GENSCAN 1.0	Date run:  8-Nov-116	Time: 04:52:52

Sequence gi568815580f:59800178_60002750 : 202573 bp : 42.22% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -     31     26    6                               1.05
 1.03 Term -   1918   1824   95  2  2   72   39    61 0.067  -3.39
 1.02 Intr -   2172   1963  210  1  0   65  101    89 0.091   5.86
 1.01 Init -   7795   7723   73  1  1   48   97    66 0.349   4.78
 1.00 Prom -  10608  10569   40                              -6.15

 2.00 Prom +  14111  14150   40                              -5.15
 2.01 Sngl +  14826  15077  252  2  0   50   54   225 0.463  10.14
 2.02 PlyA +  15200  15205    6                               1.05

 3.00 Prom +  20889  20928   40                              -3.65
 3.01 Init +  23585  23648   64  1  1   74   91    33 0.357   2.38
 3.02 Intr +  23896  24164  269  2  2   32   45   294 0.642  15.83
 3.03 Intr +  24560  24841  282  1  0  -19  -43   360 0.704   8.89
 3.04 Term +  24926  25087  162  1  0   15   37   222 0.699   6.75
 3.05 PlyA +  25135  25140    6                               1.05

 4.00 Prom +  25188  25227   40                              -4.55
 4.01 Init +  44031  44144  114  2  0   67   81   111 0.807   8.56
 4.02 Term +  53095  53208  114  0  0   57   53    91 0.179   0.09
 4.03 PlyA +  53484  53489    6                               1.05

 5.16 PlyA -  53519  53514    6                               1.05
 5.15 Term -  54532  54235  298  0  1   35   38   161 0.216  -0.45
 5.14 Intr -  57617  57368  250  0  1   36   62   237 0.104  11.47
 5.13 Intr -  64251  64134  118  0  1   40   61   106 0.043   2.22
 5.12 Intr -  85543  85365  179  2  2   89   17    80 0.008  -0.28
 5.11 Intr -  97539  97486   54  1  0   64   90    50 0.142   0.83
 5.10 Intr -  99707  99558  150  0  0  109   59   131 0.917  11.51
 5.09 Intr - 100069  99839  231  2  0   62  113   252 0.916  21.92
 5.08 Intr - 100415 100264  152  1  2   53  -26   218 0.214   5.79
 5.07 Intr - 118476 118233  244  1  1   66   27   155 0.100   2.83
 5.06 Intr - 121534 121483   52  1  1   46  108    20 0.650  -2.64
 5.05 Intr - 121806 121674  133  2  1   47   94    72 0.778   3.43
 5.04 Intr - 123221 123115  107  2  2   66   61    76 0.777   0.79
 5.03 Intr - 124778 124581  198  2  0   50   33   166 0.826   5.93
 5.02 Intr - 129211 129136   76  0  1   85   81    60 0.635   3.60
 5.01 Init - 132999 132701  299  0  2   53   48   195 0.783   8.74
 5.00 Prom - 134866 134827   40                              -6.45

 6.00 Prom + 146730 146769   40                              -7.65
 6.01 Init + 152059 152096   38  0  2   62  116    43 0.185   4.03
 6.02 Intr + 164621 164666   46  2  1  107   64    34 0.031   0.39
 6.03 Term + 169373 169966  594  1  0   -3   48   611 0.723  41.54
 6.04 PlyA + 169968 169973    6                              -6.47

 7.00 Prom + 170114 170153   40                             -13.11
 7.01 Sngl + 170325 171197  873  2  0    3   49   493 0.992  32.59
 7.02 PlyA + 171711 171716    6                               1.05

 8.06 PlyA - 172678 172673    6                               1.05
 8.05 Term - 174776 174657  120  2  0   36   53   121 0.522   0.89
 8.04 Intr - 179566 179460  107  2  2   56   75    65 0.351   1.01
 8.03 Intr - 181237 181138  100  1  1   60   50    97 0.497   1.86
 8.02 Intr - 186362 186178  185  0  2   68   92   204 0.472  17.39
 8.01 Init - 187122 187014  109  0  1   50   88    72 0.611   3.83

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580f:59800178_60002750|GENSCAN_predicted_peptide_1|125_aa
MGVDYAIGVVVPQETREKQGWAALGKRHERSARPAGIRVQKPVSSCIYPDFRDPATGPPR
RLADSTVKILLDLTQSETFCHDEGQEQEIYQACSVNILFTCGKNQSTSVVTYHLIDVYTP
IVMGK

>gi568815580f:59800178_60002750|GENSCAN_predicted_CDS_1|378_bp
atgggggtggactatgcaattggtgttgtggtgccacaggaaacaagagaaaaacaaggg
tgggcagctcttggaaagagacatgagcgctctgcaaggccagccgggatcagggtccag
aagcctgtgtcatcctgtatctacccagacttcagggaccctgccactggcccacccaga
aggctggcagattctactgtcaaaatattgttggatctgactcaaagtgaaactttctgt
catgacgaagggcaagaacaggaaatttaccaagcttgcagcgtgaatattctttttaca
tgtggcaaaaatcagtccacttccgttgtaacataccacctgatagatgtctatacacct
attgtgatgggcaaataa

>gi568815580f:59800178_60002750|GENSCAN_predicted_peptide_2|83_aa
MNMNSFKMCEETKKEDDMGSRKWDDDALGMATKDIPRMMGNSRVIVQQALELLVQIGVVG
QTAPKGMSSKKFQKGKRKKEKRN

>gi568815580f:59800178_60002750|GENSCAN_predicted_CDS_2|252_bp
atgaatatgaactcctttaagatgtgtgaggaaaccaagaaagaagatgacatgggatcc
aggaaatgggatgatgatgcactcggaatggcaactaaggacattccaagaatgatggga
aattccagggtgattgtacagcaggccttggagctactcgtccagatcggagtagtagga
caaaccgctccaaaagggatgtcttcaaaaaaatttcaaaaaggaaaaagaaagaaagaa
aaaagaaattga

>gi568815580f:59800178_60002750|GENSCAN_predicted_peptide_3|258_aa
MAQGLLSSLSIELTAPSLVLPDHPAFGWLSEMFHGGSRQSGLQADAADPQVPPREGHGAD
GQETMMLKAIQGHLENSRALEKLLPRIQGNVGFVFTKEDLTEIRDMLVASKASSLKPLGT
TEILSDVQLIKTGVKVGASEATLLNMRNISPFSFGLVIQQVFDNGSIYNTEVLDITEEIL
NPHFLEGVRNIANVCLQIGYPAVASFKVFLVDPYAFAAATPVATATTAAPSAAAASAKIE
AKEELEELDEDTGFGLFD

>gi568815580f:59800178_60002750|GENSCAN_predicted_CDS_3|777_bp
atggctcagggcctgctgtcttctctttctattgagctcacagcgccatctcttgtcctc
ccagatcatccagcttttggatggttatccgaaatgtttcatggtgggagcagacaatct
gggctccaagcagatgcagcagatcctcaagtccctccgagggaaggccatggtgctgat
gggcaagaaaccatgatgctcaaggccatccaagggcacctggaaaacagccgagctctg
gagaaactgttgcctcgtatccagggaaatgtgggctttgtgttcaccaaggaggacctc
actgagatcagggacatgctggtagccagtaaggcatcatcactaaaacctttgggcacc
actgaaatcctgagtgatgtgcagctgatcaagactggagtcaaagtgggagccagcgaa
gccacactgctgaacatgcggaacatctctcccttctcctttgggctggtcatccagcag
gtgtttgacaatggcagcatctacaatactgaagtgcttgacatcacagaggaaattctg
aatcctcacttcctggagggtgtccgcaacattgccaatgtctgtctgcagattggttat
ccagctgttgcctccttcaaggtgttcttggttgatccatatgcctttgcggctgctacc
cctgtggccactgccaccacagctgctccttctgctgctgcagcctcagctaagattgaa
gccaaggaagagttagaggaattggatgaggatacaggatttggtctctttgactaa

>gi568815580f:59800178_60002750|GENSCAN_predicted_peptide_4|75_aa
MVCPELIHEESDSECGTLCTRAVLDSSKESLLSKTESKFSGYPRVGLPDGDGYVTPPAAI
SCTVLTFCSSDHNKN

>gi568815580f:59800178_60002750|GENSCAN_predicted_CDS_4|228_bp
atggtttgtcctgaacttattcatgaggaatcagactcagaatgtggaacactctgcaca
agagctgtcctggactcttcaaaagagtcattgctcagcaaaacagaaagcaagttctca
ggatatccccgggttggccttcctgatggtgatggttatgtgactccacctgctgctatc
tcttgtactgtgctaacattttgctctagtgatcataacaagaattga

>gi568815580f:59800178_60002750|GENSCAN_predicted_peptide_5|846_aa
MLASMGVVAKEMKYLSSPYPQHAFHTRIKSLMTVNFQAQLWLPNEAGPTGDGDWGGDTHG
CPSFSPHLPRFIQKQPWGTGRRLLQEHFSCKSLVPVIPSRDIEAFHLHADLILNTLPSLV
IIIGQIESHSEELRARVSTYESGEDTIQCITVTWKPKYGATRWKDPGSPDGPLEERRLED
LSTRNNSIRLFRGCGYRVKQNSSQRPNKVCGLPDTGVLLQTKCGLVRNSQRSAQTNTKQH
EELFSTAGIPENLSRRQEVLPGHGFTGWVGWTWKLTSGEGVTFHHLSATHKLSHASCRQG
NFKPKGAMSVTRSTVHPHLAFLSAEINGKCGRPCVFLGIWAINCGMAILYERLSALVCVS
VSERHLDYTIDSRLHLHLFLVAPGKGKWRGGKRGGKELFAPGETQLHPNRKSGLVPRRTR
PGRYLLEPARGSVERSCAPSSQASPPVPPPTQLQSPGTSASNWSTSDSCRTRAEHEQSCR
QGCWDRVSGRAEMPTTHDGVMGADAGRGRGSTPLSATCPDTLPTRGGADPRRGAQSARPR
NYFLTKRGNCKFSLQGGKERKEVGRGSQELCPIGALELWAKGGLGPAQIPWAALAPKRHS
SSTYQALSVLTLLLSDINSDSLMQEKNTSHTTEGEYTTEQRQSQKLPRALVHCYVDELLL
KMAAGDFCHPLRMPQSPVMRGKGKLQSGDSFSPCLDDTEESTEGSTLYSWFHPTHVHLWL
PGEKSPVHRDRNGFCHRVGKRGEVADERDVIHCAWVGGLHCLKAPPDDANVQPRLRRPAP
DQGSRTRRASESQDGLLAGLHSQVSSAVVQVWGLRICISNMLPGGPGSSWSQRAHYEEHF
DPVYAS

>gi568815580f:59800178_60002750|GENSCAN_predicted_CDS_5|2541_bp
atgttggcatctatgggagttgtggccaaggaaatgaaatatctgagctcaccttatccc
cagcatgcatttcataccaggatcaaatcactaatgaccgtgaatttccaggctcaacta
tggctgcctaatgaggctggccccactggggatggggactggggaggggacacacacggg
tgcccaagcttcagtccacatctccctcggttcatccagaagcagccatggggcacagga
agacgtctgcttcaagagcatttcagctgcaaaagtctggttcctgtaattccctcccgg
gatattgaggcattccacttgcatgcggaccttatcctcaacactctgccaagtctggtc
atcataataggtcagatagagtcacattctgaggaactgcgggctagagtttcaacatat
gaatctggggaagatacaattcagtgcataacagtgacctggaagccaaaatatggagcc
acaagatggaaggatcctggatccccagatggccccttggaagagagaagactagaagac
ctctcaactaggaacaacagcattagactttttagaggctgcggctatcgggtgaaacag
aactcctcacagagaccaaacaaggtttgtgggttaccagacactggtgttctcttacag
acaaagtgtggtcttgtcagaaatagccaaagatcagcacaaacaaacacaaagcagcat
gaagaactgttttctactgctggaataccagaaaatctgagcaggagacaagaagtgttg
ccaggacatggctttactggttgggttggttggacatggaaattgacatctggagaagga
gtgactttccaccatctctcagcaacacacaagctgagtcatgccagctgccggcagggc
aattttaagcccaaaggggccatgtccgtcacccgatccacagtacacccacacctagct
ttcctgtctgcagagataaacggcaaatgcgggaggccatgtgtctttctgggtatctgg
gccatcaactgtggaatggccattttatatgagcgtttatcagccttggtttgtgtatca
gtgtcggagagacacctggattatacaatagacagccgcctacacttgcacttgttcctc
gtggccccggggaagggcaagtggcgaggaggaaagagaggaggaaaggagctttttgcc
cctggtgaaacgcagctgcatcccaatcgcaaatccggcttggtccctcgccgtacccgc
ccgggtcggtacctgctggagcccgcgcggggctcggttgagcgttcttgcgcgccttct
tcccaggcatctccgccggtgccgccgcccactcagctacagagcccgggaacctcagcc
tccaactggagcacctcggacagctgcaggacgcgagctgaacacgaacagtcctgcagg
cagggatgctgggatcgggtgtccggacgcgcggagatgccaactacacacgacggcgtt
atgggagcggacgcgggacgcgggcggggaagtaccccgctgagcgcgacctgcccggac
acgctcccgacccgcggcggcgccgacccgcggcggggggcgcagagcgctcggccccga
aattacttccttacaaaacgagggaattgcaaattcagcttgcaaggaggaaaagagcgg
aaagaagtcgggcgagggtcccaggaactctgccctattggagctctggagctttgggct
aaaggaggcttgggtccagcacagattccctgggcggctttggctcccaagagacacagc
agctctacgtaccaggcactgtcagttttgacattgttgctgtcagatattaactctgat
tccttaatgcaggaaaaaaacacttcccatacaactgaaggtgaatacacaacagaacaa
cgacagtcccagaagcttccccgggccttggtgcattgttatgtagatgagcttttgcta
aagatggctgcaggggatttctgtcaccccctgcggatgccacagtcccctgtgatgagg
ggaaaggggaaactgcaaagtggggacagcttcagcccctgccttgatgacactgaggag
tctacagaggggtctacgctatattcctggtttcatccaactcatgttcatctgtggcta
cctggggaaaagagcccagttcacagggacagaaatggtttctgccatcgcgttggcaag
agaggggaagtggctgatgaaagagatgtgattcattgtgcctgggttggaggcctgcat
tgtttgaaagctcccccagacgatgctaacgtacagcccaggttgaggaggccagctcca
gaccaggggtcccgcactcggcgtgcatcagaatcacaggacggcttgcttgctgggctc
catagccaagtttctagtgcagtagttcaggtatggggcctaagaatctgcatttctaac
atgctcccaggtggtccagggagctcctggtcccagagagcacactatgaggagcacttt
gatcctgtctatgccagttag

>gi568815580f:59800178_60002750|GENSCAN_predicted_peptide_6|225_aa
MAFEEDPWERGKSNAALSPYSFHENSANGRELDAAAQPEGQLLREVRVLGVPFIPRARVD
AWLVHTVAVGSADEAHGLLGAAAASSTGGAGASVDGGSQAVQGGGGDPRAARSGPLDAGE
EEKAPAEPTAQVADAGGCASEENEVLREKHEAVDHSSQREENEERVSALKENSLQQNNDD
ENKIAEKPDWEAEKTSESRNERHLNGADTSFFLSGRLIPVAFITA

>gi568815580f:59800178_60002750|GENSCAN_predicted_CDS_6|678_bp
atggcctttgaggaagatccatgggaaagagggaaaagcaatgcagctctctcgccttat
tctttccatgaaaattctgctaatggccgggagctggacgctgccgcgcagcccgagggc
cagctgctccgggaggtgcgcgtgctcggggtccccttcatccctcgcgcccgggtggat
gcgtggctggtgcacaccgtggctgtcgggagcgcggacgaggcccacgggctgctcggc
gccgccgccgcctcgtccaccggaggagctggcgccagcgtggacggcggcagccaggct
gtgcaggggggcggcggggatccccgagcggctcggagtggtcccttggacgccggggaa
gaggagaaggcacccgcggaaccgacggctcaggtggcggacgctggcggatgtgcgagc
gaggagaacgaggtactaagagaaaagcacgaagctgtggatcatagttcccagcgtgag
gaaaatgaagaaagggtgtcagccctgaaggagaactcacttcagcagaataatgatgat
gaaaacaaaatagcagagaaacctgactgggaggcagaaaagacctctgaatctagaaat
gagagacatctgaatggggcagatacttctttctttctctctggaagacttattccagtt
gctttcatcacagcctga

>gi568815580f:59800178_60002750|GENSCAN_predicted_peptide_7|290_aa
MSLATEDNFDPIDVSQLFDEPDSDSGLSLDSSHNSTSVIKFNSSHSVCDEGAIGYCTDRD
SSSHHDLEGAVGGYYPEPSKLCHLDQSDSGFHGDLTFQHIFHNHTYHLQPSAPESTSEPF
SWPGKSQKIRSRYLEDTDRNLSRDEWSAKALRIPFSVDEIVGMPVDSFNSMLSRYYLTDL
QVSLIRDIRRRGKNKVSAQNCRKRKLDIILNLEDDVCNLQAKKETLREQAQCNKAINIMK
QKVHDLYHDIFSRLRDDQGRPVNPNHYALQCTHDGSILIVPKELVASGHK

>gi568815580f:59800178_60002750|GENSCAN_predicted_CDS_7|873_bp
atgtcattggccacagaagacaacttcgatccgatcgatgtttctcagctttttgatgaa
ccagattctgattctggcctttctttagattcaagtcacaatagtacctctgtcatcaag
tttaattcctctcactctgtgtgtgatgaaggtgctataggttattgtactgaccgtgac
tctagttcccatcatgacttagaaggtgctgtaggcggctactacccagaacccagtaag
ctttgtcacttggatcagagtgattctggtttccatggggatcttacatttcaacacata
tttcataaccacacttaccacttacagccaagtgcaccagaatctacttctgaacctttt
tcgtggcctgggaagtcacagaagataaggagtaggtaccttgaagacacagatagaaac
ttgagccgtgatgaatggagtgctaaagctttgcgtatccctttttctgtagatgaaatt
gtcggcatgcctgttgattctttcaatagcatgttaagtaggtattatctgacagaccta
caagtctcacttatccgtgatatcagacgaagagggaaaaataaagtttctgcgcagaac
tgtcgtaaacgcaaattggacataattttgaatctagaagatgatgtatgtaacttgcaa
gcaaagaaggaaactcttagagagcaagcacaatgtaacaaagctattaacattatgaaa
cagaaagtgcatgacctttatcatgacatttttagtagattaagagatgaccaaggtagg
ccagtcaatccaaaccactatgctcttcagtgtacccatgatggaagtatcttgatagta
cccaaagaactggtggcctcaggccacaaatag

>gi568815580f:59800178_60002750|GENSCAN_predicted_peptide_8|206_aa
MAPPPNTVTLVLVSTYEFGGNINIQAIVPRNLECQEGPGGNGSVIKEEKMGVSRKKQGET
MAYKDKVEHTWPGRIPPQSLSAPNFSEERDLLVLVLTKQHLAVTPLSMAPSDPKVTTPSL
HKTTLNLHAIKIKCLNRAPFSGDFPKSKVILDDWYQTFMFQQMHSGKRYEQRENGRKRAS
IKIKERCETNKAVSKQSWLPAILDGK

>gi568815580f:59800178_60002750|GENSCAN_predicted_CDS_8|621_bp
atggccccacctccaaatactgtcactctggttttggtttcaacctatgaatttggaggg
aatataaacattcaggctatagtaccaaggaaccttgagtgtcaagaaggccctggaggg
aatgggtctgtcattaaagaagaaaagatgggcgtgagtaggaaaaagcaaggagaaacc
atggcctacaaggacaaggtggaacatacgtggccaggccgaatcccacctcagtctctc
agtgcccccaacttcagcgaggaacgtgacctgctggtactcgtcctcacaaagcaacac
ctggcagttacccccctttccatggcacccagtgatccaaaagttactaccccttccctg
cataaaacgacccttaatctgcatgcaattaaaattaagtgcctaaacagagctccattc
agtggggatttcccaaaaagtaaagtgatattggatgactggtaccagacttttatgttc
cagcagatgcatagcggtaagagatatgagcaacgagaaaatgggcgaaaaagagccagc
atcaagattaaagagagatgtgagactaacaaggcagtgagcaagcaatcctggctgcct
gctatccttgatggcaaatga