacagacaatgggctccacgcagacctctgcaacacactggagcctgagccca
atgctgcacgacccatcaactacaagaaggagggagaaggtgtatgaccccccctacacc
cgcaactctcccatgatctccatggagacccaaagatatacactgcagcacccagcaaag
atgtggtacttggtgttggagtgtggatatgagtcatggaactctggggctatgttgctg
ccagatgtcctgggtctggtctga

>gi568815576f:25465041_25822447|GENSCAN_predicted_peptide_3|1750_aa
MADLEAVLADVSYLMAMEKSKATPAARASKRIVLPEPSIRSVMQKYLAERNEITFDKIFN
QKIEEDARGISVNARNDKEPGTDTQITHMDLTKYLRGGHTEDSLSNSIDLQIPIQKSPRT
FYAKAPSSRVKLGKGPIERQTGFLLFKDFCLNEINEAVPQVKFYEEIKEYEKLDNEEDRL
CRSRQIYDAYIMKELLSCSHDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVF
SEKEMRFYATEIILGLEHMHNRFVVYRDLKISIVDIFPFQNCDLILISTGYKVTEKDFPG
NPEIKPSRKMAWMSLIEISNALTAWPDDLTLSNFSGTHGYMAPEVLQKGTAYDSSADWFS
LGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDTFSPELKSLLEGLLQRDVSKR
LGCHGGGSQEVKEHSFFKGVDWQHVYLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGI
KLLDCDQELYKNFPLVISERWQQEVTETVYEAVNADTDKIEARKRAKNKQLGHEEDYALG
KDCIMHGYMLKLGNPFLTQWQRRYFYLFPNRLEWRGEGESRSDPEFVQWKKELNETFKEA
QRLLRRAPKFLNKPRSVDLLVCAERRMHVFRHVGQHTCCEILLSSTSSEGFLLVDKYRKG
FILDWLSHKRISFFHSYVTRIKLEDPERSSKPKTSSVSDLSFSMEEARSGEARNGEPSRL
PVGSKLSSLASTRKCGDLGFYPEPCGTAEELHAYTHQPDYGQDRILNEDPINKEPNSDLS
LVASGGEGRPSGKAGSLRAKDSPYDSQDSPWSPKLRVILGKRLLTWPGLGWRGRRIREED
KSPPPSSPPPLFSVIPGGFIKQLVRGTEKEAKEARQRKQLAVASPEREIPEISISQPNSK
SSSGTRSGSQQISQDDQSSSPGSSDILGKESEGSRSPDPEQMTSINGEKAQELGSSATPT
KKTVPFKRGVRRGDVLLMVAKLDPDSAKPEKTHPHDAPPCKTSPPATDTGKEKKGETSRT
PCGSQASTEILAPKAEKTRTGGLGDPGQGTVALKKGEEGQSIVGKGLGTPKTTELKEAEP
QGKDRQGTRPQAQGPGEGVRPGKAEKEGAEPTNTVEKGNVSKDVGSEGKHVRPQIPGRKW
GGFLGRRSKWDGPQNKKDKEGVLLSKAEKTGEPQTQMEKTSQVQGELGDDLRMGEKAGEL
RSTTGKAGESWDKKEKMGQPQGKSGNAGEARSQTEKGCEAPKEVSTMVESPAAPGKGGWP
GSRGQEAEEPCSRAGDGAGALETELEGPSQPALEKDAERPRIRKENQDGPAPQEEGKGGQ
SRDSDQAPEDRWYEAEKVWLAQKDGFTLATVLKPDEGTADLPAGRVRLWIDADKTITEVD
EEHVHRANPPELDQVEDLASLISVNESSVLNTLLQRYKAQLLHTCTGPDLIVLQPRGPSV
PSAGKVPKGRRDGLPAHIGSMAQRAYWALLNQRRDQSIVALGWSGAGKTTCCEQVLEHLV
GMAGSVDGRVSGAVEKVDLCEVAVAAPGPSVTCGPMLPPTVEKIRATFTVLRAFGSVSMA
HSRSATRFSMVMSLDFNATGRITAAQLQTMLLEKSRVARQPEGESNFLVFSQMLAGLDLD
LRTELNLHQMADSSSFGMGVWSKPEDKQKAAAAFAQLQGAMEMLGISESEQRAVWRVLAA
IYHLGAAGACKELGYPDTSSKDGPSRGRKKWLDALQAVVSELDHTIITIIITIIITVITI
IITIIISIIF

>gi568815576f:25465041_25822447|GENSCAN_predicted_CDS_3|5253_bp
atggcggacctggaggctgtgctggccgatgtcagttacctgatggccatggagaagagc
aaggcgaccccggccgcccgcgccagcaagaggatcgtcctgccggagcccagtatccgg
agtgtgatgcagaagtaccttgcagagagaaatgaaataacctttgacaagattttcaat
cagaaaattgaggaggatgctagaggcatttctgtcaacgccaggaatgacaaggagcca
ggaacagacacacagatcactcacatggatctgaccaagtacctgagaggtggacataca
gaggattccttaagcaatagtattgacttgcaaatcccaatacagaaaagccctagaacc
ttctatgcaaaagccccatcatccagggtaaaactgggcaaaggtcctattgagagacag
acaggtttcttgctatttaaagatttttgtttgaatgaaattaatgaagctgtacctcag
gtgaagttttatgaagagataaaggaatatgaaaaacttgataatgaggaagaccgcctt
tgcagaagtcgacaaatttatgatgcctacatcatgaaggaacttctttcctgttcacat
gactgtcctttcattgtatgtatgacctatgccttccataccccagataaactctgcttc
atcctggatctgatgaacgggggcgatttgcactaccacctttcacaacacggtgtgttc
tctgagaaggagatgcggttttatgccactgaaatcattctgggtctggaacacatgcac
aatcggtttgttgtctacagagatttgaagatatctattgtagatatctttccattccag
aactgtgacttgatcctgataagtacaggttacaaagtcacggaaaaggactttccaggc
aaccctgaaattaaaccttcccggaaaatggcttggatgtccctcatagaaatctccaac
gctctcacagcgtggcctgatgaccttaccctgtcaaactttagtggcacccatgggtac
atggctcccgaggtgctgcagaaggggacggcctatgacagcagtgccgactggttctcc
ctgggctgcatgcttttcaaacttctgagaggtcacagccctttcagacaacataaaacc
aaagacaagcatgaaattgaccgaatgacactcaccgtgaatgtggaacttccagacacc
ttctctcctgaactgaagtcccttttggagggcttgcttcagcgagacgttagcaagcgg
ctgggctgtcacggaggcggctcacaggaagtaaaagagcacagctttttcaaaggtgtt
gactggcagcatgtctacttacaaaagtacccaccacccttgattcctccccggggagaa
gtcaatgctgctgatgcctttgatattggctcatttgatgaagaggataccaaagggatt
aagctacttgattgcgaccaagaactctacaagaacttccctttggtcatctctgaacgc
tggcagcaagaagtaacggaaacagtttatgaagcagtaaatgcagacacagataaaatc
gaggccaggaagagagctaaaaataagcaacttggccacgaagaagattacgctctgggg
aaggactgtattatgcacgggtacatgctgaaactgggaaacccatttctgactcagtgg
cagcgtcgctatttttacctctttccaaatagacttgaatggagaggagagggagagtcc
cggagtgatccagagtttgtgcagtggaagaaagagttgaacgaaaccttcaaggaggcc
cagcggctattgcgtcgtgccccgaagttcctcaacaaacctcggtcagttgatcttctg
gtctgtgctgagaggcgcatgcatgtctttcgtcacgtcgggcagcacacctgctgtgaa
atactgctttcatctacctcttcagaaggcttcttgcttgttgacaagtaccgcaaaggc
tttattctggactggctatctcataaaaggatttctttttttcactcctatgttacaagg
atcaaattagaggatcctgaaaggtcatccaagccaaaaacatcctccgtctctgacttg
agcttttccatggaggaggccaggagtggggaggcccggaatggggagcccagtcggctc
ccagtcggctccaagctgtccagtctggcctcaacccgcaagtgtggggatctgggcttc
tatcctgaaccttgtggaacagctgaggaattacatgcttacactcaccaaccagactat
gggcaagacagaattctaaatgaagatccaattaataaagaaccaaatagtgacctaagc
cttgtggccagtggaggggagggcaggccctctgggaaggctggcagcctcagggctaag
gacagcccctacgacagccaggattccccctggagcccgaagctgagggtgattcttggg
aagcggctgctgacgtggccaggcctgggctggagaggaaggcggattcgggaagaggac
aagagccctccaccatcctcgccccctcctcttttctctgtcatcccagggggcttcatt
aagcaactggtccgggggactgaaaaagaggccaaggaagcgagacagaggaagcagtta
gctgtcgcctctccagaacgagagatcccagaaatttccatcagccaacccaacagcaag
tccagcagtggcaccagatctggaagccagcagatctctcaggacgaccagtcaagctct
cctgggagctcagacattctgggcaaggagagcgaggggtcccgcagccccgaccctgag
cagatgacaagcatcaatggtgagaaggcccaggagctgggctccagtgcgacaccaacc
aaaaagactgtccccttcaagaggggcgtgaggaggggtgatgtgttgttgatggtggcc
aagctggacccggactcagccaagccagagaagactcatccccatgacgcccccccttgc
aagacctctccccccgccacagatactggaaaggaaaagaaaggggagacctctaggact
ccttgtggctcccaggccagcaccgagatcttggccccgaaagctgagaagacccggact
gggggtcttggggacccaggccaaggaactgtggcactgaaaaaaggcgaggagggtcaa
agcatagtggggaaggggcttgggacccccaagaccacagagctgaaagaggctgagccc
cagggcaaagacaggcaggggaccaggccccaagcccaagggcccggcgagggggtgcga
ccagggaaagcagagaaggagggagcagagcccacaaacacggtggaaaaggggaatgtc
tctaaggacgtagggagtgaagggaagcacgtaaggccccaaatccctgggagaaagtgg
ggaggtttcctgggaagaaggagtaagtgggacggtccccagaataagaaggacaaagaa
ggggtgctcttaagtaaggcagagaagacaggtgagcctcagacccagatggagaagaca
agccaagtgcagggcgagttgggggacgatctgagaatgggggagaaagcaggtgagctt
cggagcacgactgggaaggcaggtgagtcctgggataagaaggaaaagatggggcaaccc
cagggtaagtccgggaacgcaggtgaagctcggagtcagacagagaagggctgtgaagcc
ccaaaggaggtgagcacaatggtggagtcgccagcagctcctgggaagggaggctggcca
ggaagccgtgggcaggaagcagaggagccctgctcaagagcaggtgatggggctggtgcc
ctggagacagagctggaaggacccagccagcctgctctggagaaggatgcagaaaggcct
cggatacggaaggagaaccaagacgggccagccccgcaggaggagggcaaaggaggccag
agcagagactcagaccaggctcctgaggacagatggtatgaggcagagaaagtctggctg
gctcagaaggatggatttactcttgctacggtgctaaagccagatgagggaacagcagac
ctgccagcaggaagggtgagactttggattgatgctgacaaaaccatcactgaggtggat
gaggagcatgtccatcgggccaaccctcctgagctggaccaggtcgaggacctggcctct
ctcatcagtgtcaacgaatccagtgtcctgaacacgcttctgcagcgctacaaagctcag
ctgctgcacacctgcacagggcctgatctgattgtcctccagccccgggggccctcggtg
ccttctgcagggaaggtgcccaagggccgccgggatggcctgcctgcccacattggctcc
atggcacagcgggcatactgggcgctgctgaaccagcggagagaccagagcattgtggcc
ctgggctggagtggcgctgggaagaccacctgctgtgagcaggtcctggaacacctggtg
gggatggcaggcagtgtggatggcagggtctcaggggccgtggaaaaggtggacctgtgt
gaggtggcagtggcagcacctgggccatcagtgacatgtggccccatgctgcccccaaca
gtggagaagatccgagccaccttcactgtcctccgggccttcggctctgtgtccatggcc
cacagccgcagtgccacccggttctccatggtgatgtcgctggacttcaacgctacaggc
cgcatcacagctgctcagctccagacaatgcttttggagaagagccgcgtggcacggcag
ccggaaggggaaagtaacttcctggttttctcccagatgctggctggattggacttggat
ctcaggacggagctgaacctgcaccagatggcagatagcagctcctttggcatgggcgtg
tggtccaagcctgaagataaacagaaggcggcagctgcctttgcccagctccagggtgcc
atggagatgctcggcatctcagagagcgagcagcgggctgtttggcgggtcctggcagcc
atctaccacctgggtgcggcgggggcctgcaaagaactgggataccccgacaccagtagc
aaggacggtccatccaggggtaggaagaagtggctggatgctcttcaagctgtggtaagt
gaattagatcacaccatcatcaccatcatcatcactatcatcatcactgtcatcaccatc
atcatcaccatcatcatctccatcattttttaa