GENSCAN 1.0	Date run:  8-Nov-116	Time: 15:00:11

Sequence gi568815581f:29149141_29354346 : 205206 bp : 44.93% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   4565   4623   59  0  2  150   48    50 0.351   5.05
 1.02 PlyA +  11077  11082    6                               1.05

 2.03 PlyA -  11383  11378    6                               1.05
 2.02 Term -  14561  14439  123  2  0   84   37    62 0.229  -0.92
 2.01 Init -  17800  16802  999  1  0   76   76  1425 0.369 133.50
 2.00 Prom -  26225  26186   40                              -7.36

 3.00 Prom +  26617  26656   40                              -4.56
 3.01 Init +  27820  27880   61  0  1   96   55    36 0.798   2.45
 3.02 Term +  30918  31459  542  1  2  113   54   165 0.756  10.02
 3.03 PlyA +  34418  34423    6                               1.05

 4.05 PlyA -  34479  34474    6                               1.05
 4.04 Term -  42743  42534  210  2  0   32   48    97 0.137  -2.61
 4.03 Intr -  48020  47982   39  2  0   88   75    46 0.312   1.72
 4.02 Intr -  48659  48581   79  1  1  118   86    56 0.641   7.95
 4.01 Init -  50503  50463   41  1  2   52   63    77 0.711   1.29
 4.00 Prom -  52322  52283   40                              -5.76

 5.02 PlyA -  52439  52434    6                               1.05
 5.01 Sngl -  55334  54537  798  2  0   99   48   336 0.979  26.56
 5.00 Prom -  69383  69344   40                              -4.66

 6.00 Prom +  71072  71111   40                              -0.26
 6.01 Init +  76228  76311   84  0  0   77   80    69 0.503   5.82
 6.02 Intr +  91493  91519   27  1  0  100   94    -1 0.138   0.01
 6.03 Intr +  92457  92545   89  2  2  108   58    62 0.218   3.97
 6.04 Intr + 100002 100066   65  0  2   88  121    85 0.098  10.16
 6.05 Intr + 101013 101160  148  1  1   87   77    82 0.338   6.29
 6.06 Intr + 102924 103065  142  0  1   50   68    88 0.878   3.36
 6.07 Intr + 104500 104635  136  0  1   23    9   207 0.697   6.44
 6.08 Term + 105062 105213  152  0  2   66   38   171 0.873   7.97
 6.09 PlyA + 105329 105334    6                               1.05

 7.06 PlyA - 106388 106383    6                               1.05
 7.05 Term - 115451 115399   53  0  2   81   49    47 0.304  -2.31
 7.04 Intr - 118390 118358   33  2  0  112  116     3 0.262   3.69
 7.03 Intr - 138576 136852 1725  1  0  123   88   876 0.852  78.42
 7.02 Intr - 144847 144643  205  1  1   47   41   201 0.002  10.07
 7.01 Init - 154834 154742   93  1  0   46   80    28 0.013  -1.82
 7.00 Prom - 185465 185426   40                              -2.36

 8.00 Prom + 186134 186173   40                              -2.96
 8.01 Init + 187961 187978   18  1  0   81  116     4 0.648   2.83
 8.02 Term + 194723 194866  144  1  0   81   28   103 0.929   1.51
 8.03 PlyA + 196078 196083    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:29149141_29354346|GENSCAN_predicted_peptide_1|19_aa
XELKAVPAAKTSPSKQLHV

>gi568815581f:29149141_29354346|GENSCAN_predicted_CDS_1|60_bp
natgagctgaaagcagttcctgcagccaaaactagtccttccaagcaacttcatgtttga

>gi568815581f:29149141_29354346|GENSCAN_predicted_peptide_2|373_aa
MFNLMKKDKDKDGGRKEKKEKKEKKERMSAAELRSLEEMSLRRGFFNLNRSSKRESKTRL
EISNPIPIKVASGSDLHLTDIDSDSNRGSVILDSGHLSTASSSDDLKGEEGSFRGSVLQR
AAKFGSLAKQNSQMIVKRFSFSQRSRDESASETSTPSEHSAAPSPQVEVRTLEGQLVQHP
GPGIPRPGHRSRAPELVTKKFPVDLRLPPVVPLPPPTLRELELQRRPTGDFGFSLRRTTM
LDRGPEGQACRRVVHFAEPGAGTKDLALGLVPGDRLVEINGHNVESKSRDEIVEMIRQSG
DSVRLKVQPIPELSELSRSWLRSGEGPRREPSDHRDHPGISDFPSFPFPTICCYPIPGEV
DGLALEALVDSKL

>gi568815581f:29149141_29354346|GENSCAN_predicted_CDS_2|1122_bp
atgtttaacctaatgaagaaagacaaggacaaagatggcgggcggaaggagaagaaggag
aaaaaggagaaaaaggagcggatgtcagcggcagagcttcggagcctggaggagatgagc
ctgcgacgtggcttcttcaacctgaaccgctcctccaagcgtgaatccaagacgcgcctg
gaaatctccaaccccatccccatcaaggtggccagcggctctgacctgcacctgactgac
attgactccgatagtaaccggggcagcgtcatcctggactcgggccacctaagtacagcc
agctccagcgatgacctcaagggtgaggagggtagcttccgtggctcggtgctgcagcgg
gcagccaagttcggctcactggccaagcagaactcacagatgattgtcaagcgcttttcc
ttctcccagcgtagccgggatgagagcgcctcagaaacctcgacgccctcagagcactct
gccgccccctcgccacaggtggaggtgaggactctagagggacagctggtgcagcatcct
ggcccaggcatccctcgaccagggcaccgatcccgagcccctgagctagtgactaaaaag
ttcccagtcgacctgcgcctgccccccgtggtgcccctgcccccacctaccctccgggag
ctggagctgcaacgacggcccactggagactttggcttctccctgcggcgcacaaccatg
ctggatcggggccccgagggccaggcctgtcggcgtgtggtccactttgctgagcctggt
gcaggcaccaaggacctggccctggggctggtgccaggagatcgactggtggagattaat
gggcacaatgtggagagcaagtccagggatgagattgtggagatgatccggcagtcaggg
gacagcgtgcggctcaaggtgcagcccattccagagctcagcgagctcagcaggagctgg
ctgcggagcggcgagggacctcgcagggagccatccgatcacagggatcatcctggcatc
tcagattttcctagctttcccttcccaactatctgctgctatcccatccctggggaagta
gatggtttagctttggaggccctggtggattccaagttatag

>gi568815581f:29149141_29354346|GENSCAN_predicted_peptide_3|200_aa
MEERERESSCGLARFPAALPGWLEGPVVPPSPPLPIGPHPRASSSTAPPGTGAGSPGRCF
QGTGEEEEEPAGPAARPPSLPAGARPAAPPSRARHRAAAAADRHSPATGARPAGSRSGDA
ASSSLGPVRDGAERSAAQLSAAPSDRAGRAERELPAGGCGDKRPACLAAPVRAARRGPGG
PGAALAASVRCGLRSPSRCV

>gi568815581f:29149141_29354346|GENSCAN_predicted_CDS_3|603_bp
atggaggaacgcgagcgggagagctcctgcggcctcgccaggttccctgctgctcttcca
ggttggctggaagggccggtggttcccccttccccgccgctcccgatcggcccccacccc
cgggcgtcgagctccacggcgccgccagggacgggagccgggagtccgggccgctgcttc
caggggacgggggaggaggaggaggagccggcgggccccgccgcccgcccgccctccctc
ccggccggagcccgccccgccgccccaccaagccgggcccgccaccgagcggccgccgcc
gccgaccggcactcaccggccaccggagcccgcccggcaggcagcagaagcggagacgcg
gcatccagcagcctcggcccggtcagggatggagcagagcgcagcgcggcgcagctcagc
gccgcccccagcgaccgcgcaggccgagccgaaagggagctccctgctggcggctgtggg
gataaacgcccggcctgcctggcagcgccagtgcgcgccgccagacgtgggccaggcggg
ccgggcgctgccctggcagcctccgtccgctgtggactccgaagcccctctcgctgtgtc
tga

>gi568815581f:29149141_29354346|GENSCAN_predicted_peptide_4|122_aa
MPVAILVDCVLQDQNHKMSDWSFLGWLLTRVQNDSTVVGKSHEEENLPELHVQRKLFTIK
SFTESVLTPELGHWEPLRNPKPRSDMIIFVLWKDNSGSHMEDQLEGMKRKQATTRRPLLL
SS

>gi568815581f:29149141_29354346|GENSCAN_predicted_CDS_4|369_bp
atgcctgtggccatcctagtggactgcgtcctccaggaccaaaatcacaagatgagcgac
tggtcattcctgggctggctcctgacccgagtgcagaacgattccaccgtggttggcaag
agccatgaggaagaaaatcttcctgaacttcatgtgcagcgtaaactatttaccatcaag
tcctttacagaaagtgtgctgacccctgagctgggccattgggaacctttgaggaatccc
aagccaagaagtgacatgatcatatttgtattatggaaagacaactctggcagccacatg
gaggaccagttagaggggatgaagcggaagcaggcgaccacgagaaggccgttgctattg
tccagctaa

>gi568815581f:29149141_29354346|GENSCAN_predicted_peptide_5|265_aa
MSHQTGIQASEDVKEIFARARNGKYRLLKISIENEQLVIGSYSQPSDSWDKDYDSFVLPL
LEDKQPCYILFRLDSQNAQGYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGHIKDE
IFGTVKEDVSLHGYKKYLLSQSSPAPLTAAEEELRQIKINEVQTDVGVDTKHQTLQGVAF
PISREAFQALEKLNNRQLNYVQLEIDIKNEIIILANTTNTELKDLPKRIPKDSARYHFFL
YKHSHEGDYLESIVLFIQCLDTHAV

>gi568815581f:29149141_29354346|GENSCAN_predicted_CDS_5|798_bp
atgtcccaccagaccggcatccaagcaagtgaagatgttaaagagatctttgccagagcc
agaaatggaaagtacagacttctgaaaatatctattgaaaatgagcaacttgtgattgga
tcatatagtcagccttcagattcctgggataaggattatgattcctttgttttacccctg
ttggaggacaaacaaccatgctatatattattcaggttagattctcagaatgcccaggga
tatgaatggatattcattgcatggtctccagatcattctcatgttcgtcaaaaaatgttg
tatgcagcaacaagagcaactctgaagaaggaatttggaggtggccacattaaagatgaa
atatttggaacagtaaaggaagatgtatcattacatggatataaaaaatacttgctgtca
caatcttcccctgccccactgactgcagctgaggaagaattacgacagattaaaatcaat
gaggtacagactgacgtgggtgtggacactaagcatcaaacactacaaggagtagcattt
cccatttctcgagaagcctttcaggctttggaaaaattgaataacagacagctcaactat
gtgcagttggaaatagatataaaaaatgaaattataattttggccaacacaacaaataca
gaactgaaagatttgccaaagaggattcccaaggattcagctcgttaccatttctttctg
tataaacattcccatgaaggagactatttagagtccatagttttatttattcaatgcctg
gatacacatgcagtataa

>gi568815581f:29149141_29354346|GENSCAN_predicted_peptide_6|280_aa
MVYSMRSSKTGIQKEKNHNSGGKAADKEDAVVGWSAWRQGQGVKAIHKIPLSIYAAWRVA
LVSRSPRNPSNHQDGSDQPYAGVPGAMEALLRHSISFQITIYDQENFQGKRMEFTSSCPN
VSERSFDNVRSLKVESGAWIGYEHTSFCGQQFILERGEYPRWDAWSGSNAYHIERLMSFR
PICSANHKESKMTIFEKENFIGRQWEISDDYPSLQAMGWFNNEVGSMKIQTGFATNILDI
VGISISWNVTIMEETINIGESGALMPRLRRSNRFAESNSS

>gi568815581f:29149141_29354346|GENSCAN_predicted_CDS_6|843_bp
atggtgtatagcatgagaagctccaaaacaggaattcagaaggagaaaaatcacaacagt
ggagggaaggcagcagacaaagaggatgctgtggttggctggtcagcctggaggcaaggc
cagggagtcaaagccatccacaaaattccactgagcatctatgctgcttggcgtgtagcc
ctggtgtccagaagcccaagaaacccttccaaccaccaagatggctcagaccaaccctac
gccggggtccctggggccatggaagctctcttgcgccattcaatctcatttcagataacc
atctatgatcaggagaactttcagggcaagaggatggagttcaccagctcctgtccaaat
gtctctgagcgcagttttgataatgtccggtccctgaaggtggaaagtggcgcctggatt
ggttatgagcataccagcttctgtgggcaacagtttatcctggagagaggagaataccct
cgctgggatgcctggagtgggagtaatgcctaccacattgagcgtctcatgtccttccgc
cccatctgttcagctaatcataaggagtctaagatgaccatctttgagaaggaaaacttt
attggacgccagtgggagatctctgacgactacccctccttgcaagccatgggctggttc
aacaacgaagtcggctccatgaagatacaaactgggtttgctaccaatatcctggatatc
gtgggtatcagtatatcttggaatgtgaccatcatggaggagactataaacattggagag
agtggggctctcatgcccagacttcgcagatccaatcgattcgccgaatccaacagtagc
tga

>gi568815581f:29149141_29354346|GENSCAN_predicted_peptide_7|702_aa
MEKLPVKSHEELSSSVQHLMGLKTKSYQQPWQQQQQPHHHHHYYFYNHSHNHHHHHHHQQ
PHQYLQHGAEGSPKAQPKPLKHEQKHTLQQHQETPKKKTGYGELNGNAGEREISLKNLSS
DEATNPISRVLNGNQQVVDTSLKQTVKANTFGKAGIKTKNFIQKNSMDKKNGKSYENKSG
ENQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKG
CENLNIVQDKIMQQETSVPTLKQGLETFKPDYSEQKGNRVDGSKPIWKYETGPGGTSRGK
PAVGDMLRKSSDSKPGVSSKKFDDRPKGKHASAVASKEDSWTLFKPPPVFPVDNSSAKIV
PKISYASKVKENLNKTIQNSSVSPTSSSSSSSSTGETQTQSSSRLSQVPMSALKSVTSAN
FSNGPVLAGTDGNVYPPGGQPLLTTAANTLTPISSGTDSVLQDMSLTSAAVEQIKTSLFI
YPSNMQTMLLSTAQVDLPSQTDQQNLGDIFQNQWGLSFINEPSAGPETVTGKSSEHKVME
VTFQGEYPATLVSQGAEIIPSGTEHPVFPKAYELEKRTSPQVLGSILKSGTTSESGALSL
EPSHIGDLQKADTSSQGALVFLSKDYEIESQNPLASPTNTLLGSAKEQRYQRGLERNDSW
GSFDLRAAIVYHTKEMESIWNLQKQDPKRIITYNEAMDSPDQ

>gi568815581f:29149141_29354346|GENSCAN_predicted_CDS_7|2109_bp
atggagaaacttccagtgaaaagtcatgaggaactgagttcttcagtccaacacctcatg
gggttgaaaactaagtcctaccaacaaccatggcagcagcagcagcagccgcaccaccac
caccattattatttctacaaccacagccacaaccaccaccaccaccatcatcaccagcag
cctcaccaatacctgcagcatggagccgagggcagccccaaggcccagccaaagccgctg
aaacatgagcagaaacacaccctccagcagcaccaggaaacgccgaagaagaaaacaggc
tatggtgaactaaacggtaatgctggagaaagagaaatatctttaaagaacctgagttct
gatgaagccaccaaccctatttccagggtcctcaatggcaaccagcaagttgtagacact
agcctgaagcagactgtaaaggccaacacctttgggaaagcaggaattaaaaccaagaat
ttcattcagaaaaacagtatggacaaaaagaatgggaagtcttatgaaaataaatctgga
gagaatcagtctgtagataagtctgatactataccaattccaaatggtgtggtaacaaat
aattctggttatattactaatggttatatgggtaaaggagcagataatgatggtagtgga
tctgagagcggatatacaactcctaaaaaaaggaaagctaggcgcaatagtgccaagggt
tgtgaaaaccttaatatagtgcaggacaaaataatgcaacaagagaccagtgtcccaacc
ttaaaacagggacttgaaactttcaagcctgactatagtgaacaaaagggaaatcgagta
gatggttcgaagcccatttggaagtatgaaactgggcctggaggaacaagtcgaggaaaa
cctgctgtgggtgatatgcttcggaaaagctcagatagtaaacctggtgtgagcagcaaa
aagtttgatgatcggcccaaaggaaagcatgcttcagctgttgcctccaaagaggactcg
tggaccctatttaaaccacccccagtttttccagtggacaatagcagtgctaaaatagtt
cctaaaataagttatgcaagcaaagttaaggaaaacctcaacaaaactatacagaactct
tctgtgtcaccaacttcatcttcatcatcttcatcatctaccggggaaactcagacccaa
tcatcaagtcgcttatcccaggtccctatgtcagcgctgaaatctgttacttctgccaac
ttttctaatgggcctgttttagcagggactgatggaaatgtttatcctccagggggtcag
ccactgctaactactgctgctaatactctaacacccatctcttctgggacagattcagtt
ctccaggacatgagtctaacttcagcagctgttgaacaaattaagactagcctttttatc
tatccttcaaatatgcaaactatgctgttgagcacagcacaagtggatctgccctctcag
acagatcagcaaaacctgggggatatcttccagaatcagtggggtttatcatttataaat
gagcccagtgctggccctgagactgttactgggaagtcatcagagcataaagtgatggag
gtgacatttcaaggagaatatcctgctactttggtttcacagggtgctgaaataattccc
tcaggaactgagcatcctgtgtttcccaaggcttacgagctggagaaacggactagtcct
caagttctgggtagcattctaaaatctgggactactagtgagagtggagccttatccttg
gaacccagtcatataggtgacctgcagaaagcagacaccagtagtcaaggtgctttagtg
tttctctcaaaggactacgagatagaaagtcaaaatcctctggcctctcctacgaacact
ttgttaggctctgccaaagaacagagataccagagaggcctagaaaggaatgatagctgg
ggttcttttgacctgagggctgctattgtatatcacactaaagaaatggaatctatttgg
aatttgcagaagcaagatcccaaaaggataatcacttacaatgaagccatggatagtcca
gatcaatga

>gi568815581f:29149141_29354346|GENSCAN_predicted_peptide_8|53_aa
MNVRVKISDLISHNQGNTMMMLEKGPNPDPKRGVLGSHAERNSRQVTECSKKR

>gi568815581f:29149141_29354346|GENSCAN_predicted_CDS_8|162_bp
atgaatgtgagagtcaagatttctgatctaatcagccacaaccagggtaacacaatgatg
atgctggaaaaaggtcccaacccagaccctaaaagaggggttcttggatctcatgcagaa
aggaattcaaggcaagtcacagagtgcagcaagaagagataa