GENSCAN 1.0	Date run:  6-Nov-116	Time: 13:04:23

Sequence gi568815578f:44514557_44718361 : 203805 bp : 46.86% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1103   1098    6                               1.05
 1.02 Term -  11722  11661   62  2  2  112   42    20 0.345  -2.23
 1.01 Init -  17644  17131  514  1  1   53   51   284 0.800  16.27
 1.00 Prom -  22867  22828   40                              -2.06

 2.00 Prom +  34471  34510   40                              -2.16
 2.01 Init +  55610  55625   16  1  1   83   79     5 0.454  -0.53
 2.02 Term +  62360  62421   62  0  2  104   49    88 0.868   4.47
 2.03 PlyA +  64135  64140    6                               1.05

 3.03 PlyA -  66111  66106    6                               1.05
 3.02 Term -  76284  76034  251  1  2   68   48   185 0.184   8.37
 3.01 Init -  95879  95792   88  2  1   61   94    72 0.948   5.90
 3.00 Prom -  97416  97377   40                              -7.76

 4.00 Prom +  97492  97531   40                              -3.46
 4.01 Init + 100004 100151  148  1  1   96   66   226 0.631  21.45
 4.02 Term + 101963 102078  116  0  2  112   44    18 0.407  -1.47
 4.03 PlyA + 102290 102295    6                               1.05

 5.14 PlyA - 104070 104065    6                               1.05
 5.13 Term - 104723 104710   14  0  2   80   42    17 0.504  -5.34
 5.12 Intr - 105845 105743  103  2  1   81   96   108 0.999  10.65
 5.11 Intr - 106591 106462  130  0  1  123  105   227 0.999  28.60
 5.10 Intr - 108096 108032   65  0  2   72   97    47 0.998   1.52
 5.09 Intr - 108374 108273  102  2  0  105   99    86 0.999  11.77
 5.08 Intr - 108522 108451   72  0  0  110   78    67 0.959   7.50
 5.07 Intr - 109773 109646  128  1  2   55   94   189 0.986  16.60
 5.06 Intr - 111128 111013  116  1  2   95   81   171 0.999  17.19
 5.05 Intr - 112043 111900  144  1  0  102   61   202 0.998  18.30
 5.04 Intr - 114613 114491  123  0  0   99   77   180 0.998  17.70
 5.03 Intr - 120329 120186  144  1  0   33  119    35 0.162   0.50
 5.02 Intr - 121732 121671   62  1  2  152  111    39 0.326  10.13
 5.01 Init - 137051 137019   33  2  0  120   61    75 0.372   7.87
 5.00 Prom - 146997 146958   40                              -4.36

 6.00 Prom + 147119 147158   40                              -7.36
 6.01 Init + 148967 149000   34  1  1   83   99    51 0.599   5.73
 6.02 Intr + 157464 157598  135  1  0  100   80    24 0.455   3.34
 6.03 Intr + 161245 161358  114  2  0   76   30   108 0.581   4.22
 6.04 Intr + 165471 165524   54  1  0   82   93    32 0.262   2.05
 6.05 Term + 175373 175542  170  0  2   91   47    94 0.348   3.64
 6.06 PlyA + 176806 176811    6                               1.05

 7.04 PlyA - 177466 177461    6                               1.05
 7.03 Term - 187474 187453   22  0  1  118   43    31 0.124  -0.62
 7.02 Intr - 196777 196697   81  0  0   84   72    58 0.079   2.55
 7.01 Init - 197282 197239   44  2  2   81   64    47 0.164   1.49
 7.00 Prom - 198076 198037   40                              -3.26

 8.03 PlyA - 198128 198123    6                               1.05
 8.02 Term - 201990 201811  180  0  0  107   48   157 0.997  11.21
 8.01 Intr - 202102 202069   34  0  1   81  105    20 0.723   1.23

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 131524 131603   80  1  2   83   53    49 0.938   0.09


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:44514557_44718361|GENSCAN_predicted_peptide_1|191_aa
MATNIINSRKRTLPERGAGSKGVGGAVPGAAEGQRSGRSLPPRDPRRLSPSPPATCRRQA
RSVGAATGRPAPAHLRSRRLSVPGPPVRSASPGQPSARSPQPAAEPVALATWAAELPRHS
RYGGSDGTRTVRVPFRSRGGGRGGTKWESRAELRRRDPGWNLARGRYGKGDSIFMACFLG
SLMSVLQCQAL

>gi568815578f:44514557_44718361|GENSCAN_predicted_CDS_1|576_bp
atggctacaaatataataaacagccgaaaacggactctccctgaacgcggggcggggtca
aagggcgtcgggggcgccgtccccggcgcggctgagggacaaagatcgggccgcagcctc
cctccccgggatccccggcggctcagcccctcgccccctgcgacgtgtcgacgccaggcc
cggagcgttggggccgcaaccggccgcccggctcctgctcacctgcggtctcgccgcctc
tccgtgcctgggccgccggtccgcagcgcctccccggggcagcctagcgcccgcagcccg
caacccgcagcggagcccgttgccttggcgacctgggctgccgaactcccgcggcactcg
cgctacggcggctcggatgggaccaggacggttcgcgtccccttccgcagccgcggaggg
ggcagaggagggacgaagtgggagtcgagggctgagctgcgaaggagggatccgggttgg
aacttggcccggggaagatacggaaagggggacagtatctttatggcttgcttcctcggt
tccctcatgtctgtgctccagtgtcaagccctctaa

>gi568815578f:44514557_44718361|GENSCAN_predicted_peptide_2|25_aa
MDCEPDTPNQQSKGDHKVDPQDIEP

>gi568815578f:44514557_44718361|GENSCAN_predicted_CDS_2|78_bp
atggactgtgagccagacacaccaaatcagcagtccaaaggggaccacaaagtggatcct
caggacatcgaaccctga

>gi568815578f:44514557_44718361|GENSCAN_predicted_peptide_3|112_aa
MEGKAHIPPQHLAQKKHLKNELGALKDQTAFSPHTILSLWTDAQWIRQALQSDALIPRLF
SLFVKIPAMEKVQVGVGQSRIAFNSDTLTTTSMDADGCLVGEKISVDPVLPT

>gi568815578f:44514557_44718361|GENSCAN_predicted_CDS_3|339_bp
atggagggcaaggcccacatccccccacaacacctagctcagaagaaacacctaaagaat
gaattaggggccctcaaagatcagacagctttcagtcctcacaccatccttagcttatgg
acagatgcacagtggattcggcaagctcttcagagcgatgcgctcatccccaggctcttt
agcctctttgtgaaaattccagctatggagaaggtccaggtgggtgtaggccaatctaga
atagccttcaattctgataccttaacaaccacatccatggatgctgatggatgcctggtg
ggtgaaaagatctctgtggacccagtacttccaacttga

>gi568815578f:44514557_44718361|GENSCAN_predicted_peptide_4|87_aa
MEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAAVVAAGPCAQA
LLTPVFPDSDSLKYGSSGYMTFTCQGD

>gi568815578f:44514557_44718361|GENSCAN_predicted_CDS_4|264_bp
atggaggtcgagtcctcctactcggacttcatctcctgtgaccggacaggccgtcggaat
gcggtccctgacatccagggagactcagaggctgtgagcgtgaggaagctggctggagac
atgggcgagctggcactcgagggggcagcagttgtagctgctggcccatgtgcccaggct
ctcctaacacctgttttccctgactcagattccctaaagtatgggtcctctggctacatg
acattcacctgccagggtgactga

>gi568815578f:44514557_44718361|GENSCAN_predicted_peptide_5|411_aa
MAQTPAFDKPKVELHVHLDGSIKPETILYYGSSGPKFEHFCSISQNPVIQRPALMERMRD
PGGLPPTLGSISTNSLRDFWRRGIALPANTAEGLLNVIGMDKPLTLPDFLAKFDYYMPAI
AGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVAL
VGQGLQEGERDFGVKARSILCCMRHQPNWSPKVVELCKKYQQQTVVAIDLAGDETIPGSS
LLPGHVQAYQEAVKSGIHRTVHAGEVGSAEVVKEAVDILKTERLGHGYHTLEDQALYNRL
RQENMHFEICPWSSYLTGAWKPDTEHAVIRLKNDQANYSLNTDDPLIFKSTLDTDYQMTK
RDMGFTEEEFKRLNINAAKSSFLPEDEKRELLDLLYKAYGMPPSASAGFKE

>gi568815578f:44514557_44718361|GENSCAN_predicted_CDS_5|1236_bp
atggcccagacgcccgccttcgacaagcccaaagtggaactgcatgtccacctagacgga
tccatcaagcctgaaaccatcttatactatggcagctcgggacccaaatttgaacatttc
tgctccataagccagaatcctgttattcagaggcctgccctcatggagagaatgagggat
cccggggggttgcccccaactctcgggagcatctccaccaactccctgagagatttctgg
aggagagggatcgccctcccagctaacacagcagaggggctgctgaacgtcattggcatg
gacaagccgctcacccttccagacttcctggccaagtttgactactacatgcctgctatc
gcgggctgccgggaggctatcaaaaggatcgcctatgagtttgtagagatgaaggccaaa
gagggcgtggtgtatgtggaggtgcggtacagtccgcacctgctggccaactccaaagtg
gagccaatcccctggaaccaggctgaaggggacctcaccccagacgaggtggtggcccta
gtgggccagggcctgcaggagggggagcgagacttcggggtcaaggcccggtccatcctg
tgctgcatgcgccaccagcccaactggtcccccaaggtggtggagctgtgtaagaagtac
cagcagcagaccgtggtagccattgacctggctggagatgagaccatcccaggaagcagc
ctcttgcctggacatgtccaggcctaccaggaggctgtgaagagcggcattcaccgtact
gtccacgccggggaggtgggctcggccgaagtagtaaaagaggctgtggacatactcaag
acagagcggctgggacacggctaccacaccctggaagaccaggccctttataacaggctg
cggcaggaaaacatgcacttcgagatctgcccctggtccagctacctcactggtgcctgg
aagccggacacggagcatgcagtcattcggctcaaaaatgaccaggctaactactcgctc
aacacagatgacccgctcatcttcaagtccaccctggacactgattaccagatgaccaaa
cgggacatgggctttactgaagaggagtttaaaaggctgaacatcaatgcggccaaatct
agtttcctcccagaagatgaaaagagggagcttctcgacctgctctataaagcctatggg
atgccaccttcagcctctgcaggttttaaggagtaa

>gi568815578f:44514557_44718361|GENSCAN_predicted_peptide_6|168_aa
MEDGKQAIKSSDERERVFSLAQSHADNRRLHEPDLQEGSRAVPREDPQWNYQADSPGKME
RTNGLFKTHLTKLSLQLKKEDSVKDTAQKLNNQAKTLYLSAVSPAADPPLAPGPPGGWSG
LSSKKLELDVGFLRAEEGLARDLQKEKCIPPRVKSEGALQQWPSVGHL

>gi568815578f:44514557_44718361|GENSCAN_predicted_CDS_6|507_bp
atggaggatgggaagcaggccatcaagagttctgatgaacgggaaagagttttttctcta
gcccaatctcacgctgataaccgccggcttcatgaacctgacctccaggaaggcagtaga
gcagttccccgagaggacccccaatggaactatcaggcagattccccaggaaagatggaa
cggactaatggtcttttcaagacacacctcaccaagctcagcctccaacttaaaaaggag
gactctgtcaaggatacagcccaaaaactcaacaaccaagcaaaaaccctgtacctatca
gcagtcagtcctgcagccgacccccctctggccccagggcctcctggagggtggagtggt
cttagcagcaagaagctggagttggatgttggattcctgagggccgaggaaggacttgca
agggacctccagaaggagaagtgcatcccccccagggtcaagagtgagggagccctgcag
caatggccatctgtgggacatctgtga

>gi568815578f:44514557_44718361|GENSCAN_predicted_peptide_7|48_aa
MSIAEQGDLDNEEVRRKHKLRSQQVRASNPGSRYRLTGLGPGLDRVLL

>gi568815578f:44514557_44718361|GENSCAN_predicted_CDS_7|147_bp
atgtccatagcagagcaaggagaccttgacaatgaggaggtgaggaggaagcacaagctc
agaagtcaacaggtccgagcttcaaatcccggctcccgctaccgacttacagggctggga
ccagggttggaccgcgtgctcctctga

>gi568815578f:44514557_44718361|GENSCAN_predicted_peptide_8|71_aa
XPCFLGPGKNGPSPKSPIPTTQATHTGIMPYPSPLEEQTAGQDASVVLRLPRHEDLEPEG
EKLLPVLLKGA

>gi568815578f:44514557_44718361|GENSCAN_predicted_CDS_8|216_bp
nntccctgcttcctgggaccagggaagaatggtcccagccccaagtcccctattccaact
acccaagccacccacactggcatcatgccctacccatcccctttggaagaacaaacagca
ggacaggatgccagcgtggttctcaggcttcccaggcacgaagacttggagcctgaggga
gagaagctcctgcccgtgctcctcaaaggagcgtga