GENSCAN 1.0	Date run:  6-Nov-116	Time: 06:25:21

Sequence gi568815578r:36652791_36871194 : 218404 bp : 47.83% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.12 PlyA -     59     54    6                               1.05
 1.11 Term -    911    730  182  0  2   91   47   119 0.905   5.87
 1.10 Intr -   2049   2011   39  1  0   85   82    50 0.656   2.30
 1.09 Intr -   3621   3570   52  0  1   91   79    60 0.991   3.88
 1.08 Intr -   3742   3707   36  1  0  124  110     9 0.913   5.16
 1.07 Intr -  12307  12256   52  0  1  106  103    -4 0.968   1.81
 1.06 Intr -  12511  12446   66  0  0   78  106    44 0.881   3.22
 1.05 Intr -  13602  13499  104  0  2   81   15   133 0.820   4.27
 1.04 Intr -  18607  18551   57  1  0   73  111    26 0.009   2.48
 1.03 Intr -  28112  28026   87  2  0   81  106    48 0.478   6.07
 1.02 Intr -  29788  29728   61  0  1   78   92    41 0.709   2.24
 1.01 Init -  31669  31623   47  1  2   89  100    26 0.848   4.21
 1.00 Prom -  38217  38178   40                              -5.96

 2.04 PlyA -  39073  39068    6                               1.05
 2.03 Term -  41339  41277   63  2  0  108   39    86 0.966   3.59
 2.02 Intr -  54217  54182   36  1  0  110  110    36 0.276   6.46
 2.01 Init -  68945  68889   57  2  0   60   98    49 0.699   4.41
 2.00 Prom -  71637  71598   40                              -3.56

 3.10 PlyA -  71771  71766    6                               1.05
 3.09 Term -  84187  84117   71  2  2  116   55    13 0.009  -1.10
 3.08 Intr -  93419  93255  165  0  0   54  109   181 0.009  16.73
 3.07 Intr - 102060 101973   88  0  1   92  111   134 0.997  15.64
 3.06 Intr - 103039 102892  148  0  1   83  103    98 0.995  11.04
 3.05 Intr - 105371 105297   75  1  0  116   66    15 0.617   0.73
 3.04 Intr - 109758 109671   88  1  1   56   86    36 0.420  -0.77
 3.03 Intr - 118187 118083  105  0  0   53   75    67 0.350   2.09
 3.02 Intr - 118683 118635   49  0  1   57  115     7 0.452  -1.45
 3.01 Init - 121111 120872  240  1  0   45   96   361 0.977  28.47
 3.00 Prom - 129056 129017   40                              -6.96

 4.23 PlyA - 129063 129058    6                              -0.45
 4.22 Term - 130591 130514   78  1  0   94   47    40 0.759  -1.74
 4.21 Intr - 131568 131407  162  0  0  113   94    40 0.645   7.27
 4.20 Intr - 131961 131845  117  0  0  102   23    50 0.287   0.56
 4.19 Intr - 141809 140459 1351  1  1  138   92  1476 0.740 141.39
 4.18 Intr - 144162 144092   71  0  2  120   34   104 0.804   6.18
 4.17 Intr - 144783 144712   72  0  0   83  105   113 0.941  12.10
 4.16 Intr - 150317 150066  252  2  0  115   94   481 0.960  49.03
 4.15 Intr - 152112 151945  168  0  0  103   99   343 0.939  37.04
 4.14 Intr - 153167 153063  105  2  0   48   78   140 0.984   9.41
 4.13 Intr - 155953 155723  231  1  0   82   94   242 0.987  22.17
 4.12 Intr - 157317 157192  126  0  0  121   96   249 0.740  29.88
 4.11 Intr - 160054 159914  141  1  0   39   90   194 0.996  15.25
 4.10 Intr - 163603 162336 1268  2  2   79  110  2162 0.366 204.80
 4.09 Intr - 166817 166690  128  1  2   10   76   116 0.241   2.92
 4.08 Intr - 171257 171163   95  2  2  116   56    35 0.407   1.86
 4.07 Intr - 176422 176264  159  1  0   97   78   321 0.812  32.18
 4.06 Intr - 182476 182429   48  1  0  107   42    41 0.438   0.28
 4.05 Intr - 186651 186427  225  0  0  164   82   528 0.965  57.98
 4.04 Intr - 194349 194319   31  2  1   83  103     5 0.447  -0.37
 4.03 Intr - 197094 196942  153  2  0   86   46    98 0.404   4.59
 4.02 Intr - 202455 202409   47  0  2   77   57    31 0.031  -3.89
 4.01 Init - 210554 209868  687  2  0  110   81   858 0.702  80.38

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  37671  37916  246  2  0   62   43   163 0.810   4.28
S.002 Intr +  80507  80648  142  1  1   79   86    96 0.810   8.43
S.003 Init -  93465  93255  211  0  1   91  109   210 0.921  22.35
S.004 Term - 100107  99998  110  1  2  123   38    33 0.954   0.47


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:36652791_36871194|GENSCAN_predicted_peptide_1|260_aa
MDELAEMLPPVLTHLSLKSIIGIGVGAGAYILSRFALNHPELVEGLVLINVDPCAKGWID
WAASKLSGLTTNVVDIILAHHFGQEELQANLDLIQTYRMHIAQDINQDNLQLFLNSYNGR
RDLEIERPILGQNDNKSKTLKCSTLLVVGDNSPAVEAVMADCGGLPQVVQPGKLTEAFKY
FLQGMGYIPYVQLSHLSTESVPSASMTRLARSRTHSTSSSLGSGESPFSRSVTSNQSDGT
QESCESPDVLDRHQTMEVSC

>gi568815578r:36652791_36871194|GENSCAN_predicted_CDS_1|783_bp
atggatgagctggctgaaatgctgcctcctgttcttacccacctaagcctgaaaagcatc
attggaattggagttggagctggagcttacatcctcagcagatttgcactcaaccatcca
gagcttgtggaaggccttgtgctcattaatgttgacccttgcgctaaaggctggattgac
tgggcagcttccaaactctctggcctgacaaccaatgttgtggacattattttggctcat
cactttgggcaggaagagttacaggccaacctggacctgatccaaacctacagaatgcat
attgcccaagacatcaaccaagacaacctgcagctcttcttgaattcctacaatggacgc
agagacctggagatcgaaagacccatactgggccaaaatgataacaaatcaaaaacatta
aagtgttctactttactggtggtaggggacaattcgcctgcagttgaggctgtgatggcg
gactgtgggggactgccccaggtagttcagcctgggaagctcaccgaggccttcaagtac
tttttgcagggaatgggctacatcccgtatgtgcagctcagtcacctgagcaccgagtca
gtaccatctgccagcatgactcggctcgcccgatcacgaacccactcaacctcgagtagc
ctcggctctggagaaagtcccttcagccggtctgtcaccagcaatcagtcagatggaact
caagaatcctgtgagtcccctgatgtcctggacagacaccagaccatggaggtgtcctgc
taa

>gi568815578r:36652791_36871194|GENSCAN_predicted_peptide_2|51_aa
MDELQDVQLTEIKPLLNDKNGTRNFQDFDCQPTQQDNKDEDLYDDPLPLNE

>gi568815578r:36652791_36871194|GENSCAN_predicted_CDS_2|156_bp
atggatgaacttcaggatgttcagctcacagagatcaaaccacttctaaatgataagaat
ggtacaagaaacttccaggactttgactgtcagcctactcaacaagataacaaggatgaa
gacctttatgatgatccacttccacttaatgaatag

>gi568815578r:36652791_36871194|GENSCAN_predicted_peptide_3|342_aa
MRVGRRCTHVHRRRQAFCARVPEKLTAAHAPLVGGSFGGGDRDVEGGDRFTLIREYRLRV
RKASRSDLGLWRATRGLVFQSLPPRMTSVTRSEIIDEQSASYQDRRQSWRRASMKETNRR
KSLHPIHQGITASSLSEELKHFADGLETDGTLQKCFEDSNGFSLERQTWDQLLLHYQQEA
KEILSRGSTEAKITEVKVEPMTYLGSSQNEVLNTKPDYQKILQNQSKVFDCMELVMDELQ
GSVKQLQAFMDESTQCFQKVSVQLVPEVDGHSTHAPPWRPRRACADRSTSPAPLAAAAAA
AAAAAAAAAAALTAGARASGKYEGCEWPLSRPEDEQGYFLLQ

>gi568815578r:36652791_36871194|GENSCAN_predicted_CDS_3|1029_bp
atgcgcgtcgggcggcggtgtacgcatgtgcatcgccggaggcaggcgttctgcgcgcgc
gtgcccgagaaactgacggccgcgcatgcgcccttggttggcgggagtttcggaggcggt
gaccgtgacgtagaaggtggagaccgcttcaccctgatcagggagtatcggctgcgggtg
cgcaaggcgtccaggagtgacctggggctgtggagagcgacccgtggccttgtgtttcag
agtttaccacctaggatgacttcagtgactagatcagagatcatagatgaacaatctgcc
agttatcaagacaggaggcaatcctggcggcgagcaagtatgaaagaaacgaaccggcgg
aagtcgctgcatcccattcaccagggcatcacagcatcttctctttctgaagaattgaaa
cattttgcagacggactggaaactgatggaactctacaaaaatgttttgaagattcaaat
gggttttctttagaacgtcagacttgggatcagctcttgcttcactaccagcaggaggct
aaagagatattgtccagaggatcaactgaggccaaaattactgaggtcaaagtggaacct
atgacatatcttgggtcttctcagaatgaagttcttaatacaaaacctgactaccagaaa
atattacagaaccagagcaaagtctttgactgtatggagttggtgatggatgaactgcaa
ggatcagtgaaacagctgcaggcctttatggatgaaagtacccagtgcttccagaaggtg
tcagtacagctcgttcccgaggtggacgggcacagcactcatgcgccgccctggcgtcct
cggcgcgcctgcgcggaccgcagcacctcccccgcccctctcgccgccgccgccgccgcc
gccgccgccgccgccgccgccgctgctgctgcactgacggcgggtgcccgcgcctcagga
aaatatgaggggtgtgaatggcccttatctaggcctgaggatgagcaggggtacttcctg
ttacagtga

>gi568815578r:36652791_36871194|GENSCAN_predicted_peptide_4|1904_aa
MEAPAAEPPVRGCGPQPAPAPAPAPERKKSHRAPSPARPKDVAGWSLAKGRRGPGPGSAV
ACSAAFSSRPDKKGRAVAPGARGAGVRVAGVRTGVRAKGRPRSGAGPRPPPPPPSLTDSS
SEVSDCASEEARLLGLELALSSDAESAAGGPAGVRTGQPAQPAPSAQQPPRPPASPDEPS
VAASSVGSSRLPLSASLAFSDLTEEMLDCGPSGLVRELEELRSENDYLKNGDVDVLAPHV
AVRVPGSWCLVTFISSPTAHQLLQANSVIAMHLEPRAKVPVGPKSKLPPAVLSVQTNVFS
TYLTGSDEIEELRAEMLEMRDVYMEEDVYQLQELRQQLDQASKTCRILQYRLRKAERRSL
RAAQTGQVDGELIRGLEQDVKDLQNLGGAFAQHEEGKVSKDISMRLHKELEVVEKKRARL
EEENEELRQRLIETELAKQVLQTELERPREDPVVSSETWKRLPTPVTASFPGTAFSSGIP
TCNSDVYQVENHCAGYTLALIREDTFSPTNSLEFGQELCQELVPAHSAPQNAMAGTETPS
TNLPGLCLSLWSQEDSADLKCQLHFAKEESALMCKKLTKLAKENDSMKEELLKYRSLYGD
LDSALSAEELADAPHSRETELKVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMKDHG
GGCGGPEARLAFSALGGGECGESLAELRRHLQFVEEEAELLRRSSAELEDQNKLLLNELA
KFRSEHELDVALSEDSCSVLSEPSQEELAAAKLQIGELSGKVKKLQYENRVLLSNLQRCD
LASCQSTRPMLETDAEAGDSAQCVPAPLGETHESHAVRLCRAREAEVLPGLREQAALVSK
AIDVLVADANGFTAGLRLCLDNECADFRLHEAPDNSEGPRDTKLIHAILVRLSVLQQELN
AFTRKADAVLGCSVKEQQESFSSLPPLGSQGLSKEILLAKDLGSDFQPPDFRDLPEWEPR
IREAFRTGDLDSKPDPSRSFRPYRAEDNDSYASEIKELQLVLAEAHDSLRGLQEQLSQER
QLRKEEADNFNQKMVQLKEDQQRALLRREFELQSLSLQRRLEQKFWSQEKNMLVQESQQF
KHNFLLLFMKLRWFLKRWRQGKVLPSEGDDFLEVNSMKELYLLMEEEEINAQHSDNKACT
GDSWTQNTPNEYIKTLADMKVTLKELCWLLRDERRGLTELQQQFAKAKATWETERAELKG
HTSQMELKTGKGAGERAGPDWKAALQREREEQQHLLAESYSAVMELTRQLQISERNWSQE
KLQLVERLQGEKQQVEQQVKELQNRLSQLQKAADPWVLKHSELEKQDNSWKETRSEKIHD
KEAVSEVELGGNGLKRTKSVSSMSEFESLLDCSPYLAGGDARGKKLPNNPAFGFVSSEPG
DPEKDTKEKPGLSSRDCNHLGALACQDPPGRQMQRSYTAPDKTGIRVYYSPPVARRLGVP
VVHDKEGKIIIEPGFLFTTAKPKESAEADGLAESSYGRWLCNFSRQRLDGGSAGSPSAAG
PGFPAALHDFEMSGNMSDDMKEITNCVRQAMRSGSLERKVKSTSSQTVGLASVGTQTIRT
VSVGLQTDPPRSSLHGKAWSPRSSSLVSVRSKQISSSLDKVHSRIERPCCSPKYGSPKLQ
RRSVSKLDSSKDRSLWNLHQGKQNGSAWARSTTTRDSPVLRNINDGLSSLFSVVEHSGST
ESVWKLGMSETRAKPEPPKYGIVQEFFRNVCGRAPSPTSSAGEEGTKKPEPLSPASYHQP
EGVARILNKKAAKLGSSEEVRLTMLPQVGKDGVLRDGDGAVVLPNELCCPPFLTSPVSCL
SHWLDFDVAHCSMWGSASHGLALVPAEHQGHASPASRLLHAPVTGVGRAGSQWSCGPVPL
LDAAALTHEVRGALQGYLQSQISPFWNDDFIGMQIKSFWCISGS

>gi568815578r:36652791_36871194|GENSCAN_predicted_CDS_4|5715_bp
atggaggcgccggcggccgagcccccggtccggggctgcggtccccagcccgcgcctgca
cccgcgcctgccccggagaggaaaaagagccaccgcgcgccgtcgccggcccggcccaaa
gacgtggccggctggtcgctggctaagggccgccgcggcccaggcccgggctcagcagtc
gcctgcagcgccgcgttctcctcacggccggacaagaaggggcgcgcagtggctcccggg
gcgcgcggtgcgggtgtgcgggtggccggggtccgcaccggggtccgtgccaagggccgt
ccgcgctcgggtgcggggccgcgaccgccaccgccgccccccagcctcacggatagcagc
tcggaggtgtcggactgcgcgtcggaggaggcgcgcctgctgggcctggagctggcgctg
agcagcgacgccgagtccgcggccgggggcccggcgggggtccgtacggggcagccggcc
cagcccgcgccctccgcgcagcagcccccgcggccgcccgcctccccggacgagccgtcg
gtggccgcgtcgtcggtgggcagcagccgcttgccgctcagcgcctcgcttgccttctcc
gacctcaccgaggagatgctggactgcgggcccagcggcttggtgcgggagctggaggag
ctgcgctcggagaacgactatctcaagaatggggatgtggatgtccttgccccgcacgtt
gccgtgagggttccagggtcctggtgtttggtcactttcatctccagccccacagctcac
cagctgctgcaggccaattccgtcatagccatgcatctggagccacgtgcaaaggttcca
gtgggccccaaatctaaacttccccccgctgtcctcagtgtacaaacgaacgttttcagc
acctacctcacagggtcggacgagattgaggagctgcgggccgagatgctggagatgcgg
gacgtctatatggaggaggacgtgtatcagctgcaggagctgcgacagcagctggaccag
gccagcaagacctgccgcatcctgcagtaccggctgcgcaaagccgagcgccgcagtctc
cgtgccgcccagaccggccaggtggacggcgagcttatccgtggtctggagcaggatgtc
aaggacctacagaacctcggtggggcctttgcccagcatgaggagggcaaggtctctaag
gacatctccatgcggctgcataaggagctcgaggtggtggagaagaaacgggcgcggctg
gaggaggagaacgaagagcttcgtcagcggctcatcgagactgagctggctaagcaggtg
ctgcagacggagctggagcgaccgagagaggaccctgttgtgtcttcagaaacctggaag
aggctgcccactcctgtgactgcttccttccctggcacagccttctcatccggaattcct
acctgtaattctgatgtgtaccaggttgagaaccactgtgctggctacactctggccctc
atcagagaagacacattttctcctaccaactctttggaatttggtcaagagctatgtcaa
gaactggtcccagcacatagtgctccccaaaatgccatggctggtactgagactcccagc
actaaccttcctgggttgtgtctgtctctgtggtcccaggaggacagtgcagacctgaag
tgccagttgcactttgcaaaggaggagtcagccctcatgtgcaagaagctcactaagctt
gccaaggagaatgacagcatgaaggaggagctgctgaagtaccgctcgctctatggggac
ctggacagcgcgctgtcagccgaggagctggccgatgccccccactcgcgggagaccgag
ctgaaggtgcacctgaagctggtggaggaggaagccaacctgctgagccgccgcatcgtg
gagctggaggtggagaaccgaggcctgcgggctgagatggacgacatgaaggatcatgga
ggtggctgtgggggtcctgaggcacgcctggccttctccgcgctgggtggcggagagtgc
ggggagagcttggcagagctgcggcgacacctgcagtttgtcgaagaggaggccgagctg
ctgcggcgctcctctgccgagctcgaggaccagaacaagctgctgctgaacgagctggcc
aagttccgctcggagcacgagctggacgtggcgctgtcggaggacagttgttctgtgctc
agcgaaccttcacaggaggagctggcggccgccaagctgcagatcggcgagctcagcggc
aaggtcaagaagctgcagtacgagaaccgcgtgctcctctccaacctccagcgctgtgac
ctcgcctcctgccagagtacgcggcccatgctggagacggacgccgaggccggggactct
gcccagtgtgtgcctgctcccctgggcgagacacacgagtcccatgcggtccgactctgc
agagccagggaggccgaggtgctgcctgggctgagagagcaggccgccctggtcagtaag
gccatcgatgtcctggtggctgatgccaatggcttcacggctggcctccggctgtgtctg
gacaacgagtgtgctgacttccggctgcatgaggcccccgacaacagcgagggccccagg
gacaccaagctcatccatgccatcctggtgcgcctgagcgtgctgcagcaggagctgaat
gccttcacgcggaaggcagatgcagtcctcgggtgctctgtcaaggaacagcaggagtcc
ttctcatcactgccccccttgggctcccaggggctctctaaggagattcttctggcaaaa
gaccttggctcagactttcagccacctgacttcagggacctgccggaatgggagcccagg
atccgagaggctttccgcactggtgacttggactctaagcccgaccccagccggagcttc
aggccttaccgagctgaagacaatgattcctatgcctctgagatcaaggagctgcagctg
gtgctggctgaggcccacgacagcctccggggcttgcaagagcagctctcccaggagcgg
cagctacgaaaggaggaggccgacaatttcaaccagaaaatggtccagctgaaggaggac
cagcagagggcgctcctgaggcgggagtttgagctgcagagtctgagcctccagcggagg
ctggagcagaaattctggagccaggagaagaacatgctggtgcaggagtcccagcaattc
aagcacaacttcctgctgctcttcatgaagctcaggtggttcctcaagcgctggcggcag
ggcaaggttttgcccagcgaaggggatgacttcctcgaggtgaacagcatgaaggagctg
tacttgctgatggaggaagaggagataaacgctcagcattctgataacaaggcctgcacg
ggggacagctggacccagaacacgcccaatgagtacatcaagacactggccgacatgaag
gtgacgctgaaggagctgtgctggctgctccgggatgaacgccgtggtctgacggagctt
cagcaacagtttgccaaggccaaggctacctgggagacagagcgggcagagctcaagggc
catacctcccagatggagctgaagacagggaagggggccggggagcgggcagggcccgac
tggaaggcagccctacagcgggagcgtgaggagcagcagcacctcctagctgagtcctac
agcgctgtcatggagctgactcggcagctgcagatcagtgagcgcaactggagccaggaa
aagctgcagctggtggagcggctgcagggtgagaagcagcaggtggagcagcaggtgaag
gagctgcagaaccgcctaagccagctgcagaaggctgccgacccctgggtcctgaagcac
tcggagctggagaagcaggacaacagctggaaggagacacgcagtgagaagatccacgac
aaggaggctgtttccgaagttgagcttggaggaaatggtttaaagagaaccaaatctgtt
tcttccatgtctgagtttgaaagtttgctcgactgttccccttaccttgctggcggagat
gcccggggcaagaagctgcctaacaaccctgcctttggctttgtgagctccgagccaggg
gatccagagaaagacaccaaggagaagcctgggctctcgtcgagggactgcaaccacctg
ggtgccctggcctgccaggaccccccagggaggcagatgcagcgcagctacacggctcct
gacaagacgggcatccgagtctactatagtcccccggtggcccggcgcctcggagtccct
gtggttcatgacaaagagggcaagatcattatcgagcccggcttcctcttcaccacagcc
aagcccaaagagtcggccgaggctgatgggctggctgagagctcctatggtcggtggctc
tgcaacttctcacggcagcgcctggacggaggctcagcgggcagcccctcggcggccggg
cctggcttcccagcggccctgcatgactttgagatgtcaggcaacatgagtgatgacatg
aaggagatcaccaactgtgtgcgccaggccatgcgctccggctcactggagaggaaagtg
aagagcacatccagccagacggtgggcctggccagtgtgggcacacagaccatccgcacg
gtcagcgtgggcctgcagaccgacccaccccgcagcagcctccatggcaaggcctggtca
ccccgcagctcttcgctcgtgtctgtgcgcagcaagcagatctcctcctccctggacaag
gtccattcgcgcatcgagcggccctgctgctcccccaagtatggctcaccaaagctccag
aggcggtctgtgtccaagctggacagcagcaaggaccgcagcctgtggaacctgcaccag
ggcaagcagaacggctcggcctgggcccgctccaccaccacgcgggacagccctgtattg
agaaacatcaacgatggactctccagcctcttcagtgtggtggagcactcagggagcacg
gagtctgtctggaaactaggcatgtctgagacgcgggccaagcccgagcctcccaagtac
ggcattgtgcaggaattcttccgtaatgtgtgtggccgggcaccgagccccacctcatca
gcaggagaggagggcaccaagaagccagagcccctctccccagccagctaccatcagcca
gagggtgtggccaggatcctgaacaagaaggcagccaagttgggcagcagtgaggaggtc
agactcaccatgctcccccaggtggggaaggatggtgtcctccgggacggagatggagcc
gtggtccttcccaatgagctctgctgcccgcccttcctcacgtcccctgtgagctgcctg
agccattggttggatttcgatgtggctcattgcagcatgtggggcagcgcctcccatggc
ctcgccttggtgccggctgaacaccagggtcatgccagtcccgccagccgcctcctccat
gccccagtgactggtgtgggcagagcaggcagccagtggagctgtgggccagttccgctc
ttggatgctgctgctctcacccatgaggtcaggggggccctccaaggttatctccagagc
caaatcagccccttttggaatgatgacttcattggaatgcaaatcaagtcattttggtgc
atcagtggctcttag