GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:08:47

Sequence gi568815579r:38925414_39132227 : 206814 bp : 48.80% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -    887    792   96  2  0   86   93   120 0.462  12.51
 1.01 Init -   5311   5057  255  1  0   85   78   414 0.807  35.33
 1.00 Prom -   6146   6107   40                              -9.26

 2.00 Prom +   6885   6924   40                             -10.25
 2.01 Sngl +   6958   7287  330  0  0   65   49   567 0.507  46.52
 2.02 PlyA +   7577   7582    6                               1.05

 3.07 PlyA -   8269   8264    6                               1.05
 3.06 Term -  15195  14806  390  0  0   28   43   180 0.704   2.49
 3.05 Intr -  17338  17270   69  1  0  161   86   183 0.700  24.78
 3.04 Intr -  19691  19556  136  1  1   28   94   162 0.997  11.37
 3.03 Intr -  21154  21059   96  0  0  113  105   179 0.999  21.22
 3.02 Intr -  23265  23154  112  1  1   90   72    54 0.967   3.44
 3.01 Init -  24906  24558  349  0  1   71   25   644 0.936  51.75
 3.00 Prom -  34770  34731   40                              -3.46

 4.00 Prom +  60255  60294   40                              -3.16
 4.01 Init +  62783  62858   76  1  1  101   96    28 0.852   4.70
 4.02 Intr +  66037  66107   71  2  2  122   72    36 0.590   4.30
 4.03 Term +  94810  94929  120  0  0   41   45   115 0.250   0.97
 4.04 PlyA +  95238  95243    6                               1.05

 5.06 PlyA -  96123  96118    6                               1.05
 5.05 Term - 100141  99998  144  1  0   89   37   163 0.937   9.21
 5.04 Intr - 101592 101457  136  2  1  133   94   141 0.999  19.77
 5.03 Intr - 105711 105616   96  2  0   93  105    69 0.997   8.22
 5.02 Intr - 105907 105796  112  2  1   69   68    67 0.620   2.24
 5.01 Init - 106814 106451  364  2  1  103   81   536 0.623  49.61
 5.00 Prom - 110414 110375   40                              -2.86

 6.04 PlyA - 111599 111594    6                               1.05
 6.03 Term - 127185 127105   81  0  0  109   48    82 0.654   3.99
 6.02 Intr - 128004 127961   44  1  2   66   75    36 0.077  -1.94
 6.01 Init - 132807 132462  346  0  1   73   64   264 0.388  19.98
 6.00 Prom - 134113 134074   40                              -7.16

 7.00 Prom + 135060 135099   40                              -3.76
 7.01 Init + 140713 140777   65  0  2   67   70    56 0.369   2.32
 7.02 Intr + 145498 145640  143  1  2   69   89    84 0.510   6.60
 7.03 Intr + 159739 159977  239  2  2  109  111    20 0.101   3.73
 7.04 Intr + 171179 171363  185  1  2   87   62    13 0.019  -2.81
 7.05 Intr + 171651 171772  122  0  2   80   43    50 0.052  -0.16
 7.06 Intr + 173045 173245  201  0  0  129   81   155 0.968  18.16
 7.07 Intr + 173547 173729  183  1  0   97   68   224 0.997  21.06
 7.08 Intr + 174814 174937  124  2  1  123   47   171 0.999  16.14
 7.09 Intr + 175167 175229   63  0  0   94   95    75 0.963   6.63
 7.10 Intr + 175326 175440  115  0  1  105   91    89 0.999  11.35
 7.11 Intr + 175536 175643  108  2  0  103  100   192 0.923  22.38
 7.12 Intr + 175737 175794   58  2  1   97   89    66 0.940   6.06
 7.13 Intr + 175875 175942   68  1  2   83   94    83 0.985   7.02
 7.14 Intr + 176053 176124   72  0  0  130   42   122 0.997  11.40
 7.15 Intr + 181534 181671  138  0  0   86   82   349 0.975  34.76
 7.16 Term + 184640 184705   66  1  0  139   50    53 0.715   4.54
 7.17 PlyA + 186042 186047    6                               1.05

 8.04 PlyA - 190603 190598    6                               1.05
 8.03 Term - 199141 199112   30  1  0  127   43    -1 0.519  -2.85
 8.02 Intr - 200435 200185  251  0  2   78   86   123 0.512   8.26
 8.01 Init - 202485 202449   37  0  1   70  107    62 0.267   4.51

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815579r:38925414_39132227|GENSCAN_predicted_peptide_1|117_aa
MARRLWPLLTRRGFRPRGGCISNDSPRRSFTTEKRNRNLLYEYAREGYSALPQLDIERFC
ACPEEAAHALELRKGELRSADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAVRALL

>gi568815579r:38925414_39132227|GENSCAN_predicted_CDS_1|351_bp
atggcgcggcgcttgtggcctttgctgactcgtcgggggttccggccccggggaggctgc
atctccaacgatagtccaaggagaagtttcactacagagaaacgaaaccggaacctcctg
tacgagtatgcgcgcgagggctacagcgcactccctcagctggacatagagcggttctgc
gcatgcccagaagaggccgcacacgccctggagctccgcaagggggagctgcgctcggcg
gacctgcccgcgatcatctcgacatggcaggagctgaggcagctgcaggagcagatccgg
agcctggaggaagagaaggcagctgtgactgaggcagtgcgggccctgctg

>gi568815579r:38925414_39132227|GENSCAN_predicted_peptide_2|109_aa
MATLNQMHRLGPPKRPPRKLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRLSTGR
EAVCFIPGEGHTLQEHQIVLVEGGRTQDLPGVKLTVVRGKYDCGHVQKK

>gi568815579r:38925414_39132227|GENSCAN_predicted_CDS_2|330_bp
atggctaccctgaaccagatgcaccgcctggggccccccaagcggccgcctcggaagctg
ggccccacggaaggccggccgcagctgaagggtgtggtcctgtgcacgtttacccgcaag
ccgaagaagcccaactcagccaatcgcaagtgctgtcgagtgcggctcagcactggccgc
gaggccgtctgcttcatccctggggagggccacaccctgcaggagcaccagattgtcctt
gtggagggcggccgcacccaggacctgccaggcgtcaagctcaccgttgtgcgtggcaag
tacgactgtggccacgtgcagaagaagtga

>gi568815579r:38925414_39132227|GENSCAN_predicted_peptide_3|383_aa
MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL
LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR
GWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIE
ICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFG
KGIRYVSFEQYGRDFLQFKTWWADEASIQAPRNTQAQPQIDITAHQLLGVGGWAGLDAQV
VMQDDAIEQLRGVCIRAWEKITSGGEQYPSFGAVKQGPKEPYTDFIARLQEYLKKVIADS
AAQDIVLRLLAFDNANLNCQAAL

>gi568815579r:38925414_39132227|GENSCAN_predicted_CDS_3|1152_bp
atgggcgcccggctatcgcggcgacggctgccggcggacccatccctggccctggacgcg
ctgcccccggagctgctggtgcaggtgctgagccacgtgccgccacgctccttggtcacg
cgatgccgcccagtgtgccgcgcctggcgcgacatagtggacgggcccactgtgtggctg
ctgcagctggcccgcgaccgcagcgccgagggccgcgcactctacgcagtggctcaacgc
tgcctgcccagcaacgaagacaaggaggagttcccgctgtgcgccctggcgcgctactgt
ctgcgcgcgcccttcggccgcaatctcatcttcaactcctgcggagagcagggcttcaga
ggctgggaggtggagcatggcgggaacggctgggccatagaaaagaacctaacaccggtg
cctggggctccttcgcagacctgcttcgtgacctctttcgaatggtgctccaagaggcag
cttgtggacctggtgatggaaggggtgtggcaggagctgctggacagcgcccagattgag
atctgtgtggctgactggtggggcgctcgagagaactgcggctgcgtctaccagctccgg
gtccgccttctggatgtgtatgaaaaggaagtggtcaagttctcagcctcacctgacccg
gtccttcagtggactgagaggggctgccgacaggtctcccacgtcttcaccaactttggc
aagggcatccgctacgtatcttttgagcagtacgggagagacttcttacaatttaaaact
tggtgggcagatgaagcttccattcaggctcctcgcaacacccaggcccaacctcaaatt
gatataactgcacaccaacttttgggggtcggcggctgggctggtttagatgcacaggtg
gtcatgcaggatgatgccatagagcagcttagaggagtgtgcatcagagcttgggaaaaa
atcacttcaggtggagaacagtacccttcctttggtgctgtaaaacagggaccaaaagaa
ccgtacacagattttatagctcggttacaggagtatcttaaaaaggtgattgcagattcg
gctgctcaggatatagtgttgcggttattagcttttgacaatgctaatctcaattgccag
gctgctctgtga

>gi568815579r:38925414_39132227|GENSCAN_predicted_peptide_4|88_aa
MAQCSLSLLGSSDLPAFAFRTAGTTAGATRSWRTSKRIGQECSLWTVTWKTANLQDLKDK
AASLSVVQQEGLDNKNPSSGLVPPTLCP

>gi568815579r:38925414_39132227|GENSCAN_predicted_CDS_4|267_bp
atggctcagtgcagcctcagcctcctgggctcaagtgatcttcctgctttcgccttccga
acagctgggactacagctggtgccacgaggagctggcggacctccaagagaattggccaa
gaatgcagcctctggacagtgacctggaaaactgctaacctccaagacttgaaagataaa
gctgccagtctttcagttgtacaacaagaaggcctggacaacaagaacccttcttctgga
ttggttccaccgacgctttgtccttga

>gi568815579r:38925414_39132227|GENSCAN_predicted_peptide_5|283_aa
MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL
VDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCG
QEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPELLD
SGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHVTHV
FSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS

>gi568815579r:38925414_39132227|GENSCAN_predicted_CDS_5|852_bp
atgggcgcctcggtctccaggggccgggccgcccgggtccccgcgccggagccggaaccc
gaagaggcgctggacctgagccaactacccccagagctgcttctggtggtgctgagccac
gtccccccgcgcacgctgctcgggcgctgccgccaagtgtgccggggctggcgagccctg
gtggacggccaggccctgtggctgctgatcctggcccgcgaccacggcgccaccggccgc
gcgctgctgcacctcgcccgcagctgccagtctcccgcccgtaacgccaggccttgcccc
ctgggccgcttctgcgcgcgcagacccatcggacgcaaccttattcgcaacccctgcggc
caagaaggcctccgaaagtggatggtgcaacacggtggggacggctgggtggtggaggaa
aacaggacaaccgtgcctggggccccttctcagacgtgcttcgtgacttcattcagctgg
tgttgcaagaagcaggtcttggacctagaggaggagggtctgtggccagaactgctggat
agtggcaggattgagatttgtgtctctgactggtggggagcccgacacgacagcggctgt
atgtacagactcctcgtccaacttctagacgccaaccagactgttctagataaattctct
gctgtgcctgatcccatcccgcagtggaacaacaatgcctgccttcacgtcacccacgtg
ttctccaacatcaagatgggcgtccgctttgtgtctttcgaacaccggggccaggacaca
cagttctgggctggccactatggagcccgtgtgaccaactccagtgtgatcgtgcgagtc
cgtctgtcctag

>gi568815579r:38925414_39132227|GENSCAN_predicted_peptide_6|156_aa
MRDRDKLQLFFLHLSFLESAIKTPPLFGNIRNEKTPFKDTPKKRSTALVNRSTRNVDRQL
GMKLESHHMMDSCVFTFDQYWDPFKSVISTFTDSSAKWRLTYGSIVKSTAHTISQCLCMG
TKQGRRHLGQGALQRSSSTSTNDPVCIGSAGNYQEL

>gi568815579r:38925414_39132227|GENSCAN_predicted_CDS_6|471_bp
atgagggacagagacaaactgcagctgttcttcctccacttgtccttcctggagagtgca
ataaaaacacctcctttatttggtaacataaggaatgagaaaacccctttcaaagacacg
ccaaagaagagatcaactgccttagtaaacagatctacacgtaatgtagaccgccagtta
gggatgaagttagaatctcaccacatgatggattcctgtgtcttcaccttcgaccagtac
tgggatcctttcaagagtgtcatcagcaccttcacagatagctctgcaaaatggcggcta
acctatggctccattgtcaagtcaacagcccacactatttcccaatgcctttgtatgggg
accaagcagggccggcggcacctgggccagggtgctctgcagagatctagttccacctcc
accaacgaccccgtgtgcataggttcagctggaaactaccaggaactctag

>gi568815579r:38925414_39132227|GENSCAN_predicted_peptide_7|649_aa
MILSEKTDSQKLVFERGLNVVDNCAAGPTPESLWRAGVFLEVGYTELTTLLLTMHSVTHA
SALTDPPVGEHCLIILCSPSSQPFLLYLWGADLLSPPAFPRSAITTPPPCTPFLATGPVT
VYSCYSPWESRGPWGLPALPQSKSICLTQFQSCFHIFRYLFSNTPLYWYQLTILVHFHAA
DKDIPKTGKKKRFNWTYSSIWLGRPQNHGRSAGFTGMSQYTWLVKSISDMAVARENEKEA
KVETPDKLIRSREPGSMTVTWTTWVPTRSEVQFGLQPSGPLPLRAQGTFVPFVDGGILRR
KLYIHRVTLRKLLPGVQYVYRCGSAQGWSRRFRFRALKNGAHWSPRLAVFGDLGADNPKA
VPRLRRDTQQGMYDAVLHVGDFAYNLDQDNARVGDRFMRLIEPVAASLPYMTCPGNHEER
YNFSNYKARFSMPGDNEGLWYSWDLGPAHIISFSTEVYFFLHYGRHLVQRQFRWLESDLQ
KANKNRAARPWIITMGHRPMYCSNADLDDCTRHESKVRKGLQGKLYGLEDLFYKYGVDLQ
LWAHEHSYERLWPIYNYQVFNGSREMPYTNPRGPVHIITGSAGCEERLTPFAVFPRPWSA
VRVKEYGYTRLHILNGTHIHIQQVSDDQDGKIVDDVWVVRPLFGRRMYL

>gi568815579r:38925414_39132227|GENSCAN_predicted_CDS_7|1950_bp
atgattttatccgagaagactgacagtcagaagcttgtgtttgaaagaggattaaacgtg
gtagataactgtgctgctgggcccacgcctgagagcctgtggagggctggggtgttcctg
gaggtaggatacacagagctgaccacactcctgctgaccatgcacagcgtgacccacgct
tcagccctgacagatcccccagttggtgagcactgcctgatcatcctctgttccccatcc
tcccagcccttcctgctgtacctgtggggagctgatctcctcagtccccctgcttttccc
cggtctgccatcaccaccccaccaccatgcacccccttcctggctactggtcctgttact
gtctactcctgctattctccttgggagtccaggggtccctgggggctcccagcgctgccc
cagagcaagtccatctgtcttacccagttccaaagctgcttccacattttcaggtatctt
ttcagcaacaccccactctactggtaccagcttactatattagtccattttcatgctgct
gataaagacatacccaagactgggaagaaaaagaggtttaattggacttacagttccata
tggctggggaggcctcagaatcatggcagaagtgctgggtttacaggcatgagccaatac
acctggctagtgaaaagcatttctgacatggcggtggcaagagaaaatgagaaagaagca
aaagtggaaacccctgataaactcatcagatctcgtgagccaggctccatgactgtaact
tggaccacatgggtcccaacccgctctgaagtgcaattcgggttgcagccgtcggggccc
ctgcccctccgcgcccagggcaccttcgtcccctttgtggacgggggcattctccggcgg
aagctctacatacaccgagtcacgcttcgcaagctgctgccaggggttcagtatgtttat
cgctgtggcagtgcgcagggctggagccgtcggttccgcttcagggccctcaagaatggg
gcccactggagtccccgtctggctgtgtttggagacctgggggctgacaacccgaaggcc
gtcccccggctgcgcagggacacccagcagggcatgtatgacgccgttctccatgtggga
gactttgcctacaacctggatcaggacaacgcccgtgttggggataggttcatgcggctc
attgaacccgtggctgccagcctgccgtacatgacatgccctgggaatcatgaagaacgc
tacaacttctctaactacaaggctcgcttcagcatgccgggggataatgagggcctgtgg
tacagctgggatctgggtcccgcccacatcatctccttctccaccgaggtctatttcttt
ctccattatggccgccacttggtacagaggcagtttcgctggctggagagcgacctccag
aaagccaataagaaccgggcagcccggccgtggatcatcactatggggcaccggcccatg
tactgctccaacgcagatctggacgactgcacacgacatgaaagcaaggtccgcaaaggc
ctccaaggcaagctgtacgggttggaggatcttttctacaaatatggagtggatctgcag
ctgtgggctcatgagcactcgtatgaacgactgtggccaatttacaactaccaggtattt
aacggcagccgagagatgccctacaccaacccgcgagggcctgtccacatcatcacagga
tctgctggctgtgaggagcggctgacgccctttgctgtcttcccgaggccctggagtgcc
gtgcgtgtgaaggagtacgggtatacgcggctgcacatcctcaacgggacccacatccac
atccagcaggtgtcggacgaccaggatgggaagatcgtagatgatgtctgggtggtgaga
cccctgtttggccggaggatgtacctctag

>gi568815579r:38925414_39132227|GENSCAN_predicted_peptide_8|105_aa
MPGPLHTLLLLPALLHRHHRGHSRRHVESPTNIRGFPPSPPTSPHSNEADRAVGRASAGA
ESGASQGPLQPPIGTERPIGDLRAENAKRGLEILEKGFTQMSLSL

>gi568815579r:38925414_39132227|GENSCAN_predicted_CDS_8|318_bp
atgccagggcctctgcacacactgctcctcctgcctgctctcttgcaccgccaccaccgc
ggacactcccgccgccatgttgaatccccaacgaacatccggggctttcccccctcaccg
cccaccagtccccatagcaacgaggctgaccgggcagtgggcagggccagtgcgggggcg
gagtcgggcgcctctcagggcccgctccagcctccgattggtacagagcgtccaatcgga
gaccttcgggcagaaaatgccaagcggggattggaaattttggaaaagggctttacacag
atgtcactttctctgtga