GENSCAN 1.0	Date run:  8-Nov-116	Time: 10:07:06

Sequence gi568815577r:25624643_25829794 : 205152 bp : 39.58% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  15180  15246   67  2  1  101   87   209 0.971  21.39
 1.02 Intr +  59241  59306   66  1  0  100   87    49 0.090   3.96
 1.03 Intr +  65224  65331  108  2  0   49  121    17 0.341   0.44
 1.04 Intr +  69114  69281  168  1  0   81   20   172 0.449   8.70
 1.05 Intr +  74035  74237  203  2  2   37   95   151 0.635   8.78
 1.06 Intr +  77528  77627  100  1  1    8   87   102 0.400   0.86
 1.07 Intr +  81337  81444  108  2  0   43  108    48 0.302   1.64
 1.08 Intr +  90535  90670  136  2  1   59   70    74 0.024   1.41
 1.09 Term +  94397  94502  106  2  1   83   33    67 0.019  -2.40
 1.10 PlyA +  95210  95215    6                               1.05

 2.05 PlyA -  95717  95712    6                               1.05
 2.04 Term - 100035  99998   38  1  2  118   49    62 0.982   1.82
 2.03 Intr - 100708 100584  125  0  2  101  102   145 0.999  16.51
 2.02 Intr - 105159 104989  171  2  0  100   98   202 0.836  20.54
 2.01 Init - 105318 105284   35  0  2   61   80    34 0.807  -0.71
 2.00 Prom - 105646 105607   40                              -9.35

 3.00 Prom + 106614 106653   40                             -10.25
 3.01 Init + 107720 107728    9  1  0   55   61     0 0.228  -5.36
 3.02 Intr + 109137 109271  135  2  0   90  103    40 0.543   5.54
 3.03 Intr + 109551 109617   67  2  1   67   61    69 0.713  -0.34
 3.04 Intr + 109999 110127  129  2  0   93  100    82 0.777   9.65
 3.05 Intr + 110222 110428  207  0  0   13  110   174 0.549  10.23
 3.06 Intr + 110799 110936  138  1  0    8   92    92 0.256   1.11
 3.07 Intr + 116955 117033   79  1  1   13   81   117 0.026   1.19
 3.08 Intr + 120568 120712  145  1  1   36   91   134 0.999   7.86
 3.09 Intr + 124394 124478   85  1  1   45  115    57 0.997   2.57
 3.10 Intr + 127347 127592  246  1  0   47   45   278 0.453  15.91
 3.11 Intr + 133368 133562  195  1  0   71   11   122 0.533   1.26
 3.12 Intr + 137670 137723   54  1  0   88   92    79 0.982   6.33
 3.13 Intr + 139568 139708  141  0  0   81   68    72 0.923   3.90
 3.14 Intr + 139953 140145  193  1  1   72  121   237 0.998  23.03
 3.15 Term + 144362 144590  229  2  1   65   52   274 0.999  16.62
 3.16 PlyA + 144921 144926    6                               1.05

 4.00 Prom + 145570 145609   40                              -6.85
 4.01 Init + 154746 154964  219  2  0   71   73   296 0.972  25.08
 4.02 Intr + 169246 169350  105  0  0   51   98    48 0.014   1.59
 4.03 Intr + 185260 185298   39  0  0  138   61    45 0.027   4.30
 4.04 Intr + 187694 187838  145  1  1   -6   98   125 0.022   3.03
 4.05 Term + 198481 198593  113  2  2  102   32    81 0.856   1.64
 4.06 PlyA + 199654 199659    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  58206  57847  360  0  0   46   99   181 0.835  11.23
S.002 Init + 116957 117033   77  1  2   91   81   115 0.969  11.71
S.003 Term + 155017 155073   57  0  0   95   39    59 0.823  -1.59


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815577r:25624643_25829794|GENSCAN_predicted_peptide_1|353_aa
MARRSRHRLLLLLLRYLVVALGYHKAYGFSAPKDQQVVTAVEYQEAILACKTPKKTVSSR
LEWKKLGRSVSFVYYQQTLQGDFKNRAEMIDFNIRIKNVTRSDAGKYRCEVSAPSEQGQN
LEEDTVTLEVLGDVHVLAPAVPSCEVPSSALSGTVVELRCQDKEGNPAPEYTWFKDGIRL
LENPRLGSQSTNSSYTMNTKTGTLQFNTVSKLDTGEYSCEARNSVGYRRCPGKRMQVDDL
NISGIIAAVVVVALVISVCGLGVCYAQRKGYFSKRRKRDGSYAQGFALCVYFHSWELKAT
SKEMPNGWSPQVCTTGFAWLSIASQRLSPGTSTLQYPLSHNVNLSSSKGSFSL

>gi568815577r:25624643_25829794|GENSCAN_predicted_CDS_1|1062_bp
atggcgaggaggagccgccaccgcctcctcctgctgctgctgcgctacctggtggtcgcc
ctgggctatcataaggcctatgggttttctgccccaaaagaccaacaagtagtcacagca
gtagagtaccaagaggctattttagcctgcaaaaccccaaagaagactgtttcctccaga
ttagagtggaagaaactgggtcggagtgtctcctttgtctactatcaacagactcttcaa
ggtgattttaaaaatcgagctgagatgatagatttcaatatccggatcaaaaatgtgaca
agaagtgatgcggggaaatatcgttgtgaagttagtgccccatctgagcaaggccaaaac
ctggaagaggatacagtcactctggaagtattaggtgatgtgcatgtattggctccagca
gttccatcatgtgaagtaccctcttctgctctgagtggaactgtggtagagctacgatgt
caagacaaagaagggaatccagctcctgaatacacatggtttaaggatggcatccgtttg
ctagaaaatcccagacttggctcccaaagcaccaacagctcatacacaatgaatacaaaa
actggaactctgcaatttaatactgtttccaaactggacactggagaatattcctgtgaa
gcccgcaattctgttggatatcgcaggtgtcctgggaaacgaatgcaagtagatgatctc
aacataagtggcatcatagcagccgtagtagttgtggccttagtgatttccgtttgtggc
cttggtgtatgctatgctcagaggaaaggctacttttcaaaaaggaggaagcgggatggg
tcttatgcccaaggatttgcactttgtgtttacttccattcctgggaactaaaagcaaca
tcaaaagaaatgcctaatggctggagcccacaggtgtgcaccacaggatttgcctggctt
tcaatagcatctcaacgtttatctccgggaacttccaccctccagtaccctctcagtcac
aacgtcaatctctccagttccaaaggctccttttccctctaa

>gi568815577r:25624643_25829794|GENSCAN_predicted_peptide_2|122_aa
MGNKEEKGTVVRISMILQRLFRFSSVIRSAVSVHLRRNIGVTAVAFNKELDPIQKLFVDK
IREYKSKRQTSGGPVDASSEYQQELERELFKLKQMFGNADMNTFPTFKFEDPKFEVIEKP
QA

>gi568815577r:25624643_25829794|GENSCAN_predicted_CDS_2|369_bp
atggggaataaggaggagaagggaactgtggtcagaatcagcatgattcttcagaggctc
ttcaggttctcctctgtcattcggtcagccgtctcagtccatttgcggaggaacattggt
gttacagcagtggcatttaataaggaacttgatcctatacagaaactctttgtggacaag
attagagaatacaaatctaagcgacagacatctggaggacctgttgatgctagttcagag
tatcagcaagagctggagagggagctttttaagctcaagcaaatgtttggtaatgcagac
atgaatacatttcccaccttcaaatttgaagatcccaaatttgaagtcatcgaaaaaccc
caggcctga

>gi568815577r:25624643_25829794|GENSCAN_predicted_peptide_3|683_aa
MSQMIKLYLRKIKLHVFSQLICSKSDCIDVTPSATRVKSTFIVSIIHHYHRVPREHMIAS
DMIRKTGEGNKRVSILFLGLRQTPRSTNVEVSCDPGPGREGPQDTELLSPPSKVPSCQSL
RRHHLRSTSGPGSAPTRLPAIAMHYGPPFQSVDAHRTGSVSETVCDRTGLGETEAKQEEE
VEGPWDLTLLVAGAAGLTRRDAARGALAAAVLSRLWSAGGGDRADSGVAMTKREAEELIE
IEIDGTEKAECTEESIVEQTYAPAECVSQAIDINEPIGNLKKLLEPRLQCSLDAHEICLQ
DIQLDPERSLFDQGVKTDGTVQLSVQVISYQGIEPKLNILEIVKPADTVEVVIDPDAHHA
ESEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERLGIPYDPIQWST
DQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPRGEILWSHLELLRKYV
LASQEQQMNEIVTIDQPVQIIPASVQSATPTTIKVINSSAKAAKVQRAPRISGEDRSSPG
NRTGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNY
EKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVTECEQKKLAKMQL
HGIAQPVTAVALATASLQTEKDN

>gi568815577r:25624643_25829794|GENSCAN_predicted_CDS_3|2052_bp
atgagccagatgataaaactgtatctaagaaagattaagctgcacgtattctcacagtta
atttgctctaagtctgactgcatagatgttactccttctgcaacacgggtaaaatccact
ttcattgtttcaattatccaccattaccatcgggtgccacgagagcatatgatagcgtct
gacatgatcagaaagactggggaaggcaacaagagggtatcgatcttatttctgggtcta
cggcaaactccaaggtctacaaacgtagaggtcagctgtgaccccgggccaggccgtgaa
ggtccccaggacacagagctgctctctcctcctagtaaagtcccgagctgccaaagcctc
cgccgccaccacctccgctctacttccggccctggctccgcccccacacgcctacccgcc
atcgcaatgcattatgggccgccgtttcagtcggtcgacgctcaccggacaggaagcgtc
tcggagacagtctgcgaccggacgggtctaggtgagacagaagccaaacaggaggaggaa
gtggaggggccctgggacctcacacttctagtcgcgggagctgcaggtcttacccggaga
gacgctgcacgtggagccctcgccgctgccgttctcagccggctctggagtgcgggcggg
ggcgacagggccgattccggagtggccatgactaaaagagaagcagaggagctgatagaa
attgagattgatggaacagagaaagcagagtgcacagaagaaagcattgtagaacaaacc
tacgcgccagctgaatgtgtaagccaggccatagacatcaatgaaccaataggcaattta
aagaaactgctagaaccaagactacagtgttctttggatgctcatgaaatttgtctgcaa
gatatccagctggatccagaacgaagtttatttgaccaaggagtaaaaacagatggaact
gtacagcttagtgtacaggtaatttcttaccaaggaattgaaccaaagttaaacatcctt
gaaattgttaaacctgcggacactgttgaggttgttattgatccagatgcccaccatgct
gaatcagaagcacatcttgttgaagaagctcaagtgataactcttgatggcacaaaacac
atcacaaccatttcagatgaaacttcagaacaagtgacaagatgggctgctgcactggaa
ggctataggaaagaacaagaacgccttgggataccctatgatcccatacagtggtccaca
gaccaagtcctgcattgggtggtttgggtaatgaaggaattcagcatgaccgatatagac
ctcaccacactcaacatttcggggagagaattatgtagtctcaaccaagaagattttttt
cagcgggttcctcggggagaaattctctggagtcatctggaacttctccgaaaatatgta
ttggcaagtcaagaacaacagatgaatgaaatagttacaattgatcaacctgtgcaaatt
attccagcatcagtgcaatctgctacacctactaccattaaagttataaatagtagtgcg
aaagcagccaaagtacaaagagcgccgaggatttcaggagaagatagaagctcacctggg
aacagaacaggaaacaatggccaaatccaactatggcagtttttgctagaacttcttact
gataaggacgctcgagactgcatttcttgggttggtgatgaaggtgaatttaagctaaat
cagcctgaactggttgcacagaaatggggacagcgtaaaaataagcctacgatgaactat
gagaaactcagtcgtgcattaagatattattacgatggggacatgatttgtaaagttcaa
ggcaagagatttgtgtacaagtttgtctgtgacttgaagactcttattggatacagtgca
gcggagttgaaccgtttggtcacagaatgtgaacagaagaaacttgcaaagatgcagctc
catggaattgcccagccagtcacagcagtagctctggctactgcttctctgcaaacggaa
aaggataattga

>gi568815577r:25624643_25829794|GENSCAN_predicted_peptide_4|206_aa
MNTPEGRNSEHIRTSEGTNSGHAAFKNCNTARVHGFMLEVGKTKNPPIPDTFWRPRRDFC
LSLSGETIAYRQACWGYMHEPPHLAMSSSFCCLSVSEVPPVIKDTSQKCDAPDPPSPSIM
INLHPEYTKNSNSMKSRQNIRTNIPIRRYKNDRLGVVAHGCNPRTCKGQGVFVRCGQAGL
RLGLRLPQQFYFCQLGYKKLCCNLVV

>gi568815577r:25624643_25829794|GENSCAN_predicted_CDS_4|621_bp
atgaacacaccggaaggaagaaactcggaacacatccgaacatcagaaggaacaaactcc
ggacacgccgcctttaagaactgtaacaccgccagggtccacggcttcatgcttgaagtt
ggtaagaccaagaacccaccaattccggacacgttttggcgaccacgaagggacttttgc
ctgtcgctgagcggtgagaccatcgcctatcgccaagcatgctggggttatatgcatgag
ccgccacacttggccatgtcatcttccttctgttgcttgtctgtatcggaagttcctccc
gttattaaggataccagtcaaaagtgtgatgctcccgatcctccttcaccttccatcatg
attaacttgcatccagaatatacaaagaactcgaactcaatgaaaagtcgacaaaatatt
cgaacaaacattccaataagacgatataaaaatgaccggctgggcgtggttgctcatggc
tgcaatcccagaacttgtaaaggccaaggtgtatttgtcaggtgtggacaggcaggtctg
cggttgggcttgcgtcttcctcaacagttctacttctgccaactgggttataaaaagctc
tgctgcaatctggtggtttaa