GENSCAN 1.0	Date run:  8-Nov-116	Time: 13:57:28

Sequence gi568815578f:4624552_4825079 : 200528 bp : 45.10% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -   1218   1167   52  0  1  106   94    88 0.644  12.53
 1.00 Prom -   3356   3317   40                              -6.36

 2.02 PlyA -   3519   3514    6                               1.05
 2.01 Sngl -   5668   5297  372  1  0  100   48   266 0.535  19.93
 2.00 Prom -   6663   6624   40                              -5.96

 3.00 Prom +  14344  14383   40                              -2.36
 3.01 Init +  15549  15613   65  2  2   69   76    45 0.609   2.02
 3.02 Intr +  54640  54693   54  1  0   80   42    78 0.002   0.49
 3.03 Intr +  68519  68632  114  2  0  106   17    80 0.230   2.26
 3.04 Term +  74660  75431  772  2  1  136   55   886 0.627  82.97
 3.05 PlyA +  79253  79258    6                               1.05

 4.04 PlyA -  82889  82884    6                               1.05
 4.03 Term -  88674  88580   95  1  2   60   47    96 0.577   0.69
 4.02 Intr -  89274  89175  100  0  1  110   89    42 0.627   6.18
 4.01 Init -  94744  94658   87  1  0   82   42    34 0.103  -1.15
 4.00 Prom -  99477  99438   40                              -3.56

 5.00 Prom +  99534  99573   40                              -4.56
 5.01 Sngl + 100001 100531  531  1  0   85   43   792 0.940  68.47
 5.02 PlyA + 101083 101088    6                               1.05

 6.18 PlyA - 103026 103021    6                               1.05
 6.17 Term - 111740 111478  263  0  2   49   48   171 0.948   4.89
 6.16 Intr - 124470 124270  201  1  0   66   60    59 0.011   0.16
 6.15 Intr - 151499 151423   77  1  2   34   75    80 0.092   0.46
 6.14 Intr - 152331 152201  131  0  2   53   63    87 0.168   2.19
 6.13 Intr - 157979 157907   73  1  1   77   78    65 0.292   3.81
 6.12 Intr - 161777 161680   98  2  2  126  108    86 0.992  13.21
 6.11 Intr - 163203 163082  122  1  2   77   86   216 0.938  20.51
 6.10 Intr - 163717 163666   52  1  1   59  103    83 0.795   5.38
 6.09 Intr - 165146 165075   72  2  0   77   34   140 0.784   7.10
 6.08 Intr - 166060 165900  161  2  2   80  116   215 0.999  23.21
 6.07 Intr - 168076 167988   89  0  2   98   88    92 0.619   9.81
 6.06 Intr - 171415 171264  152  1  2   82   84   200 0.999  17.96
 6.05 Intr - 173534 173459   76  1  1   93   94    90 0.934   9.62
 6.04 Intr - 176825 176653  173  2  2   67   52     2 0.190  -6.76
 6.03 Intr - 177796 177675  122  2  2   43   40   109 0.305   1.81
 6.02 Intr - 181428 181236  193  0  1   50   49   176 0.526   8.97
 6.01 Init - 182196 182146   51  0  0   71   78    44 0.403   0.86
 6.00 Prom - 182424 182385   40                              -5.96

 7.00 Prom + 184862 184901   40                              -1.26
 7.01 Init + 188981 189203  223  1  1   76   82   106 0.403   7.56
 7.02 Term + 195334 195449  116  2  2   52   40    79 0.044  -1.77
 7.03 PlyA + 195603 195608    6                               1.05

 8.03 PlyA - 197559 197554    6                               1.05
 8.02 Term - 197852 197777   76  1  1   96   39    63 0.052  -0.49
 8.01 Init - 198785 198697   89  2  2   94   56   105 0.952   6.02

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 197852 197778   75  1  0   96   92    68 0.912   6.63


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:4624552_4825079|GENSCAN_predicted_peptide_1|18_aa
MAEKEQLQSAAPSEINAX

>gi568815578f:4624552_4825079|GENSCAN_predicted_CDS_1|54_bp
atggccgaaaaggaacagctccagtctgcagctcccagcgagatcaacgcagnn

>gi568815578f:4624552_4825079|GENSCAN_predicted_peptide_2|123_aa
MARGPKKHLKQVAAPKHWMLDKLTGVFAPHPSTSPHKLRECLPLIIFIRNRLKYALTGEE
VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKMGENFCLICDTKGHFAVHRITPEEAK
YKL

>gi568815578f:4624552_4825079|GENSCAN_predicted_CDS_2|372_bp
atggctcgtggtcccaagaagcatctaaagcaggtagcagctccaaagcattggatgctg
gataaattgactggtgtgtttgctcctcatccatccaccagtccccacaagttgagagag
tgtctccccctcatcattttcataaggaacagacttaagtatgccctgacaggagaggaa
gtaaagaagatttgcatgcagcggttcattaagatcgatggcaaggtccgcactgatata
acctaccctgctggattcatggatgtcatcagcattgacaagatgggagagaatttctgt
ctgatctgtgacaccaagggtcactttgctgtacatcgtattacacctgaggaggccaag
tacaagttgtga

>gi568815578f:4624552_4825079|GENSCAN_predicted_peptide_3|334_aa
MRLESGVNGSVMIRKQISSRARTFYEIEGGSTLQVIQLQEHDPPPVCPISVDGITAISLV
MEVPDPGNSHSSIHSTSRAVIMANLGCWMLVLFVATWSDLGLCKKRPKPGGWNTGGSRYP
GQGSPGGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQGGGTHSQW
NKPSKPKTNMKHMAGAAAAGAVVGGLGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPN
QVYYRPMDEYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVVEQMCITQYE
RESQAYYQRGSSMVLFSSPPVILLISFLIFLIVG

>gi568815578f:4624552_4825079|GENSCAN_predicted_CDS_3|1005_bp
atgaggctagaaagtggggtaaatggaagtgtcatgatcagaaaacagatcagcagccgg
gcacgaacattctacgagatagagggtggtagcacacttcaggtcatccagctgcaagag
catgaccctccaccagtttgtcctatttcagtagatggcatcaccgccatctccctggtt
atggaagtcccagacccgggcaactctcactcctccatccactcaaccagcagagcagtc
attatggcgaaccttggctgctggatgctggttctctttgtggccacatggagtgacctg
ggcctctgcaagaagcgcccgaagcctggaggatggaacactgggggcagccgatacccg
gggcagggcagccctggaggcaaccgctacccacctcagggcggtggtggctgggggcag
cctcatggtggtggctgggggcagcctcatggtggtggctgggggcagccccatggtggt
ggctggggacagcctcatggtggtggctggggtcaaggaggtggcacccacagtcagtgg
aacaagccgagtaagccaaaaaccaacatgaagcacatggctggtgctgcagcagctggg
gcagtggtggggggccttggcggctacatgctgggaagtgccatgagcaggcccatcata
catttcggcagtgactatgaggaccgttactatcgtgaaaacatgcaccgttaccccaac
caagtgtactacaggcccatggatgagtacagcaaccagaacaactttgtgcacgactgc
gtcaatatcacaatcaagcagcacacggtcaccacaaccaccaagggggagaacttcacc
gagaccgacgttaagatgatggagcgcgtggttgagcagatgtgtatcacccagtacgag
agggaatctcaggcctattaccagagaggatcgagcatggtcctcttctcctctccacct
gtgatcctcctgatctctttcctcatcttcctgatagtgggatga

>gi568815578f:4624552_4825079|GENSCAN_predicted_peptide_4|93_aa
MAIYEPQSGFSPDTQSAGTLILDLPASRTLPHGNITDFPTGHEPMPLFHLLCSPDSNCKC
YAGTRMKLEGIILTKLTREQKTKHRMFSLTSGS

>gi568815578f:4624552_4825079|GENSCAN_predicted_CDS_4|282_bp
atggccatctatgaaccacaaagtgggttctcaccagacacccaatctgctggcaccttg
atcttggacttgccagcctccagaacactgccacatggaaacattactgattttccaact
ggacatgaaccaatgcctctcttccatcttctctgctctcccgactccaactgcaagtgc
tacgcagggacacgaatgaagctggaaggcatcatcctcaccaaactaacacgggaacag
aaaaccaaacaccgcatgttctcactcacaagtgggagttga

>gi568815578f:4624552_4825079|GENSCAN_predicted_peptide_5|176_aa
MRKHLSWWWLATVCMLLFSHLSAVQTRGIKHRIKWNRKALPSTAQITEAQVAENRPGAFI
KQGRKLDIDFGAEGNRYYEANYWQFPDGIHYNGCSEANVTKEAFVTGCINATQAANQGEF
QKPDNKLHQQVLWRLVQELCSLKHCEFWLERGAGLRVTMHQPVLLCLLALIWLTVK

>gi568815578f:4624552_4825079|GENSCAN_predicted_CDS_5|531_bp
atgaggaagcacctgagctggtggtggctggccactgtctgcatgctgctcttcagccac
ctctctgcggtccagacgaggggcatcaagcacagaatcaagtggaaccggaaggccctg
cccagcactgcccagatcactgaggcccaggtggctgagaaccgcccgggagccttcatc
aagcaaggccgcaagctcgacattgacttcggagccgagggcaacaggtactacgaggcc
aactactggcagttccccgatggcatccactacaacggctgctctgaggctaatgtgacc
aaggaggcatttgtcaccggctgcatcaatgccacccaggcggcgaaccagggggagttc
cagaagccagacaacaagctccaccagcaggtgctctggcggctggtccaggagctctgc
tccctcaagcattgcgagttttggttggagaggggcgcaggacttcgggtcaccatgcac
cagccagtgctcctctgccttctggctttgatctggctcacggtgaaataa

>gi568815578f:4624552_4825079|GENSCAN_predicted_peptide_6|701_aa
MDRLQWLTVIPALWEAEACCTSGYLHWKFPWVCLKLSPGPHFSNCEGGTSAYVAVLASSL
CVTRTLPVTPRFIRQHTLSPKVLVIITGVVLLASSEQNPEMLLNTCNAQDSPTTKNSPRP
GARGGLISHPWNQCGCQCALWLGHLCLDCPRVVVFPLDVCSQRLWQAEAAASSVAPHSLG
NELLLHLKTYNLYYEGQNLQLRHREEEDEFIVEGLLNISWGLRRPIRLQMQDDNERIRPP
PSSSSWHSGCNLGAQGTTLKPLTVPKVQISEVDAPPEGDQMPSSTDSRGLKPLQEDTPQL
MRTRSDVGVRRRGNVRTPSDQRRIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRINSTMT
TPQIENSAEEFALYVVHTSGEKQKLKATDYPLIARILQGPCEQISKVFLMEKDQVEEVTY
DVAQYIKFEMPVLKSFIQKLQEEEDREVKKLMRKDSSTSPVGHGVEAQKGFCKLHRTGSL
SPSKLPLMPPTLTCRAIYGVNSTESGVSYNILPWDNPGVLRSSPVMRFFRYTRQEHRDTE
SPLSLRQGREDKTRSQSFLQLARTMPWTALRHAENNGALESLGPASSGQSSSSPDVFAEV
TLLSWKGVGSCALGEKCILIDENDSNIGTETKKNCHENENIGNGLLHQALSVFLLNTKMS
YSDSRDQMLKLPFEPVSPILGCSHPLSNPDKLERNDVIDIS

>gi568815578f:4624552_4825079|GENSCAN_predicted_CDS_6|2106_bp
atggaccggctgcagtggctcactgtaatcccagcactttgggaggctgaggcctgctgt
acttctggttatctgcactggaagtttccatgggtctgcctgaaactcagtcctggtcct
cacttcagcaactgtgaaggtggcacctctgcctacgttgcggtcctcgccagcagcctg
tgcgtcaccaggactctgcctgtcaccccacgtttcatccggcagcacaccctttcccca
aaggttttggtcatcatcactggggtagtgctgctggcatctagtgagcagaatccagag
atgctgctaaacacctgcaatgcacaagacagtcccacgacaaagaacagtccaaggcca
ggggcgagaggaggactcatcagtcatccttggaaccaatgtggctgtcagtgtgctctg
tggctggggcatttgtgcttggattgtccaagggttgtcgtctttcctttggatgtttgt
tctcagaggctgtggcaagccgaggcagcagccagcagtgttgcccctcacagccttgga
aatgaacttctcttgcatctgaagacctacaacttgtactatgaaggccagaatttacag
ctccggcaccgggaggaagaagacgagttcattgtggaggggctcctgaacatctcctgg
ggcctgcgccggcccattcgcctgcagatgcaggatgacaacgaacgcattcgaccccct
ccatcctcctcctcctggcactctggctgtaacctgggggctcagggaaccactctgaag
cccctgactgtgcccaaagttcagatctcagaggtggatgccccgccggagggtgaccag
atgccaagctccacagactccaggggcctgaagcccctgcaggaggacaccccacagctg
atgcgcacacgcagtgatgttggggtgcgtcgccgtggcaatgtgaggacgcctagtgac
cagcggcgaatcagacgccaccgcttctccatcaacggccatttctacaaccataagaca
tccgtgttcacaccagcctatggctctgtcaccaacgtccgcatcaacagcaccatgacc
accccacagattgagaattcagcagaggagtttgccttgtacgtggtccatacgagtggt
gagaaacagaagctgaaggccaccgattacccgctgattgcccgaatcctccagggccca
tgtgagcagatctccaaagtgttcctaatggagaaggaccaggtggaggaagtcacctac
gacgtggcccagtatataaagttcgagatgccggtacttaaaagcttcattcagaagctc
caggaggaagaagatcgggaagtaaagaagctgatgcgcaaggacagcagcaccagccct
gtggggcatggagtggaagcccagaagggcttctgcaagctgcacagaactgggtcacta
agcccctctaagctgcccttgatgccacctaccctcacctgcagagccatctatggggtc
aacagcaccgagagtggggtatcttacaacatccttccctgggacaacccaggggttctg
agaagctcacccgtgatgcgatttttccggtacacaaggcaagaacaccgggatacagaa
agccctctgtccttgcgacaaggaagagaggacaaaacccggagccaaagcttccttcag
ctggcccgcaccatgccctggacagctctgagacatgcagagaacaatggagccctggag
agcctggggccggcttcctctggacaatcttcatcctcacctgatgtttttgctgaagtc
actttgctctcatggaaaggtgttggcagttgtgccttgggggagaagtgtattcttatt
gatgaaaatgacagtaatattggaactgagaccaagaagaattgtcacgagaatgaaaac
attgggaatggattattgcatcaagctcttagtgtcttcttactcaacaccaaaatgagc
tacagtgacagcagagatcagatgctgaaattacctttcgagccagtttcaccaatactt
ggttgtagtcatccattaagtaatccagacaagcttgagagaaatgatgtcattgacata
agttga

>gi568815578f:4624552_4825079|GENSCAN_predicted_peptide_7|112_aa
MASQTGGAATCLQGSPTGIHKCLTFRMDVAEGNSERLATNQRGRALERDEKGSIKEAQTP
EKSSCVCVGVSIAPGMDERVPLWFCHSCLEQQQFPSPKLSPQTAASTCDDRL

>gi568815578f:4624552_4825079|GENSCAN_predicted_CDS_7|339_bp
atggcctcgcagaccggaggagcagccacatgtttacagggaagccccactggcatccac
aagtgcctgacctttaggatggatgttgcagaaggaaattcagagcgcttagccactaat
cagagaggcagggcgctggagcgggacgaaaaaggaagcataaaggaagcacagactcca
gaaaaaagcagctgtgtgtgcgtgggtgtgagcatagctcccggaatggatgagagggtc
cctctctggttctgccacagctgccttgagcagcagcagttccccagccccaagctgtca
ccgcaaacagcagcatcaacctgtgatgacagactttag

>gi568815578f:4624552_4825079|GENSCAN_predicted_peptide_8|54_aa
MQLARGEGKARGAGRGALGARHWRGMPGARYLESRRLERVFRESKGCVYGSLGI

>gi568815578f:4624552_4825079|GENSCAN_predicted_CDS_8|165_bp
atgcagctggcccggggtgaaggcaaggcgcggggcgcggggcgcggggcactgggagcg
aggcactggcgcgggatgcccggcgcaaggtatctggaatcccggcgcctagaacgtgtt
tttcgggagagcaaaggctgtgtctacggcagcctggggatatag