GENSCAN 1.0	Date run:  8-Nov-116	Time: 04:47:02

Sequence gi568815578r:44086326_44286705 : 200380 bp : 46.76% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3900   4028  129  2  0   66   72    85 0.536   5.59
 1.02 Term +   4735   4842  108  0  0   52   36    81 0.408  -2.19
 1.03 PlyA +   5929   5934    6                               1.05

 2.00 Prom +  14977  15016   40                               2.04
 2.01 Init +  19724  19802   79  1  1   56   64    63 0.725   1.92
 2.02 Term +  20728  20741   14  2  2  144   38     5 0.277  -0.54
 2.03 PlyA +  21802  21807    6                               1.05

 3.06 PlyA -  25394  25389    6                               1.05
 3.05 Term -  28551  28471   81  0  0   80   47   131 0.766   5.89
 3.04 Intr -  30061  29322  740  2  2   90   75  1025 0.654  92.56
 3.03 Intr -  32298  32180  119  2  2   86   91   144 0.999  14.61
 3.02 Intr -  37704  37655   50  0  2   99  101   -10 0.421  -1.12
 3.01 Init -  39233  39180   54  2  0   54   86    71 0.301   4.79
 3.00 Prom -  42237  42198   40                              -4.66

 4.00 Prom +  44380  44419   40                              -5.26
 4.01 Sngl +  49994  50179  186  1  0   84   37   268 0.829  16.39
 4.02 PlyA +  52509  52514    6                               1.05

 5.00 Prom +  56647  56686   40                              -7.36
 5.01 Init +  56729  56867  139  1  1   40   48    74 0.351  -1.10
 5.02 Intr +  62152  62292  141  2  0  111   65   109 0.872  11.22
 5.03 Intr +  62883  63070  188  1  2   81   31    56 0.235  -1.39
 5.04 Term +  68244  68405  162  2  0   84   48    62 0.397  -0.26
 5.05 PlyA +  69874  69879    6                               1.05

 6.04 PlyA -  70047  70042    6                               1.05
 6.03 Term -  74082  73289  794  1  2  137   48  1746 0.792 168.96
 6.02 Intr -  84090  83987  104  2  2   46   63   116 0.251   4.72
 6.01 Init -  89642  89578   65  2  2   99   96    21 0.528   4.64
 6.00 Prom -  93441  93402   40                              -8.56

 7.03 PlyA -  93997  93992    6                               1.05
 7.02 Term -  95245  95123  123  1  0   85   43    96 0.444   3.18
 7.01 Init - 100380  99976  405  0  0   52   59   512 0.414  41.29
 7.00 Prom - 105492 105453   40                              -4.56

 8.06 PlyA - 107657 107652    6                               1.05
 8.05 Term - 111414 110727  688  2  1  108   44   253 0.795  15.98
 8.04 Intr - 116749 116636  114  0  0  102   94    27 0.568   4.26
 8.03 Intr - 125553 125418  136  1  1   26   24   106 0.001  -2.37
 8.02 Intr - 131306 131242   65  1  2   62  103    75 0.089   4.76
 8.01 Init - 142100 142009   92  2  2   49   38   121 0.344   3.16
 8.00 Prom - 147896 147857   40                              -4.26

 9.00 Prom + 149767 149806   40                              -5.56
 9.01 Init + 158647 158774  128  0  2   28  105    38 0.155  -0.87
 9.02 Intr + 158867 158913   47  2  2   73  110     1 0.382  -1.15
 9.03 Intr + 160778 160877  100  0  1  106  117    55 0.926   9.37
 9.04 Intr + 161048 161189  142  2  1   63   75   126 0.964   9.16
 9.05 Intr + 170828 171020  193  1  1   96   80   506 0.998  49.67
 9.06 Intr + 172109 172282  174  0  0   59   73   388 0.638  34.31
 9.07 Intr + 176905 177002   98  2  2   69  101   156 0.996  14.73
 9.08 Intr + 178120 178234  115  0  1  117   59   244 0.980  24.42
 9.09 Term + 192632 192975  344  0  2  126   49   493 0.900  43.87
 9.10 PlyA + 194029 194034    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 123526 123533    8  0  2   57  102    23 0.820  -0.35


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:44086326_44286705|GENSCAN_predicted_peptide_1|78_aa
THHHENKPMLACWMMRDPAEKRKVPQLTSESPVPIQQPTSDVRPCQEMPHSPTFGSEQAG
RVIFQLDTAGDDQDSDPG

>gi568815578r:44086326_44286705|GENSCAN_predicted_CDS_1|237_bp
acccatcaccatgagaacaagcccatgctagcctgttggatgatgagagaccctgcagag
aaaaggaaggtgccccagctgacatcagaaagccctgtgcccatccagcagccaacttca
gatgtacgaccttgccaggaaatgccccacagtcccacatttggaagtgaacaagctgga
agggtgattttccaactggacacagctggtgacgatcaagatagtgaccctggataa

>gi568815578r:44086326_44286705|GENSCAN_predicted_peptide_2|30_aa
MAATAPSISTHDPQPASKSKNKGESQGFDP

>gi568815578r:44086326_44286705|GENSCAN_predicted_CDS_2|93_bp
atggctgccacagctccaagcatcagcacccacgacccccaacctgcatccaaaagcaag
aataagggggaaagccaaggttttgatccctaa

>gi568815578r:44086326_44286705|GENSCAN_predicted_peptide_3|347_aa
MTDLAQKWYQEGSSLVSWGQSHPPDPHPEAWIQRWTSHAKAKAEAAEQAALAANQESNIA
RTLARELAPDFYQPGPEYQKRRLLQEILENSESLLEPPDRGAGAAGLPQPPRESPQLHER
ETPRPEGGSPSPAGTPPQPKRPRPGVSKDGLLSPGAWNGEPSGEGSRSVTPSEGAGRRSP
ARPATERMAIEALQAPPAPSREPEVALYQGYHSYAVRTTPPEPPPFEDQPEPEVSGSESA
PSSPATAPLQAPTLRGPEPARETPAKLEPKPIIPKAEPRAKARKTEARGLTKAGAKKKAR
KEAALAAEAEVEVEEVRLSGKVPNTILICMVILLNIGLAILFVHLLT

>gi568815578r:44086326_44286705|GENSCAN_predicted_CDS_3|1044_bp
atgacggacctggctcagaagtggtaccaggaaggcagcagcttggtgtcatggggtcag
agccatcctccagaccctcacccagaggcatggatccagagatggacaagccacgccaag
gccaaagctgaggcagcggaacaggccgccctggctgccaaccaggagtccaacattgct
cgcactttggccagggagctggctccggacttctaccagccaggtccggaatatcagaag
cgccggctgctgcaggagatcctggagaactcggagagcctgctggagccccccgaccgg
ggcgccggcgcagcgggcctcccacagccgccccgcgagagcccgcagctgcacgagcgt
gagacccctcggcccgagggtggctccccgtcaccggccgggacgcccccgcagcccaag
cggcccaggcccggggtgtccaaggacggcctgctgagcccaggcgcctggaacggcgag
cccagcggtgagggcagccggtcagtcactccgtccgagggcgcgggccgccgcagcccc
gcgcgtccagccaccgagcgcatggccatcgaggctctgcaggcaccgcctgcgccgtcg
cgggagccggaggtggcgctttaccagggctaccacagctatgctgtgcgcaccacgccg
cccgagcccccaccctttgaggaccagcccgagcccgaggtctccgggtccgagtccgcg
ccctcgtccccggccaccgccccgctgcaggcccccacgctccgaggccccgagcctgca
cgcgagacccccgccaagctggagcccaagcccatcatccccaaagccgagcccagggcc
aaggcccgcaagactgaggctcgagggctgaccaaggcgggggccaagaagaaggcgcgg
aaggaggccgcactggcggcagaggcggaggtggaggtggaagaggtgaggctgtcgggc
aaggtccccaacaccatcctcatctgcatggtgatcctgctgaacatcggcctggccatc
ctctttgttcacctcctgacctga

>gi568815578r:44086326_44286705|GENSCAN_predicted_peptide_4|61_aa
MTVTVLLQGDEVCWKMASPFAYSAPWVQPSKRMLNPLGLIAIIIININITIMNRQCLLRT
Y

>gi568815578r:44086326_44286705|GENSCAN_predicted_CDS_4|186_bp
atgactgtcaccgtgctcctgcagggggacgaagtctgctggaaaatggcctcacccttt
gcctattctgctccctgggtgcaacccagcaagaggatgctgaatcccctgggactcatc
gccatcatcatcatcaacatcaacatcaccattatgaataggcaatgcttgctgcgcacc
tactag

>gi568815578r:44086326_44286705|GENSCAN_predicted_peptide_5|209_aa
MKRAGVRERVKEKHFGQMEQHVQRTAGRKENGPLKETWLKANDGESDEERECGEETRKGN
KGFFVSFPPADNVLDAERGNVLGEGDPSCRVALVALPCFMSPPSPQIPALASSLTPSLQP
SPCHTLATRAMVQVWSYTFGQTAPSSRGYPLTKRGRKRCPDRSLRADKFHMSPEGGAGSH
NGEKARACLGVKRLWLLGMLSVSPQPNYS

>gi568815578r:44086326_44286705|GENSCAN_predicted_CDS_5|630_bp
atgaaaagagcaggtgttcgtgagagagtaaaggaaaagcattttggacaaatggaacag
catgtgcaaaggactgcaggcaggaaagagaacggccctttgaaggaaacatggctgaag
gcaaatgatggggagagtgatgaggaaagggagtgtggtgaggaaacaaggaaaggaaac
aaagggttcttcgtttctttcccacctgctgacaacgtcctggatgcagaaaggggaaat
gtgttgggcgaaggcgacccgagctgccgcgtggccttagtggctctgccatgtttcatg
tctccaccatctccccagatccctgcattagcctcctcactgacgcccagcctacagcct
agcccttgccatactctcgctacaagagccatggtccaggtgtggtcatacacatttggg
cagaccgctcccagctctcgtggctacccactcacaaagcggggcaggaaaagatgtcct
gatcgtagcctccgggctgacaaattccacatgagcccggagggaggagctggaagccac
aatggagagaaagcccgggcctgcctgggtgtgaagaggctgtggctgctggggatgctt
tctgtctctccacagccaaattactcatga

>gi568815578r:44086326_44286705|GENSCAN_predicted_peptide_6|320_aa
MGERCLLEVSMGIGFLGRPVHRSYANIWYYVRGLGEGSAMAGRQNRQDKDKRAAMGRTYQ
GQFTNGMRHGYGVRQSVPYGMAVVVRSPLRTSLSSLRSEHSNGTVAPDSPASPASDGPAL
PSPAIPRGGFALSLLANAEAAARAPKGGGLFQRGALLGKLRRAESRTSVGSQRSRVSFLK
SDLSSGASDAASTASLGEAAEGADEAAPFEADIDATTTETYMGEWKNDKRSGFGVSERSS
GLRYEGEWLDNLRHGYGCTTLPDGHREEGKYRHNVLVKDTKRRMLQLKSNKVRQKVEHSV
EGAQRAAAIARQKAEIAASR

>gi568815578r:44086326_44286705|GENSCAN_predicted_CDS_6|963_bp
atgggtgagagatgcctgttggaagtgtccatgggcattgggtttctgggcaggcctgtg
cacagatcttatgccaacatctggtactatgtgagaggacttggagaaggatcagcgatg
gctggtagacaaaacaggcaagataaagacaagagagctgccatgggaaggacgtaccaa
ggccagttcaccaacggcatgcgccatggctacggagtacgccagagcgtgccctacggg
atggccgtggtggtgcgctcgccgctgcgcacgtcgctgtcgtccctgcgcagcgagcac
agcaacggcacggtggccccggactctcccgcctcgccggcctccgacggccccgcgctg
ccctcgcccgccatcccgcgtggcggcttcgcgctcagcctcctggccaatgccgaggcg
gccgcgcgggcgcccaagggcggcggcctcttccagcggggcgcgctgctgggcaagctg
cggcgcgcagagtcgcgcacgtccgtgggtagccagcgcagccgtgtcagcttccttaag
agcgacctcagctcgggcgccagcgacgccgcgtccaccgccagcctgggagaggccgcc
gagggcgccgacgaggccgcacccttcgaggccgatatcgacgccaccaccaccgagacc
tacatgggcgagtggaagaacgacaaacgctcgggcttcggcgtgagcgaacgctccagt
ggcctccgctacgagggcgagtggctggacaacctgcgccacggctatggctgcaccacg
ctgcccgacggccaccgcgaggagggcaagtaccgccacaacgtgctggtcaaggacacc
aagcgccgcatgctgcagctcaagagcaacaaggtccgccagaaagtggagcacagtgtg
gagggtgcccagcgcgccgctgctatcgcgcgccagaaggccgagattgccgcctccagg
tag

>gi568815578r:44086326_44286705|GENSCAN_predicted_peptide_7|175_aa
MSGGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTF
EGYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGT
ETYADGGEASWGPAESNATKETAVFQTGEDNALVDGEVNSVGHDLHFSKGKNRTE

>gi568815578r:44086326_44286705|GENSCAN_predicted_CDS_7|528_bp
atgagtgggggccgcttcgactttgatgatggaggggcgtactgcgggggctgggagggg
ggaaaggcccatgggcatggactgtgcacaggccccaagggccagggcgaatactctggc
tcctggaactttggctttgaggtggcaggtgtctacacctggcccagcggaaacaccttt
gagggatactggagccagggcaaacggcatgggctgggcatagagaccaaggggcgctgg
ctctacaagggcgagtggacacatggcttcaagggacgctacggaatccggcagagctca
agcagcggtgccaagtatgagggcacctggaacaatggcctgcaagacggctatggcacc
gagacctatgctgatggaggtgaggccagctgggggcccgcagagtcaaatgctacaaag
gaaacagcagtcttccaaactggagaggacaacgcattagtggatggtgaagtcaattca
gtgggtcacgacctgcatttttcaaaaggaaagaacagaacagaatag

>gi568815578r:44086326_44286705|GENSCAN_predicted_peptide_8|364_aa
MGDWNLKHGWILKARTEDFLLYLIKEKHTGTQVIHKSRVFHSFEATVKGFTNGVGHNQRH
PTQLRKIICSHEALSSADVELEIGRRGEAQLDQQNQSWSVASLSVGEGTGVRAPVRTATD
DTKPKTTCASKDSWHGSTRKSSRGAVRTQRRRRSKSPVLHPPKFIHCSTIASSSSSQLKH
KSQTDSPDGSSGLGISSPKEFSAGESSTSLDANHTGAVVEPLRTSVPRLPSESKKEDSSD
ATQVPQASLKASDLSDFQSVSKLNQGKPCTCIGKECQCKRWHDMEVYSFSGLQSVPPLAP
ERRSTLEDYSQSLHARTLSGSPRSCSEQARVFVDDVTIEDLSGYMEYYLYIPKKMSHMAE
MMYT

>gi568815578r:44086326_44286705|GENSCAN_predicted_CDS_8|1095_bp
atgggagactggaacctgaagcacggatggattctcaaggcccgcactgaggacttcctt
ctatacctcatcaaggaaaaacacacaggcacgcaagtgatccacaaatcccgggtcttc
cacagttttgaagccacagtgaagggcttcaccaacggggtgggccacaatcaacgccat
ccaactcaattgcgcaaaatcatctgttctcacgaagctttgagcagtgcagacgtggag
ctggagattggcaggcgaggagaggcacagctagatcagcagaaccagtcctggtctgta
gcatctctgtctgttggagaaggcacaggtgtcagagcaccagtcagaacagcaacagat
gataccaaacctaaaaccacatgtgcatctaaagacagttggcacgggtctacaaggaag
tcttcacgaggagcagtgagaactcagcgtcgtcgacgttctaagtctcctgtccttcat
cctccaaagtttatacattgcagtacaatagcgtcttcttccagcagtcaactcaagcac
aaaagccagactgactcacctgatggcagcagtgggctgggaatttcatcccctaaagag
ttcagtgcaggagaaagctctacttctctcgatgctaatcacacaggggcagtcgttgag
cctttgagaacttctgttccaaggctcccatcagagagtaagaaggaagactcctctgac
gctacccaagtcccccaagcaagtctcaaagccagtgatctctctgactttcaatcagtt
tccaagctaaaccagggcaagccatgcacatgcataggcaaggaatgccagtgtaagaga
tggcatgatatggaagtgtattccttttcaggcctgcagagtgtccctcccttggctcca
gaacgaagatccacacttgaggactactctcagtcgctgcacgccagaactctgtctggc
tctccccgatcctgttctgagcaagctcgagtcttcgtggatgatgtgaccattgaggac
ctgtcaggctacatggagtattacttgtatattcccaagaaaatgtcccacatggcagaa
atgatgtacacctga

>gi568815578r:44086326_44286705|GENSCAN_predicted_peptide_9|446_aa
MGRESEESWGFYGQQHSSLLPTFIGHKSVMLSPHLNAKWSSPCYHYLYFTDDEPNLREGS
LTLRAGGFSGAGQGEEEKGAPGIPSPPPPTARWWPISALESDAAKPAEAPDAPEAASPAH
WPRESLVLYHWTQSFSSQKVRLVIAEKGLVCEERDVSLPQSEHKEPWFMRLNLGEEVPVI
IHRDNIISDYDQIIDYVERTFTGEHVVALMPEVGSLQHARVLQYRELLDALPMDAYTHGC
ILHPELTTDSMIPKYATAEIRRHLANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKILEH
DDVSYLKKILGELAMVLDQIEAELEKRKLENEGQKCELWLCGCAFTLADVLLGATLHRLK
FLGLSKKYWEDGSRPNLQSFFERVQRRFAFRKVLGDIHTTLLSAVIPNAFRLVKRKPPSF
FGASFLMGSLGGMGYFAYWYLKKKYI

>gi568815578r:44086326_44286705|GENSCAN_predicted_CDS_9|1341_bp
atgggaagagagagtgaagaatcatggggattttatgggcagcagcattcctcacttctg
cccacattcattggccacaagtcagtcatgttgtcacctcacctcaatgcaaagtggagc
agtccctgttatcattatctctatttcacagatgatgagccgaatctcagggaggggagc
ctgacactgagggctggcggcttttctggcgcgggccagggggaggaggagaaaggagct
cccgggatcccctcgccccctcccccaactgcccgctggtggcccatctccgcgctggag
agcgatgcggccaagccagcggaggcccccgacgctcccgaggcggccagccccgcccat
tggcccagggagagcctggttctgtaccactggacccagtccttcagctcgcagaaggtg
cggctggtgatcgccgagaagggcctggtgtgcgaggagcgggacgtgagcctgccacag
agcgagcacaaggagccctggttcatgcggctcaacctgggcgaggaggtgcccgtcatc
atccaccgcgacaacatcatcagtgactatgaccagatcattgactatgtggagcgcacc
ttcacaggagagcacgtggtggccctgatgcccgaggtgggcagcctgcagcacgcacgg
gtgctgcagtaccgggagctgctggacgcactgcccatggatgcctacacgcatggctgc
atcctgcatcccgagctcaccaccgactccatgatccccaagtacgccacggccgagatc
cgcagacatttagccaatgccaccacggacctcatgaaactggaccatgaagaggagccc
cagctctccgagccctacctttctaaacaaaagaagctcatggccaagatcttggagcat
gatgatgtgagctacctgaagaagatcctcggggaactggccatggtgctggaccagatt
gaggcggagctggagaagaggaagctggagaacgaggggcagaaatgcgagctgtggctc
tgtggctgtgccttcaccctcgctgatgtcctcctgggagccaccctgcaccgcctcaag
ttcctgggactgtccaagaaatactgggaagatggcagccggcccaacctgcagtccttc
tttgagagggtccagagacgctttgccttccggaaagtcctgggtgacatccacaccacc
ctgctgtcggccgtcatccccaatgctttccggctggtcaagaggaaacccccatccttc
ttcggggcgtccttcctcatgggctccctgggtgggatgggctactttgcctactggtac
ctcaagaaaaaatacatctag