GENSCAN 1.0	Date run:  5-Nov-116	Time: 19:45:08

Sequence gi568815581f:19433940_19677550 : 243611 bp : 45.71% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1066   1061    6                               1.05
 1.02 Term -  12645  12031  615  0  0   40   46   851 0.987  70.56
 1.01 Init -  12913  12707  207  1  0   56  -19   221 0.568   7.04
 1.00 Prom -  32194  32155   40                              -2.46

 2.04 PlyA -  32959  32954    6                               1.05
 2.03 Term -  33468  33401   68  1  2   85   40    70 0.665  -0.00
 2.02 Intr -  37167  36884  284  2  2   65   89   238 0.384  18.66
 2.01 Init -  49844  49795   50  2  2  102   21    31 0.179  -1.78
 2.00 Prom -  50866  50827   40                              -0.56

 3.00 Prom +  58468  58507   40                              -0.46
 3.01 Sngl +  63315  63590  276  2  0   29   32   256 0.305   9.48
 3.02 PlyA +  63647  63652    6                               1.05

 4.04 PlyA -  64292  64287    6                               1.05
 4.03 Term -  66189  66128   62  1  2   98   36    42 0.306  -2.03
 4.02 Intr -  70161  70123   39  1  0  100   94    23 0.298   2.30
 4.01 Init -  73449  73365   85  0  1   53   33   163 0.436   6.28
 4.00 Prom -  77588  77549   40                              -5.56

 5.00 Prom +  79682  79721   40                              -3.96
 5.01 Init +  91753  91758    6  0  0   82   89     4 0.139   0.64
 5.02 Intr +  99989 100372  384  1  0   63   80   275 0.602  19.25
 5.03 Intr + 108454 108555  102  0  0  104   88   144 0.984  16.37
 5.04 Intr + 110523 110736  214  2  1   76   59   131 0.900   7.29
 5.05 Intr + 112470 112564   95  1  2   77   99    36 0.885   3.28
 5.06 Intr + 114046 114194  149  0  2   79  110   152 0.958  15.53
 5.07 Intr + 121654 121751   98  1  2   59   80    19 0.218  -2.15
 5.08 Intr + 121857 121970  114  1  0   79   14    86 0.118   0.72
 5.09 Intr + 122056 122123   68  2  2   42  103   133 0.187   8.82
 5.10 Intr + 126249 126357  109  2  1   98   53    85 0.994   5.86
 5.11 Intr + 126479 126554   76  0  1   95  117    46 0.992   6.77
 5.12 Intr + 132851 132920   70  2  1  108   87    47 0.996   5.78
 5.13 Intr + 133157 133289  133  1  1   87   94    78 0.982   8.52
 5.14 Intr + 143388 143575  188  1  2  103   44   135 0.013  10.01
 5.15 Intr + 146066 146173  108  1  0   19   89   115 0.001   5.18
 5.16 Intr + 146295 146396  102  2  0   92   76    90 0.001   8.57
 5.17 Intr + 152652 152753  102  2  0   78   94    49 0.012   4.87
 5.18 Intr + 154520 154667  148  1  1   35   94   132 0.776   8.31
 5.19 Intr + 160271 160384  114  0  0  122   72    91 0.979  11.32
 5.20 Intr + 161919 161986   68  1  2   58   95   119 0.924   8.22
 5.21 Intr + 164159 164213   55  1  1   44   97    61 0.403   1.15
 5.22 Intr + 168372 168571  200  1  2   70   44   101 0.903   2.97
 5.23 Intr + 181849 181957  109  0  1  109  105    84 0.927  12.06
 5.24 Intr + 187620 187744  125  1  2   49   36    70 0.448  -1.80
 5.25 Intr + 191902 192034  133  0  1   84   77    61 0.839   4.82
 5.26 Term + 193596 193690   95  1  2   85   49    69 0.677   0.69
 5.27 PlyA + 198785 198790    6                               1.05

 6.00 Prom + 212206 212245   40                              -1.06
 6.01 Init + 214606 214767  162  0  0   85   18   200 0.779  10.44
 6.02 Intr + 215024 215185  162  1  0   56  107   352 0.822  34.07
 6.03 Intr + 217608 217839  232  2  1   47   41   183 0.224   6.85
 6.04 Intr + 218608 218693   86  2  2   64  110    30 0.164   2.34
 6.05 Intr + 222427 222635  209  0  2   -7  109   145 0.838   4.98
 6.06 Intr + 223806 223923  118  0  1   73   76    28 0.962   0.57
 6.07 Intr + 227188 227329  142  0  1   86   63   122 0.998   9.43
 6.08 Intr + 229394 229560  167  0  2   92  121    85 0.993  11.88
 6.09 Intr + 231009 231108  100  2  1   91   92   138 0.986  14.18
 6.10 Term + 241619 241686   68  0  2  126   36     6 0.101  -2.70
 6.11 PlyA + 241786 241791    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 146416 146193  224  2  2   89   41   222 0.976  15.45
S.002 Init + 152601 152753  153  2  0   63   94   115 0.956   9.59


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:19433940_19677550|GENSCAN_predicted_peptide_1|273_aa
MADDAGAAGGPGGPGGPEMGNRGGFRGGFGSGIRGQGRGRGRGRGQGRGARGGKAEDKEW
MPVTKLGRLESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLG
VKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGCCGSVLVRLIPAPR
GTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFTKATFDAISKTYSYLTPDLWKETV
FTKSPYQEFTDHLVKTHTRVSVQRTQAPAVATT

>gi568815581f:19433940_19677550|GENSCAN_predicted_CDS_1|822_bp
atggcggatgacgccggtgcagcgggggggcccggaggccctggtggccctgagatgggg
aaccgcggtggcttccgcggaggtttcggcagtggcatccggggccagggtcgcggccgt
ggacggggccggggccaaggccgcggagctcgcggaggcaaggccgaggataaggagtgg
atgcccgtcaccaagttgggccgcttggaatcagagatcattgatttcttcctgggggcc
tctctcaaggatgaggttttgaagattatgccagtgcagaagcagacccgtgccggccag
cgcaccaggttcaaggcatttgttgctatcggggactacaacggccacgtcggtctgggt
gttaagtgctccaaggaggtggccaccgccatccgtggggccatcatcctggccaagctc
tccatcgtccccgtgcgcagaggctactgggggaacaagatcggcaagccccacactgtc
ccttgcaaggtgacaggctgctgcggctctgtgctggtacgcctcatccctgcacccagg
ggcactggcatcgtctccgcacctgtgcctaagaagctgctcatgatggctggtatcgat
gactgctacacctcagcccggggctgcactgccaccctgggcaacttcaccaaggccacc
tttgatgccatttctaagacctacagctacctaacccccgacctctggaaggagactgta
tttaccaagtctccctatcaggaattcactgaccacctcgtcaagacccacaccagagtc
tccgtgcagcggactcaggctccagctgtggctacaacatag

>gi568815581f:19433940_19677550|GENSCAN_predicted_peptide_2|133_aa
MTHDTAPGGPENMYPSCVLWLGGRSSFGSVLLMSLKASARGVKAWGQRLQDSKHCECSVA
QLGVGLCDGKKHPKVDVARDGRSHRRGGKDSDRVPRERRVLVIREFSPHDCDPSAQGIMH
GWGASALEEQFRD

>gi568815581f:19433940_19677550|GENSCAN_predicted_CDS_2|402_bp
atgacccatgatacagccccaggaggccctgagaacatgtacccaagttgtgttctctgg
ctgggtgggcggagctcctttggctcggtcctgctgatgtccttaaaggcctcagcccgt
ggagtcaaagcctggggccagcggctgcaggattctaaacactgtgagtgctcagttgcg
cagctgggtgtgggactgtgtgacggcaagaagcatccaaaggtggacgtggccagggat
gggaggagccatcggagaggtggtaaggacagcgaccgagttccccgagagaggcgagtc
ttagtaattcgggaattcagcccccacgactgtgacccttctgctcagggcatcatgcac
ggctggggggcctcagccctagaggagcagttcagagattaa

>gi568815581f:19433940_19677550|GENSCAN_predicted_peptide_3|91_aa
MLKNAESNGELKGLDVDSLVIEHIQVNKAPKICHWTYRAYGRINPYVSSLCHTEMILTEK
EQIVPKPEEEVAQKKKISQKKLKKQKLMARE

>gi568815581f:19433940_19677550|GENSCAN_predicted_CDS_3|276_bp
atgctaaaaaatgcagagagtaatggtgaacttaagggtttagatgtagattctctggtc
attgagcatatccaagtgaacaaagcaccgaagatatgccactggacctacagggcttat
ggtcggattaacccatacgtgagctctctctgccacactgagatgatccttactgaaaag
gaacagattgttcctaaaccagaagaggaggttgcccagaagaaaaagatatcccagaag
aaactgaagaaacaaaaacttatggcacgggagtaa

>gi568815581f:19433940_19677550|GENSCAN_predicted_peptide_4|61_aa
MAARGTRGRGARGSGLLLSPLLSGDKRGGYGTKHCLVFYDRGFCDLLGFGFSEDVVQFKP
M

>gi568815581f:19433940_19677550|GENSCAN_predicted_CDS_4|186_bp
atggcggcgcgggggacgcgggggcgcggggctcggggctcggggctgctcctttctcct
ctcctctcaggggacaagcgcgggggatatggaaccaagcactgtcttgtgttctatgac
agaggcttctgtgacctattaggctttggtttttccgaagatgtggttcagttcaaaccc
atgtaa

>gi568815581f:19433940_19677550|GENSCAN_predicted_peptide_5|1054_aa
MVRASHMEAPEEPAPVRGGPEATLEVRGSRCLRLSAFREELRALLVLAGPAVSKVASVAG
RYRRAGDLVISASAGDFGGLWGPSELSAGGLRGASCQEPGGHPSSSACVPAAFRSAPPDW
GPRGALRERLFLVQLMVFLISFISSVFCGHLGKLELDAVTLAIAVPCCRVKWRYQVPDGE
HIRHPVIPLPGLGGTALGSSKLQGLLLTLVKASTPGKPLALVRTSDRLCTPSAPQGPYLW
VYLQVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALVLLLCCFPCWALFL
NTQHILLLFRQDPDVSRGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLECLQDWA
SFLRLAIPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSIVYELAIIVYMVPAGFSVAAS
VRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQ
VVPIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIALMFATTLGVMG
CPENLEGILTNDVGKTGEPQSDQQMRQEEPLPEHPQDGAKLSRKQLVLRRGLLLLGVFLI
LLRLRALGWRDGLWGLRGALPPDLRGEAAELAALAGPVFLAQLMIFIISLVSSIFCGHLG
KVEPDAVTLAVTVCHTRSVVLLQVVNVTGIAVGTGLASAYDTLMSQSFGVKNLKRVGIIL
QRGVLILMLCCFPCWADLVNTERILLLLKQDPKSPGWTRECFQEWGSYIHLVIPSMFMVC
TEQWTFEIGNFLAGLIDVMELGTQGIICELASVAYMNYFRLNPQPPISDFTINLAFLTLT
ERKILGYIQLRKGPDIVGPYGLLQPFTDAVKLHQRTLMALNIYYYPLYYCSNPGPFYHCP
LVPLGLGVAASIRVGNALGEGNVEEAWCSCTTVLLCAAIPTKLFGEFIVYPLYQAAAAKT
FARIRFQQTSLNINFSTGQGACGGVLRGTGKQNIGAILNAIGYYVFGFPIGVSLMFATKL
RIIDTATIRFLNLFPAFPAFLFHKAAIVILARSQ

>gi568815581f:19433940_19677550|GENSCAN_predicted_CDS_5|3165_bp
atggtgcgcgcgagtcacatggaagctcctgaggagcccgcgccagtgcgcggaggcccg
gaggccacccttgaggtccgtgggtcgcgctgcttgcggctgtccgccttccgagaagag
ctgcgggcgctcttggtcctggctggccccgcggtgagtaaggtggcctcagtggcaggc
cggtaccggcgggctggggacctggtgatttctgcctccgcgggtgactttggcgggctt
tggggaccgagcgagctgtccgccggcgggctccggggagcatcgtgccaggagccgggc
gggcaccccagctcctctgcctgcgtcccggccgctttccgctccgcaccacccgactgg
gggccccgcggggcactgcgggaacggctgttcttggttcagctgatggtgttcctgatc
agcttcataagctccgtgttctgtggccacctgggcaagctggagctggatgcagtcacg
ctggcaatcgcggttccctgctgtagagtcaagtggaggtaccaggttccagatggggag
cacatcagacatcctgtgataccactccctggtttggggggcactgctctaggctcctcg
aaacttcagggtttgctgctgaccctggtgaaggcgagcacacctggaaagcctctggca
ctagtccggacttcagaccgcctctgcactcccagtgccccccaggggccttatctttgg
gtttatttgcaggttatcaatgtcactggtgtctcagtgggattcggcttatcttctgcc
tgtgacaccctcatctcccagacgtacgggagccagaacctgaagcacgtgggcgtgatc
ctgcagcggagtgcgctcgtcctgctcctctgctgcttcccctgctgggcgctctttctc
aacacccagcacatcctgctgctcttcaggcaggacccagatgtgtccagaggctctgca
ctggcaaacttgatttcccagtacaccctggctctactcctctttctctacatcctcggg
aaaaaactgcatcaagctacatggggaggctggtccctcgagtgcctgcaggactgggcc
tccttcctccgcctggccatccccagcatgctcatgctgtgcatggagtggtgggcctat
gaggtcgggagcttcctcagtggcatcctcggcatggtggagctgggcgctcagtccatc
gtgtatgaactggccatcattgtgtacatggtccctgcaggcttcagtgtggctgccagt
gtccgggtaggaaacgctctgggtgctggagacatggagcaggcacggaagtcctctacc
gtttccctgctgattacagtgctctttgctgtagccttcagtgtcctgctgttaagctgt
aaggatcacgtggggtacatttttactaccgaccgagacatcattaatctggtggctcag
gtggttccaatttatgctgtttcccacctctttgaagctcttgcttgcacgagtggtggt
gttctgagggggagtggaaatcagaaggttggagccattgtgaataccattgggtactat
gtggttggcctccccatcgggatcgcgctgatgtttgcaaccacacttggagtgatgggg
tgccctgaaaaccttgaaggaattttaacgaacgatgttggaaagacaggcgagcctcag
tcagatcagcagatgcgccaagaagaacctttgccggaacatccacaggacggcgctaaa
ttgtccaggaaacagctggtgctgcggcgagggcttctgctcctgggggtcttcttaatc
ttgctgcggctccgggccctcggatggcgtgacggcttgtggggcctgcggggtgcgctg
cccccggacctgcggggggaggcggctgagctggcggcgctcgcgggcccagtgtttctt
gcgcagttgatgatctttataatcagcctcgtcagctccatcttctgtggacatctgggc
aaggtcgagccggacgctgtcacgctcgccgtcacggtctgccacaccaggtctgtggtt
ctcttgcaggtggtgaacgttactgggattgcagttggcactggcttagcctcagcttat
gacaccctcatgtctcagtcctttggagtcaagaacctcaagcgcgtggggatcatactt
cagagaggggtcctcatccttatgctgtgctgctttccctgctgggccgacttggtcaac
accgagcgcatcctcctgctcttaaaacaagacccgaagtctccaggttggacgagggag
tgcttccaggagtggggctcctacatccacctggttattcccagtatgttcatggtgtgc
actgagcagtggacctttgagatcggaaacttccttgcaggactgattgatgtgatggag
ctcggcactcagggcatcatctgtgagctggcgtcagtggcctacatgaactatttccga
ttaaatccgcaaccccccatctctgactttaccatcaacctagcattccttacactcact
gaacggaaaatcttaggctatatacaactacgcaaaggacctgacattgtaggtccctat
ggactgcttcaaccattcactgatgcagtaaaacttcaccaaagaacccttatggccctc
aacatctactattaccctttatattattgctccaaccctggccctttctatcattgtcct
cttgtacccctgggccttggagttgcagccagcatccgagtgggcaatgctctgggggaa
gggaatgtagaggaggcttggtgctcctgcaccacagttctcctgtgtgctgccattcct
actaagctttttggtgagtttattgtgtatcccttgtatcaggcagcagcagctaaaaca
tttgcccgtatacgttttcaacaaacatccctcaacatcaactttagcactgggcagggc
gcctgtggtggagtcctgagaggtacaggaaaacaaaacattggcgctatcttgaatgcc
attgggtactatgtctttggttttcccattggagtatctctgatgtttgccactaaactc
aggataatagacacggcaaccatccgatttctcaatcttttccccgcctttcccgccttt
ctattccacaaagccgccattgtcatcctggcccgttctcaatga

>gi568815581f:19433940_19677550|GENSCAN_predicted_peptide_6|481_aa
MANTFPPSLHPAAPWPVAALGSRTAHSTPYIPARCQSRGEGGGRVGEAVNSGCHDQAMEL
EVRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILTAIAADLCKSEFNVYSQEVIT
VLGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQPLI
GAIAAGNAVIIKPSELSENTAKILAKLLPQYLDQDLYIVINGGVEETTELLKQRFDHIFY
TGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKYMNCGQTCIA
PDYILCEASLQNQIVWKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKIAFG
GETDEATRYIAPTVLTDVDPKTKVMQEEIFGPILPIVPVKNVDEAINFINEREKPLALYV
FSHNHKLIKRMIDETSSGGVTGNDVIMHFTLNSFPFGGVGRILLKNDPVQPPSASTELFL
F

>gi568815581f:19433940_19677550|GENSCAN_predicted_CDS_6|1446_bp
atggccaacaccttccctccatccctacaccccgccgccccctggcccgtggccgcgctc
ggctcccgcactgctcactccaccccctacatcccagcccgctgccagagccggggagag
ggcgggggccgcgtgggcgaggccgtgaacagcggctgtcacgaccaggccatggagctc
gaagtccggcgggtccgacaggcgttcctgtccggccggtcgcgacctctgcggtttcgg
ctgcagcagctggaggccctgcggaggatggtgcaggagcgcgagaaggatatcctgacg
gccatcgccgccgacctgtgcaagagtgaattcaatgtgtacagtcaggaagtcattact
gtccttggggaaattgattttatgcttgagaatcttcctgaatgggttactgctaaacca
gttaagaagaacgtgctcaccatgctggatgaggcctatattcagccacagcctctggga
gtggtgctgataatcggagcttggaattaccccttcgttctcaccattcagccactgata
ggagccatcgctgcaggaaatgctgtgattataaagccttctgaactgagtgaaaataca
gccaagatcttggcaaagcttctccctcagtatttagaccaggatctctatattgttatt
aatggtggtgttgaggaaaccacggagctcctgaagcagcgatttgaccacattttctat
acgggaaacactgcggttggcaaaattgtcatggaagctgctgccaagcatctgacccct
gtgactcttgaactgggagggaaaagtccatgttatattgataaagattgtgacctggac
attgtttgcagacgcataacctggggaaaatacatgaattgtggccaaacctgcattgca
cccgactatattctctgtgaagcatccctccaaaatcaaattgtatggaagattaaggaa
acagtgaaggaattttatggagaaaatataaaagagtctcctgattatgaaaggatcatc
aatcttcgtcattttaagaggatactaagtttgcttgaaggacaaaagatagcttttggt
ggggagactgatgaggccacacgctacatagccccaacagtacttaccgatgttgatcct
aaaaccaaggtgatgcaagaagaaatttttggaccaattcttccaatagtgcctgtgaaa
aatgtagatgaggccataaatttcataaatgaacgtgaaaagcctctggctctttatgta
ttttcgcataaccataagctcatcaaacggatgattgatgagacatccagtggaggtgtc
acaggcaatgacgtcattatgcacttcacgctcaactctttcccatttggaggagtgggc
agaatattactgaagaatgatcctgttcaacctcctagtgcctctactgaattattcctc
ttttaa