GENSCAN 1.0	Date run:  5-Nov-116	Time: 22:35:00

Sequence gi568815578r:338589_562405 : 223817 bp : 46.29% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  11050  11244  195  0  0   94  116   201 0.633  23.11
 1.02 Term +  14622  15047  426  2  0  131   49   473 0.999  43.00
 1.03 PlyA +  15985  15990    6                               1.05

 2.06 PlyA -  16775  16770    6                               1.05
 2.05 Term -  18827  18722  106  1  1   47   54   119 0.122   2.28
 2.04 Intr -  27152  27052  101  2  2   63   78    44 0.024  -0.19
 2.03 Intr -  30136  30040   97  0  1   70   37    94 0.039   2.51
 2.02 Intr -  30468  30372   97  1  1   42   80    86 0.569   2.27
 2.01 Init -  31711  31660   52  1  1  108   89   -28 0.405   0.63
 2.00 Prom -  37901  37862   40                              -2.16

 3.00 Prom +  41686  41725   40                              -2.16
 3.01 Init +  43068  43070    3  2  0   67   81     0 0.095  -2.80
 3.02 Intr +  49423  49713  291  0  0   95  102   213 0.476  20.73
 3.03 Intr +  52699  52991  293  0  2  104  105   391 0.978  38.33
 3.04 Term +  57610  58102  493  1  1  106   48   566 0.998  48.48
 3.05 PlyA +  58949  58954    6                               1.05

 4.00 Prom +  65202  65241   40                              -7.06
 4.01 Init +  69003  69083   81  2  0   45   82    91 0.464   5.17
 4.02 Intr +  69414  69628  215  2  2   85   35    17 0.131  -6.39
 4.03 Intr +  70103  70191   89  2  2   98   86    35 0.464   3.91
 4.04 Intr +  71242  71437  196  2  1   63   94   164 0.761  12.97
 4.05 Intr +  78938  79031   94  2  1  101  101   122 0.988  14.77
 4.06 Intr +  79144  79342  199  0  1  122  100   295 0.999  33.02
 4.07 Intr +  80759  80880  122  0  2  103  119    89 0.999  13.71
 4.08 Intr +  80970  81143  174  2  0   84   80   236 0.918  22.54
 4.09 Intr +  82283  82443  161  1  2   64   80   285 0.964  24.09
 4.10 Intr +  83539  83650  112  1  1  141   91   203 0.987  26.28
 4.11 Intr +  88725  88904  180  2  0   18   81   172 0.933   9.56
 4.12 Intr +  89903  90001   99  1  0   66  100   181 0.948  17.41
 4.13 Intr +  90363  90506  144  2  0   70   84   286 0.894  26.88
 4.14 Intr +  91762  91797   36  0  0  109   61    42 0.515   2.06
 4.15 Term +  96441  96575  135  2  0   15   48   111 0.327  -2.18
 4.16 PlyA +  96591  96596    6                              -0.45

 5.23 PlyA -  96910  96905    6                               1.05
 5.22 Term - 100253  99998  256  1  1  132   48   240 0.990  19.46
 5.21 Intr - 100707 100520  188  0  2   94   83   132 0.917  11.79
 5.20 Intr - 101801 101660  142  1  1  135   66    66 0.901   9.46
 5.19 Intr - 103101 103000  102  2  0   97   73   112 0.980   9.89
 5.18 Intr - 103455 103269  187  1  1   90   81   227 0.927  20.95
 5.17 Intr - 106542 106462   81  1  0   83   85    94 0.990   8.21
 5.16 Intr - 109486 109301  186  2  0  114  110   233 0.998  27.76
 5.15 Intr - 113120 113068   53  1  2   30   37    36 0.002  -8.75
 5.14 Intr - 123386 123266  121  0  1   71   50   159 0.051   9.95
 5.13 Intr - 123963 123748  216  1  0  -25   96   214 0.019   9.38
 5.12 Intr - 147874 147788   87  2  0   85   82    86 0.971   7.64
 5.11 Intr - 148987 148839  149  0  2   95   65   175 0.998  15.78
 5.10 Intr - 150190 150090  101  1  2   46  111    93 0.999   6.31
 5.09 Intr - 151293 151192  102  0  0   53   90    45 0.737   1.57
 5.08 Intr - 153776 153666  111  2  0   75  110    78 0.998   9.28
 5.07 Intr - 157214 157131   84  2  0  126   98    37 0.996   8.52
 5.06 Intr - 159192 159133   60  0  0   57  115    99 0.995   8.43
 5.05 Intr - 160717 160667   51  1  0   87   70    34 0.586   0.60
 5.04 Intr - 161346 161245  102  0  0  103   89    74 0.959   9.37
 5.03 Intr - 166641 166530  112  2  1  115  113   129 0.999  18.48
 5.02 Intr - 204367 204342   26  1  2   93   64    14 0.035  -3.68
 5.01 Init - 205302 205084  219  0  0  101   82   212 0.958  18.53

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 220848 220747  102  1  0   54   30   143 0.827   5.25


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:338589_562405|GENSCAN_predicted_peptide_1|206_aa
GSMMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWP
SLCWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRAADYNQALGTCRLA
GTALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNAS
GQSWFSPPASPFGQSSVQTIQPKRDS

>gi568815578r:338589_562405|GENSCAN_predicted_CDS_1|621_bp
gggtccatgatgccgagctgcaatcgttcctgcagctgcagccgcggccccagcgtggag
gatggcaagtggtatggggtccgctcctacctgcacctcttctatgaggactgtgcaggc
actgctctcagcgacgaccctgagggacctccggtcctgtgcccccgccggccctggccc
tcactgtgttggaagatcagcctgtcctcggggaccctgcttctgctgctgggtgtggcg
gctctgaccactggctatgcagtgccccccaagctggagggcatcggtgagggtgagttc
ctggtgttggatcagcgggcagccgactacaaccaggccctgggcacctgtcgcctggca
ggcacagcgctctgtgtggcagctggagttctgctcgccatctgcctcttctgggccatg
ataggctggctgagccaggacaccaaggcagagcccttggaccccgaagccgacagccac
gtggaggtcttcggggatgagccagagcagcagttgtcacccattttccgcaatgccagt
ggccagtcatggttctcgccacccgccagcccctttgggcaatcttctgtgcagactatc
cagcccaagagggactcctga

>gi568815578r:338589_562405|GENSCAN_predicted_peptide_2|150_aa
MVKPHLYKKVQQLARHGGGANRIADGLDVEFEGKGGVKVLPRFLGLNGDRNGRSREPEKE
ENQQRVEAWPPSEKKYIKEQGVPQRQMWKGSSLTVGTTQAALVGNECPISEVNQGRLLRE
GLAEKVMFEQRLEGTAHVVNWGGVPQQREQ

>gi568815578r:338589_562405|GENSCAN_predicted_CDS_2|453_bp
atggtgaaacctcatctctacaaaaaagtacaacaactagccaggcatggtggtggagcc
aacaggattgctgatggtctagatgtggagtttgagggaaaaggaggtgtcaaggtgctt
ccaaggtttcttggcctgaacggtgacaggaatgggagaagcagggagcctgagaaggag
gaaaaccagcagagagtggaggcctggccaccaagtgaaaagaagtacatcaaagagcag
ggagtgccacaaaggcagatgtggaaggggagctctctcacagttggcaccacccaggct
gccctggtgggcaatgagtgtcccatctctgaggtgaaccaggggaggctgctcagggaa
ggccttgctgagaaggtgatgtttgagcaacgacttgaaggaactgcccatgtcgtcaac
tggggaggagtaccccagcagagggaacagtga

>gi568815578r:338589_562405|GENSCAN_predicted_peptide_3|359_aa
MMRATPLAAPAGSLSRKKRLELDDNLDTERPVQKRARSGPQPRLPPCLLPLSPPTAPDRA
TAVATASRLGPYVLLEPEEGGRAYQALHCPTGTEYTCKVYPVQEALAVLEPYARLPPHKH
VARPTEVLAGTQLLYAFFTRTHGDMHSLVRSRHRIPEPEAAVLFRQMATALAHCHQHGLV
LRDLKLCRFVFADRERKKLVLENLEDSCVLTGPDDSLWDKHACPAYVGPEILSSRASYSG
KAADVWSLGVALFTMLAGHYPFQDSEPVLLFGKIRRGAYALPAGLSAPARCLVRCLLRRE
PAERLTATGILLHPWLRQDPMPLAPTRSHLWEAAQVVPDGLGLDEAREEEGDREVVLYG

>gi568815578r:338589_562405|GENSCAN_predicted_CDS_3|1080_bp
atgatgcgagccacccctctggctgctcctgcgggttccctgtccaggaagaagcggttg
gagttggatgacaacttagataccgagcgtcccgtccagaaacgagctcgaagtgggccc
cagcccagactgcccccctgcctgttgcccctgagcccacctactgctccagatcgtgca
actgctgtggccactgcctcccgtcttgggccctatgtcctcctggagcccgaggagggc
gggcgggcctaccaggccctgcactgccctacaggcactgagtatacctgcaaggtgtac
cccgtccaggaagccctggccgtgctggagccctatgcgcggctgcccccgcacaagcat
gtggctcggcccactgaggtcctggctggtacccagctcctctacgcctttttcactcgg
acccatggggacatgcacagcctggtgcgaagccgccaccgtatccctgagcctgaggct
gccgtgctcttccgccagatggccaccgccctggcgcactgtcaccagcacggtctggtc
ctgcgtgatctcaagctgtgtcgctttgtcttcgctgaccgtgagaggaagaagctggtg
ctggagaacctggaggactcctgcgtgctgactgggccagatgattccctgtgggacaag
cacgcgtgcccagcctacgtgggacctgagatactcagctcacgggcctcatactcgggc
aaggcagccgatgtctggagcctgggcgtggcgctcttcaccatgctggccggccactac
cccttccaggactcggagcctgtcctgctcttcggcaagatccgccgcggggcctacgcc
ttgcctgcaggcctctcggcccctgcccgctgtctggttcgctgcctccttcgtcgggag
ccagctgaacggctcacagccacaggcatcctcctgcacccctggctgcgacaggacccg
atgcccttagccccaacccgatcccatctctgggaggctgcccaggtggtccctgatgga
ctggggctggacgaagccagggaagaggagggagacagagaagtggttctgtatggctag

>gi568815578r:338589_562405|GENSCAN_predicted_peptide_4|678_aa
MRQTNANFTNSSTKRQTVTAERQRRIWPPAPPAPPPAPPRPRPPRLRPSSFPRLCDAARR
VTRAGVRGPAISPGGRGGVAPNRSAGTAGTPHSASAAAGRPGGSISQEARSPPGGWAQPR
QMDEKTKKAPENKPCANWLLLYWLSAEEMALSLTRAVAGGDEQVAMKCAIWLAEQRVPLS
VQLKPEVSPTQDIRLWVSVEDAQMHTVTIWLTVRPDMTVASLKDMVFLDYGFPPVLQQWV
IGQRLARDQETLHSHGVRQNGDSAYLYLLSARNTSLNPQELQRERQLRMLEDLGFKDLTL
QPRGPLEPGPPKPGVPQEPGRGQPDAVPEPPPVGWQCPGCTFINKPTRPGCEMCCRARPE
AYQVPASYQPDEEERARLAGEEEALRQYQQRKQQQQEGNYLQHVQLDQRSLVLNTEPAEC
PVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPFIDNTYSCSGKLLEREIK
ALLTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLC
KAIHEQMNCKEYQEDLALRAQNDVAARQTTEMLKVMLQQGEAMRCPQCQIVVQKKDGCDW
IRCTVCHTEICWVTKGPRWGPGGPGDTSGGCRCRKGHVEKRHIKLWLGSKTKCQLLGSPD
QGVKHTKSTPDPHQLCRL

>gi568815578r:338589_562405|GENSCAN_predicted_CDS_4|2037_bp
atgaggcagacgaatgcaaacttcaccaatagctcaacgaaaagacagacggtgaccgct
gagaggcagcgtcggatctggcccccggcccccccggccccgcccccggccccgccccgg
ccccgcccaccccgcctgcggcccagctccttcccgcggctctgcgatgcggcccgcagg
gtgacccgggcgggagtccggggacccgcgatcagccccggaggacggggtggggtcgcc
ccaaacaggagcgccgggaccgctgggaccccgcactcggcgtccgccgccgccgggcga
cccggaggtagcatttcccaggaggcacggtcccccccagggggatgggcacagccacgc
cagatggacgagaagaccaagaaagctcctgaaaataaaccctgtgctaactggctcctg
ctgtactggctttcagcagaggaaatggccctgagcctcacccgagcagtggcgggcggg
gatgaacaggtggcaatgaagtgtgccatctggctggcagagcaacgggtgcccctgagt
gtgcaactgaagcctgaggtctccccaacgcaggacatcaggctgtgggtgagcgtggag
gatgctcagatgcacaccgtcaccatctggctcacagtgcgccctgatatgacagtggcg
tctctcaaggacatggtttttctggactatggcttcccaccagtcttgcagcagtgggtg
attgggcagcggctggcacgagaccaggagaccctgcactcccatggggtgcggcagaat
ggggacagtgcctacctctatctgctgtcagcccgcaacacctccctcaaccctcaggag
ctgcagcgggagcggcagctgcggatgctggaagatctgggcttcaaggacctcacgctg
cagccgcggggccctctggagccaggccccccaaagcccggggtcccccaggaacccgga
cgggggcagccagatgcagtgcctgagcccccaccggtgggctggcagtgccccgggtgc
accttcatcaacaagcccacgcggcctggctgtgagatgtgctgccgggcgcgccccgag
gcctaccaggtccccgcctcataccagcccgacgaggaggagcgagcgcgcctggcgggc
gaggaggaggcgctgcgtcagtaccagcagcggaagcagcagcagcaggaggggaactac
ctgcagcacgtccagctggaccagaggagcctggtgctgaacacggagcccgccgagtgc
cccgtgtgctactcggtgctggcgcccggcgaggccgtggtgctgcgtgagtgtctgcac
accttctgcagggagtgcctgcagggcaccatccgcaacagccaggaggcggaggtctcc
tgccccttcattgacaacacctactcgtgctcgggcaagctgctggagagggagatcaag
gcgctcctgacccctgaggattaccagcgatttctagacctgggcatctccattgctgaa
aaccgcagtgccttcagctaccattgcaagaccccagattgcaagggatggtgcttcttt
gaggatgatgtcaatgagttcacctgccctgtgtgtttccacgtcaactgcctgctctgc
aaggccatccatgagcagatgaactgcaaggagtatcaggaggacctggccctgcgggct
cagaacgatgtggctgcccggcagacgacagagatgctgaaggtgatgctgcagcagggc
gaggccatgcgctgcccccagtgccagatcgtggtacagaagaaggacggctgcgactgg
atccgctgcaccgtctgccacaccgagatctgctgggtcaccaagggcccacgctggggc
cctgggggcccaggagacaccagcgggggctgccgctgcaggaaagggcatgtggagaag
cggcacatcaagctctggttaggatccaaaaccaaatgccagctcctaggatccccagac
cagggtgtgaaacacaccaagagcaccccagacccgcaccagttgtgtcgactgtga

>gi568815578r:338589_562405|GENSCAN_predicted_peptide_5|911_aa
MAAFREIPLGAESEAVSPRLLVGGGFRFRQQRLQPRSGPCGWRPSRVSPPPSPPYCLCEQ
RGERPPPLPLPPQCWNIARLSRNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP
VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD
IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV
ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE
DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR
LTAREAMEHPYFYTVVKDQARMGSSSMPGGSTPVSSANMMSAGRLRACAPLADGGEPADA
ERVLRPAVGAASSPGSATSRGSGGGPGPRGMALRSAQGDGPTSGHWDGGAEKAGSRSRLP
EGYQLSRTAFTVAGLIDALPAYRRCNYHTVLPLRMGFAGKGRRYLEAIGDKNFNAKRKKK
VAEIHQALNSDPTDVAALRRMAISEGGLLTDEIRRKVWPKLLNVNANDPPPISGKNLRQM
SKDYQQVLLDVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVT
FLLVVGERLATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQSAEV
GTIFALSWLITWFGHVLSDFRHVVRLYDFFLACHPLMPIYFAAVIVLYREQEVLDCDCDM
ASVHHLLSQIPQDLPYETLISRAGDLFVQFPPSELAREAAAQQQAERTAASTFKDFELAS
AQQRPDMVLRQRFRGLLRPEDRTKDVLTKPRTNRFVKLAVMGLTVALGAAALAVVKSALE
WAPKFQLQLFP

>gi568815578r:338589_562405|GENSCAN_predicted_CDS_5|2736_bp
atggccgcattcagagagattcctctgggggcggagtcggaagctgtctcgccccgcctc
ctggtaggagggggtttccgcttccggcagcagcggctgcagcctcgctctggtccctgc
ggctggcggccgagccgtgtgtctcctcctccatcgccgccatattgtctgtgtgagcag
aggggagagcggccgccgccgctgccgcttccaccacagtgttggaacattgctagatta
agcagaaatcaagatgactaccagctggttcgaaaattaggccgaggtaaatacagtgaa
gtatttgaagccatcaacatcacaaataatgaaaaagttgttgttaaaattctcaagcca
gtaaaaaagaagaaaattaagcgtgaaataaagattttggagaatttgagaggaggtccc
aacatcatcacactggcagacattgtaaaagaccctgtgtcacgaacccccgccttggtt
tttgaacacgtaaacaacacagacttcaagcaattgtaccagacgttaacagactatgat
attcgattttacatgtatgagattctgaaggccctggattattgtcacagcatgggaatt
atgcacagagatgtcaagccccataatgtcatgattgatcatgagcacagaaagctacga
ctaatagactggggtttggctgagttttatcatcctggccaagaatataatgtccgagtt
gcttcccgatacttcaaaggtcctgagctacttgtagactatcagatgtacgattatagt
ttggatatgtggagtttgggttgtatgctggcaagtatgatctttcggaaggagccattt
ttccatggacatgacaattatgatcagttggtgaggatagccaaggttctggggacagaa
gatttatatgactatattgacaaatacaacattgaattagatccacgtttcaatgatatc
ttgggcagacactctcgaaagcgatgggaacgctttgtccacagtgaaaatcagcacctt
gtcagccctgaggccttggatttcctggacaaactgctgcgatatgaccaccagtcacgg
cttactgcaagagaggcaatggagcacccctatttctacactgttgtgaaggaccaggct
cgaatgggttcatctagcatgccagggggcagtacgcccgtcagcagcgccaatatgatg
tcagcggggcgcctgcgcgcctgcgcgccgctggccgacggaggggagcctgccgatgcc
gagcgggtgctacgtcccgcggtcggagccgcgtcttctcccggctccgccaccagccgg
ggctcgggtgggggcccggggccccggggcatggccctccggagtgcgcagggcgacggc
cccacctccggccactgggacggcggcgcggagaaggcaggctcccggagccgcctcccc
gaggggtatcagctctcccgaactgcattcaccgtcgccggcttgattgacgcgctgccc
gcgtaccgccgatgtaattaccacacagttcttcctttaagaatgggctttgcaggaaaa
ggaagaaggtatctggaagcaataggagacaaaaactttaacgccaaaaggaaaaagaaa
gtggcagagatacaccaggctctgaacagtgatcccactgatgtggctgcccttagacgc
atggctatcagtgaaggagggctcctgactgatgagatcagacgaaaagtgtggcccaag
ctcctcaatgtcaatgccaatgacccacctcctatatcagggaagaacctacggcagatg
agcaaggactaccaacaagtgttgctggacgtccggcggtcattgcggcggttccctcct
ggcatgccagaggaacagagagaagggctccaggaagaactgattgacatcatcctcctc
atcttggagcgcaaccctcagctgcactactaccagggctaccatgacattgtggtcaca
tttctgctggtggtaggcgagaggctggcaacatccctggtagaaaaattatctacccac
cacctcagggattttatggatccaacaatggacaacaccaagcatatattaaactatctg
atgcccatcattgaccaggtgaatccagagctccatgacttcatgcagagtgctgaggta
gggaccatctttgccctcagctggctcatcacctggtttgggcatgtcctgtctgacttc
aggcacgtcgtgcggttatatgacttcttcctggcctgccacccactgatgccgatttac
tttgcagccgtgattgtgttgtatcgcgagcaggaagtcctggactgtgactgtgacatg
gcctcggtccaccacctgttgtcccagatccctcaggacttgccctatgagacactgatc
agcagagcaggagacctttttgttcagtttcccccatccgaacttgctcgggaggccgct
gcccaacagcaagctgagaggacggcagcctctactttcaaagactttgagctggcatca
gcccagcagaggcctgatatggtgctgcggcagcggtttcggggacttctgcggcctgaa
gatcgaacaaaagatgtcctgaccaagccaaggaccaaccgctttgtgaaattggcagtg
atggggctgacagtggcacttggagcggctgcactggctgtggtgaaaagtgccctggaa
tgggcccctaagtttcagctgcagctgtttccctga