GENSCAN 1.0	Date run:  6-Nov-116	Time: 14:04:04

Sequence gi568815582r:84466848_84717914 : 251067 bp : 48.84% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -   2040   2035    6                               1.05
 1.07 Term -  13179  13066  114  0  0   91   55   182 0.999  13.77
 1.06 Intr -  13861  13682  180  1  0  123   97   154 0.996  19.86
 1.05 Intr -  15863  15745  119  0  2   88   93   153 0.936  15.98
 1.04 Intr -  20212  19784  429  2  0  129  116   456 0.658  46.19
 1.03 Intr -  22575  22425  151  0  1   38   27   120 0.288   0.64
 1.02 Intr -  29066  28836  231  2  0  106   67   179 0.747  15.57
 1.01 Init -  29325  29287   39  0  0   69   60    44 0.314  -0.32
 1.00 Prom -  31143  31104   40                              -8.46

 2.00 Prom +  32887  32926   40                              -3.26
 2.01 Init +  37916  38024  109  1  1   39   28   135 0.114   0.98
 2.02 Intr +  38368  38556  189  2  0   88   69    81 0.826   5.76
 2.03 Intr +  39221  39321  101  0  2   22   89    41 0.110  -2.57
 2.04 Intr +  48266  48368  103  1  1   92   47   103 0.520   6.35
 2.05 Intr +  53313  53374   62  1  2   69   42    82 0.041   0.15
 2.06 Intr +  60046  60153  108  0  0  104   65    24 0.232   2.18
 2.07 Intr +  60496  60518   23  0  2   44   96    44 0.123  -2.86
 2.08 Intr +  61647  61799  153  0  0   33   84   111 0.217   4.39
 2.09 Intr +  67639  67743  105  1  0   46   80    62 0.308   0.53
 2.10 Intr +  71242  71347  106  1  1   95   51    63 0.612   3.52
 2.11 Intr +  72557  72635   79  1  1   92   80    72 0.189   5.92
 2.12 Intr +  86808  86940  133  1  1  107   59    33 0.672   2.00
 2.13 Intr +  89079  89308  230  0  2  114   89    63 0.398   6.51
 2.14 Term +  91569  91639   71  1  2  131   55    17 0.325   0.80
 2.15 PlyA +  95502  95507    6                               1.05

 3.12 PlyA -  98777  98772    6                               1.05
 3.11 Term - 100108  99998  111  1  0  102   40   214 0.456  16.56
 3.10 Intr - 113218 113136   83  2  2   63   50    78 0.276   0.86
 3.09 Intr - 117242 117215   28  2  1  115   32    44 0.240  -0.81
 3.08 Intr - 123415 123258  158  2  2   82   84   322 0.753  30.93
 3.07 Intr - 140469 140183  287  2  2  115   57   182 0.210  14.79
 3.06 Intr - 141534 141500   35  0  2   43  119    11 0.083  -3.28
 3.05 Intr - 147374 147310   65  0  2  105   75    44 0.097   3.24
 3.04 Intr - 148255 148161   95  0  2   48   79   107 0.555   5.41
 3.03 Intr - 149765 149726   40  0  1   66   21    66 0.437  -5.02
 3.02 Intr - 150736 150654   83  0  2   50   91   123 0.946   8.08
 3.01 Init - 151067 150991   77  2  2  103   62   216 0.701  21.06
 3.00 Prom - 161625 161586   40                              -1.06

 4.00 Prom + 175777 175816   40                              -1.46
 4.01 Init + 176091 176155   65  2  2   72   71    49 0.539   0.95
 4.02 Intr + 176585 176633   49  2  1  104   69    25 0.474   0.88
 4.03 Intr + 182041 182219  179  0  2   55   36   200 0.982  10.22
 4.04 Intr + 184005 184083   79  0  1  101   66    27 0.972   1.35
 4.05 Intr + 190024 191097 1074  0  0  107  100  2580 0.997 251.50
 4.06 Intr + 192913 193070  158  0  2   23   53   232 0.689  12.01
 4.07 Term + 194731 195286  556  1  1  122   46  1237 0.999 116.70
 4.08 PlyA + 198184 198189    6                               1.05

 5.03 PlyA - 198691 198686    6                               1.05
 5.02 Term - 199137 199049   89  1  2   70   49   103 0.527   2.42
 5.01 Init - 201369 201339   31  0  1   50   94    62 0.540   2.91
 5.00 Prom - 224527 224488   40                              -2.86

 6.00 Prom + 225913 225952   40                              -5.36
 6.01 Init + 233039 233199  161  1  2   42   49   227 0.280  11.50
 6.02 Intr + 245381 245556  176  2  2   93   60     0 0.009  -2.72
 6.03 Intr + 246588 246664   77  1  2  114   75     9 0.147   1.43
 6.04 Term + 249348 249422   75  2  0  139   38    38 0.453   1.74
 6.05 PlyA + 249841 249846    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 147374 147205  170  0  2  105   36    85 0.832   3.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:84466848_84717914|GENSCAN_predicted_peptide_1|420_aa
MWGKGKKAMGITLNHVGEALPPEMVTRLYDGMRRVDLTGKAKGPSENVSQEQFTASMSHL
LKGNSEEKSLMIMKMISATEGPVKAREVQKFTEDLVGSVVHVLSHRQELRGWTGKEAPGP
NPRVQVLAAQLLSDMKLQGKYGKRLLGPQWLDYDCDRAVIEDWVFRVPHVAIFLSVVICK
GFLILCSSLDLTTLVPERQVDQGRGFESILDVLSVMYINAQLPREQRHRWCLLFSSELHG
HSFSQLCGHITHRGPCVAVLEDHDKHVFGGFASCSWEVKPQFQGDNRCFLFSICPSMAVY
THTGYNDHYMYLNHGQQTIPNGLGMGGQHNYFGLWVDVDFGKGHSRAKPTCTTYNSPQLS
AQENFQFDKMEVWAVGDPSEEQLAKGNKSILDADPEAQALLEISGHSRHSEGLREVPDDE

>gi568815582r:84466848_84717914|GENSCAN_predicted_CDS_1|1263_bp
atgtggggaaagggcaagaaagccatgggaatcaccttgaaccacgtcggggaagctctt
cccccagagatggtcaccaggctgtatgatggcatgcggagggtcgacctgacagggaag
gcgaagggacccagtgagaacgtgtcccaggagcagttcacagcatccatgtcccacctg
ttgaaaggaaactccgaggagaagagtctcatgattatgaaaatgatttctgccacagaa
ggtcccgtgaaggccagagaagtccaaaagtttacagaggatctggttggctctgtggtg
cacgtgctaagccacagacaggagctgagaggctggactgggaaggaagccccagggccc
aacccccgggtgcaggtgctggctgctcagctgctctctgacatgaagctgcaaggcaag
tatggcaagagacttctggggccccagtggctggactatgactgtgaccgagctgtgatc
gaggactgggtgttcagggtcccccatgtggccatattcctgagtgtggtcatttgcaag
ggctttctcatcctgtgctcgtctcttgatctgactaccctggtccctgagcgtcaagtg
gaccagggcaggggttttgagagcatcctggatgtcctctctgtcatgtacatcaacgcc
cagctgcctcgggagcagcggcaccgctggtgcctgctcttttcgtctgagctccatgga
cacagcttctcccagctctgtggccacatcactcaccggggaccctgtgtggctgtcctc
gaggaccatgacaagcatgtgttcggtgggtttgcctcttgctcttgggaggtgaagcct
cagtttcaaggggacaacagatgcttcctgttctccatctgccccagcatggctgtgtac
acacacacgggctacaacgaccactacatgtacttgaaccatggacagcagacgatcccg
aacggactgggtatgggggggcagcacaattactttgggctttgggtggatgttgatttt
gggaaaggacacagcagagccaagcccacgtgcaccacgtacaacagcccgcagctgtcg
gctcaggagaacttccagtttgataagatggaggtgtgggcggttggagacccctcagag
gagcagttggccaagggcaacaagagcatcctggatgcggaccctgaggcccaggccctg
ctggagatcagtgggcattcgcgccacagcgaagggctccgggaagtcccggacgatgaa
tga

>gi568815582r:84466848_84717914|GENSCAN_predicted_peptide_2|523_aa
MVTRLTGSEPNPVGAARGGAAVCGRSGCRPGNPARLRPSRQPSGASSTAWLNRLPPPHVR
LFSRFPFTPRRLNLSPHFFSSFLLKPTETWSRGPAHYIRARAPDAQDTRAFRHEGLDPVS
SLHTPVLPAHINQGLPYMVNRPSDNVQPGLVTEVLSFERGFARIFTEDLLPGGNRHEKLP
VDFPKVLEPRGPRLCCCLLSGSTSRANGLSRFRANPRQKAQIHPAATLTEAGGLVISAYG
FYKGHKGVTTVSVGYFSHLDTQTLDVHDFKEGTSVSAPPVLKPLQKAVNQEKATDTVNLD
VRWLARSLIISLTFNPVRAMSPMAPSRQPQGTDNLSAINVSQAFCRCHRGMRRSLVSFDC
SSLTVDVILRHSEYLLEYRGPQLRNLRWVEENEQFPSLHKHFRQKTTEHKVFDADETDGL
DGGLNVNPRLLDLQVCQEKLKARFLGETFASLNVSTQSKLRTGTSRRCCASHALHDSEDV
GFMFVPVWSAPYSKLHTAQPGLTSRFHCARCISARVDLLKTKV

>gi568815582r:84466848_84717914|GENSCAN_predicted_CDS_2|1572_bp
atggtgacgcgcctcacagggagtgagccgaacccggtgggtgcggctcggggcggggcc
gcggtctgcgggaggagcggctgcaggcccgggaatccggcccggctgcgtccttcccgg
cagccatcaggcgccagctccacagcctggctaaacagactccctccaccccacgtgcgc
ctcttcagccggttcccgttcactccaagacgtctgaacctgtcaccccacttcttcagc
tcgttccttctcaaacccaccgaaacctggtcccgggggcctgctcactacatccgagcc
agggctcctgatgcccaagacacacgggcctttagacatgaaggactagaccctgtttcc
agccttcacacccctgtacttcctgcacacatcaaccagggattgccttatatggtgaac
aggcccagtgacaacgtgcagccagggctggtgacggaagtcctcagtttcgaaagaggc
tttgcacggatctttacagaagacctgctccctggaggcaaccgccacgagaagcttccc
gtggattttcccaaagttctagagccacgtggaccccgcctctgctgctgccttttgtct
ggcagcaccagccgggctaacggtctaagcagatttcgtgcaaatccccgtcagaaagca
caaatccacccggcggccacgctcacggaagcaggggggcttgtgatttctgcctatggc
ttttataaaggtcataaaggggtcacaactgtttctgtgggttacttctctcacttggac
acccaaaccctcgatgttcatgacttcaaagagggaactagtgtttcagctcctcccgtg
ctgaaaccgctacaaaaggctgtcaaccaggaaaaggcaacagacacagtgaacctggat
gtcagatggctggcaaggtctctcattatttccttgacatttaatccagttagggctatg
tcccccatggctccttcacgccagccccaggggactgacaacctctcagccataaatgtc
agccaggccttctgccgatgccaccgggggatgcggaggtccttggtttcctttgactgc
agctccctgacagtagatgtgattctgcgacactcagaatacctcctggagtacagaggg
cctcagttaaggaacctaagatgggtagaggaaaatgaacaatttccttccctacataag
catttcaggcagaagacaactgaacacaaggtgttcgatgctgacgaaactgacgggttg
gatggagggctgaatgtaaacccaaggttactggatcttcaggtttgtcaagaaaagctg
aaagctagatttttaggtgaaacctttgcatctttaaatgttagcacccaatccaaactt
cggactgggacttccaggcgctgttgtgcaagtcatgccctgcacgactccgaggacgtc
ggtttcatgtttgttccagtgtggagtgctccctacagtaaactgcacactgcgcagcca
gggctcacctctcgttttcattgtgcccgatgcatctctgctcgggtggacctactcaaa
accaaggtctga

>gi568815582r:84466848_84717914|GENSCAN_predicted_peptide_3|353_aa
MATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTVGSKLSD
NGSTARRDNGLNTGTGWIAVTTLDVPYLGHTSEQPGVAAQFAWDGQRPCEGGEKCPVQIN
KMMKDDRCVSSWPVDSLPSACTVFICFAFLEDSYTPVKARCECSLCSDALLVFVVLVSRM
VVVCMSVSSTPWRSPPGERDFVPLVVVSLAGNPHPSWLDGCQSLSPMDDVRLFAFVRFTT
GDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQDCGDNAVTAGTCQQLASGRC
GAVIPDTVASTVYSRCANFAKEFVISDRKELEEDFIKSELKKAGGANYDAQTE

>gi568815582r:84466848_84717914|GENSCAN_predicted_CDS_3|1062_bp
atggccaccaagatcgacaaagaggcttgccgggcggcgtacaacctggtgcgcgacgac
ggctcggccgtcatctgggtgacttttaaatatgacggctccaccatcgtccccggcgag
cagggagcggagtaccagcacttcatccagcagtgcacagttggaagcaagctttcggac
aacggcagcacagcccggagggacaatggactcaacactggcactggctggatagcagtc
accacgctcgacgtgccttatcttggtcatacctcagaacagcctggtgtggcagctcag
ttcgcctgggatggtcagagaccttgcgagggcggtgagaaatgcccagtgcagattaat
aaaatgatgaaggatgatagatgtgtatcttcctggcctgtggactctcttccctctgcc
tgcactgtcttcatctgtttcgccttcctggaggactcctacacacccgtcaaggcccgg
tgtgaatgttccctctgctcggatgccctccttgtctttgtggtgttggtgtcccgtatg
gtggtcgtgtgcatgtctgtttcttcaactccttggcgaagtcctcctggagagagggac
tttgtccctttggtggtggtatccttggcggggaatccccatccttcatggttagatggc
tgccaatctctttcccccatggatgacgtccggttgtttgccttcgtgcgcttcaccacc
ggggatgccatgagcaagaggtccaagtttgccctcatcacgtggatcggtgagaacgtc
agcgggctgcagcgcgccaaaaccgggacggacaagaccctggtgaaggaggtcgtacag
gattgtggggacaatgcagtgaccgctggcacctgccagcagctggcctccggacgctgt
ggtgcagtgattcccgacacagtcgctagcacggtatacagtcgctgtgccaatttcgct
aaggagtttgtgatcagtgatcggaaggagctggaggaagatttcatcaagagcgagctg
aagaaggcggggggagccaattacgacgcccagacggagtaa

>gi568815582r:84466848_84717914|GENSCAN_predicted_peptide_4|719_aa
MEKLRHNGAKLLAQFTQLGVARRLGLGNTQQGKLLQQQVSGPRPGPSRLRLLAAGWSLLG
GRCAEFRLGCGVRANDSGVPGDPAGEPVSAASLSPTLRAEISLMMEGSRQTRVSRPYKIS
ESSKVYRWADHSSTVLQRLNEQRLRGLFCDVVLVADEQRVPAHRNLLAVCSDYFNSMFTI
GMREAFQKEVELIGASYIGLKAVVDFLYGGELVLDGGNIDYVLETAHLLQIWTVVDFCCE
YLEQEVSEDNYLYLQELASIYSLKRLDAFIDGFILNHFGTLSFTPDFLQNVSMQKLCVYL
SSSEVQRECEHDLLQAALQWLTQQPEREAHARQVLENIHFPLIPKNDLLHRVKPAVCSLL
PKEANCEGFIEEAVRYHNNLAAQPVMQTKRTALRTNQERLLFVGGEVSERCLELSDDTCY
LDAKSEQWVKETPLPARRSHHCVAVLGGFIFIAGGSFSRDNGGDAASNLLYRYDPRCKQW
IKVASMNQRRVDFYLASIEDMLVAIGGRNENGALSSVETYSPKTDSWSYVAGLPRFTYGH
AGTIYKDFVYISGGHDYQIGPYRKNLLCYDHRTDVWEERRPMTTARGWHSMCSLGDSIYS
IGGSDDNIESMERFDVLGVEAYSPQCNQWTRVAPLLHANSESGVAVWEGRIYILGGYSWE
NTAFSKTVQVYDREADKWSRGVDLPKAIAGGSACVCALEPRPEDKKKKGKGKRHQDRGQ

>gi568815582r:84466848_84717914|GENSCAN_predicted_CDS_4|2160_bp
atggagaaactgaggcacaacggagctaagttgctggcccagttcacacagctgggagta
gccaggagactcggacttggaaacacccagcagggaaaattgctgcagcagcaggtgagt
ggcccccgccccgggccgtcccgactccgcctcctcgccgccggctggagcctgctgggc
ggccgttgcgctgagttccgcctgggctgcggggtccgagcgaacgacagcggcgtcccc
ggagaccccgccggcgagccggtgtcagcagcgtcgctttctccaacgctgagggctgaa
atctctttaatgatggagggaagcaggcagacgcgagtgtctcggccatacaagatcagc
gaatcatcaaaggtataccgctgggccgaccactcaagcacggtgctgcagcggctgaac
gagcagcgtctccgcgggctcttctgcgacgtcgtcctggtggccgatgagcagcgtgtg
ccagcccatcgcaacctgctggccgtgtgcagcgactacttcaactccatgttcaccatc
ggcatgcgggaagctttccagaaggaggtggagctgatcggcgcctcctacattgggctc
aaggccgtggtggacttcctgtacggcggggagctggtgctggatggcggcaacattgac
tacgtcctggagacggctcacctgctgcagatctggacggtggtagacttctgctgtgag
tacctggagcaggaggtgagcgaggacaactacctgtacctgcaggagctggcctccatc
tacagcctcaagcggcttgatgccttcatcgatggcttcatcctgaaccacttcggcacg
ctgtcctttacgcccgacttcctgcagaacgtctccatgcagaagctgtgtgtctacctg
agcagcagcgaggtgcagcgggagtgtgagcacgacctcctgcaggccgccctgcagtgg
ctgacgcagcagcccgagcgcgaggcccacgcccgccaggtgctggagaacatccacttc
ccgctcatccccaagaacgacctgctgcaccgcgtcaagccggccgtgtgctcgctgctg
cccaaggaggccaactgcgagggcttcatcgaggaggccgtgcgctaccacaacaacctg
gcggcccagcccgtcatgcagaccaagcgcacggcgctgcgcaccaaccaggagcgcctg
ctgtttgtgggcggcgaggtctccgagcggtgtctggagctcagtgacgacacctgctac
ctggacgccaagagcgagcagtgggtcaaagagacgccgctgcccgcccggcggagccac
cactgtgtcgcggtgctggggggcttcatcttcatcgccggcggcagcttctcacgggac
aacggaggggatgcggcctccaatcttctttataggtatgacccccgctgtaaacagtgg
atcaaggtggcctccatgaaccagcgccgtgtggatttctaccttgcctccatcgaagac
atgctggtggccatcggcggccggaatgagaacggagcgctctcttcagtagagacgtac
agtcccaagactgactcctggtcctatgtggccggcttgccaaggttcacgtacggccac
gcgggcaccatctacaaagacttcgtgtacatctcggggggccacgactaccaaattggc
ccctaccgcaagaacctgctatgctacgaccaccggacagacgtgtgggaggagcggcgg
cccatgaccacggcgcgcggctggcacagcatgtgcagcctgggtgacagcatctactcc
atcgggggcagcgatgacaacatcgagtccatggagcgcttcgacgtgctgggcgtggag
gcctacagcccgcagtgcaaccagtggacccgcgtggcgccgctgctgcacgccaacagc
gagtcgggcgtggcagtgtgggagggccgcatctacatcctgggcggctacagctgggag
aacactgccttctccaagaccgtgcaggtgtacgaccgcgaggccgacaagtggagcagg
ggcgtcgacctgcccaaggccatcgctggcgggtccgcctgtgtctgcgccctggagcca
cggccagaggacaagaagaagaaaggcaaaggcaagaggcaccaggaccggggccagtga

>gi568815582r:84466848_84717914|GENSCAN_predicted_peptide_5|39_aa
MLLKRMRKNPGLGPVDGVPTTGSDSHKAHEMLLHHGGPG

>gi568815582r:84466848_84717914|GENSCAN_predicted_CDS_5|120_bp
atgcttctgaagcggatgcgaaagaacccaggtttgggaccagtggacggggttccaacc
acgggctctgacagccacaaggcccatgagatgctgctgcaccatggaggaccagggtga

>gi568815582r:84466848_84717914|GENSCAN_predicted_peptide_6|162_aa
MSAARQAHAHLSAAQAQQRAGLPAPRGARPVRRRGGRCECVCAGEKMAAAGEAARQSAVY
RGPCGPVLRVAEGRHGSAWGDCALCRGQHHMDEPEAAAGLAALSGQEGFLESEHFTPNTL
HTRYPDVCVWFTLSSSPNICQFLLDSSDWKIVLSPWQIICTI

>gi568815582r:84466848_84717914|GENSCAN_predicted_CDS_6|489_bp
atgtccgcggcccggcaggcgcacgcccacctgtcggccgcgcaggcgcagcagcgggcc
ggcctccccgcgccccgcggcgcgcggccagtgcgcaggcgcggcggccgatgcgagtgt
gtatgtgcgggcgagaagatggcggcggcgggggaagcagcgaggcagtcagctgtgtac
agaggcccttgtggtcctgtcctgagagtagcggaaggaagacatggctctgcctgggga
gactgtgccttatgcagaggccaacaccacatggatgagccggaagcagccgctggcctg
gctgctctttcgggtcaggaaggctttcttgagtctgagcacttcacacctaatacccta
catacccgctatcctgacgtgtgtgtctggttcactctctcgtcctcccccaatatatgc
cagttcctcctggactcctcagactggaagattgtcctttctccttggcaaatcatctgt
actatctga