GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:52:54

Sequence gi568815582r:57156916_57384540 : 227625 bp : 45.73% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 Intr -   7150   7086   65  0  2   79   98    42 0.525   2.66
 1.05 Intr -  10299  10178  122  0  2  -10   88   138 0.524   3.29
 1.04 Intr -  15457  15309  149  2  2   82   67   147 0.988  11.95
 1.03 Intr -  15959  15861   99  0  0  147   63   141 0.999  17.58
 1.02 Intr -  16954  16813  142  1  1  104   69   147 0.812  14.33
 1.01 Init -  17549  17526   24  2  0   45   90     2 0.220  -4.32
 1.00 Prom -  18418  18379   40                              -3.66

 2.00 Prom +  24251  24290   40                              -6.66
 2.01 Init +  28708  28869  162  0  0   56   43   137 0.717   3.79
 2.02 Term +  29099  29254  156  1  0   84   55   126 0.961   6.83
 2.03 PlyA +  30718  30723    6                               1.05

 3.00 Prom +  39158  39197   40                              -5.36
 3.01 Init +  47861  48093  233  1  2   81   97   127 0.580  10.63
 3.02 Intr +  51143  51195   53  2  2   98   68    -9 0.481  -3.35
 3.03 Intr +  52160  52272  113  0  2   79  106    -4 0.610   0.60
 3.04 Intr +  56057  56183  127  1  1   95   93    11 0.590   2.55
 3.05 Intr +  59989  60120  132  2  0   97   84    45 0.965   5.62
 3.06 Intr +  63817  63932  116  2  2   74   92   122 0.837  11.37
 3.07 Intr +  64357  64500  144  0  0   76   84   168 0.999  15.68
 3.08 Intr +  70427  70505   79  1  1  123   74   197 0.940  20.92
 3.09 Intr +  73796  73898  103  0  1  106   75     5 0.733   0.23
 3.10 Intr +  74252  74404  153  2  0   78  116    40 0.707   4.99
 3.11 Intr +  78209  78313  105  2  0   65  110    23 0.222   1.53
 3.12 Intr +  89165  89226   62  2  2   31   94    77 0.036   0.98
 3.13 Intr +  91622  91728  107  0  2   36  102   144 0.986  10.53
 3.14 Intr +  92852  92937   86  1  2   80   79   111 0.998   8.02
 3.15 Intr +  93496  93592   97  1  1   78   92   113 0.739  10.71
 3.16 Term +  95251  95352  102  0  0   74   42    26 0.324  -5.12
 3.17 PlyA +  97371  97376    6                               1.05

 4.09 PlyA -  97705  97700    6                               1.05
 4.08 Term - 100114  99998  117  1  0  103   40   173 0.992  12.54
 4.07 Intr - 101669 101547  123  2  0   96  109   164 0.999  20.08
 4.06 Intr - 105155 104982  174  2  0   90   89   217 0.986  22.14
 4.05 Intr - 107610 107458  153  0  0   66   73    45 0.300   1.07
 4.04 Intr - 112220 112092  129  2  0   57   94    30 0.097   1.39
 4.03 Intr - 122658 122634   25  2  1   65   88    20 0.011  -2.27
 4.02 Intr - 127340 127261   80  2  2   86   49    85 0.235   2.75
 4.01 Init - 127625 127491  135  2  0  122   85   274 0.996  30.64
 4.00 Prom - 128285 128246   40                              -3.96

 5.00 Prom + 158013 158052   40                              -3.16
 5.01 Sngl + 164382 164648  267  2  0   30   47   199 0.581   5.23
 5.02 PlyA + 165347 165352    6                               1.05

 6.03 PlyA - 166403 166398    6                               1.05
 6.02 Term - 186460 186291  170  2  2   79   41    57 0.322  -1.86
 6.01 Init - 191535 191457   79  0  1   83   90    54 0.806   6.32
 6.00 Prom - 195250 195211   40                              -4.06

 7.00 Prom + 195260 195299   40                              -4.06
 7.01 Init + 201902 201974   73  1  1   68   94   141 0.999  11.94
 7.02 Term + 203522 203649  128  0  2   73   48   193 0.432  12.24
 7.03 PlyA + 204942 204947    6                               1.05

 8.00 Prom + 208947 208986   40                              -7.46
 8.01 Init + 215654 215723   70  1  1   94  119   130 0.993  15.92
 8.02 Intr + 222719 222839  121  0  1   75   53    74 0.728   2.15
 8.03 Term + 225115 226117 1003  1  1   99   43   634 0.855  51.57
 8.04 PlyA + 226421 226426    6                              -1.95


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  89154  89226   73  2  1   51   94    83 0.904   6.43


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:57156916_57384540|GENSCAN_predicted_peptide_1|201_aa
MRFTMEHQIGCFIMDGGDDGNLIIKKRFVSEAELDERRKRRQEEWEKVRKPEDPEECPEE
VYDPRSLYERLQEQKDRKQQEYEEQFKFKNMVRGLDEDETNFLDEVSRQQELIEKQRREE
ELKELKEYRISFVLGGKPKVGISQENKKEVEKKLTVKPIETKNKFSQAKLLAGAVKHKSS
ESGNSVKRLKPDPEPDDKNQX

>gi568815582r:57156916_57384540|GENSCAN_predicted_CDS_1|603_bp
atgagatttactatggaacaccagattggttgtttcattatggatggaggggatgatggt
aaccttattatcaaaaagaggtttgtgtctgaggcagaactagatgaacggcgcaaaagg
aggcaagaagaatgggagaaagttcgaaaacctgaagatccagaagaatgtccagaggag
gtttatgaccctcgatctctatatgaaaggctacaggaacagaaggacaggaagcagcag
gagtacgaggaacagttcaaattcaaaaacatggtaagaggcttagatgaagatgagacc
aacttccttgatgaggtttctcgacagcaggaactaatagaaaagcaacgaagagaagaa
gaactgaaagaactgaaggaatacagaatatcctttgtacttggaggaaaacctaaggtt
ggaatttctcaagagaacaagaaggaagtggaaaagaaactgactgtgaagcctatagaa
accaagaacaagttctcccaggcgaagctgttggcaggagctgtgaagcataagagctca
gagagtggcaacagtgtgaaaagactgaaaccggaccctgagccagatgacaagaatcaa
gnn

>gi568815582r:57156916_57384540|GENSCAN_predicted_peptide_2|105_aa
MPSRGHPQLPSGWARKPQASATPDKERVRGLRTGLALTLTAAAAHLFRKEAGTQGFLFLT
ATIESRPTSGDVTQSAELFLPGSPMEIRYPENEPERLDWAIHASG

>gi568815582r:57156916_57384540|GENSCAN_predicted_CDS_2|318_bp
atgccttcccgcgggcaccctcagctcccctcaggctgggcccgcaagccccaggcttcg
gctactccggacaaggagcgggtgcgcggactgagaacaggcctggccctaaccctaaca
gcagccgcagctcatctcttccgtaaggaagctggaacccagggcttcctgttcctcacc
gccacaatagagtcccgccccacttccggcgacgtaacccaatccgcggagctcttcctc
cccgggagcccgatggaaatccggtaccctgaaaacgagccggagagacttgattgggcc
attcacgcctcaggatga

>gi568815582r:57156916_57384540|GENSCAN_predicted_peptide_3|603_aa
MGNSCICRDDSGTDDSVDTQQQQAENSAVPTADTRSQPRDPVRPPRRGRGPHEPRRKKQN
VDGLVLDTLAVIRTLVDNDQEPPYSMITLHEMAETDEGWLDVVQSLIRVIPLEDPLGPAV
ITLLLDECPLPTKDALQKLTEILNLNGEVACQDSSHPAKHRNTSAVLGCLAEKLAGENKL
TISESSISDRLVTLESWANDPDYLKRQVGFCAQWSLDNLFLKEGRQLTYEKVNLSSIRAM
LNSNDVSEYLKISPHGLEARCDASSFESVRCTFCVDAGVWYYEVTVVTSGVMQIGWATRD
SKFLNHEGYGIGDDEYSCAYDGCRQLIWYNARRDTVGFLLDLNEKQMIFFLNGNQLPPEK
QVFSSTVSGFFAAASFMSYQQCEFNFGAKPFKYPPSMKFSTFNDYAFLTAEEKIILPRHR
RLALLKQVSIRENCCSLCCDEVADTQLKPCGHSSSASDAEFDAVVGYLEDIIMDDEFQLL
QRNFMDKYYLEFEDTEENKLIYTPIFNEYISLVEKYIEEQLLQRIPEFNMAAFTTTLQHH
KDEVAGDIFDMLLTFTDFLAFKEMFLDYRAEKEGRGLDLSSGLVVTSLCKSSSLPASQNN
LRH

>gi568815582r:57156916_57384540|GENSCAN_predicted_CDS_3|1812_bp
atgggtaattcctgtatctgccgagatgacagtggaacagatgacagtgttgacacccaa
cagcaacaggccgagaacagtgcagtacccactgctgacacaaggagccaaccacgggac
cctgttcggccaccaaggaggggccgaggacctcatgagccaaggagaaagaaacaaaat
gtggatgggctagtgttggacacactggcagtaatacggactcttgtagataatgatcag
gaacctccctattcaatgataacattacacgaaatggcagaaacagatgaaggatggttg
gatgttgtccagtctttaattagagttattccactggaagatccactgggaccagctgtt
ataacattgttactagatgaatgtccattgcccactaaagatgcactccagaaattgact
gaaattctcaatttaaatggagaagtagcttgccaggactcaagccatcctgccaaacac
aggaacacatctgcagtcctaggctgcttggccgagaaactagcaggtgaaaataaattg
actatttctgaatccagtattagtgaccggcttgtcacattggagtcctgggctaatgat
cctgattatctgaaacgtcaagttggtttctgtgcccagtggagcttagacaatctcttt
ttaaaagaaggtagacagctgacctatgagaaagtgaacttgagtagcattagggccatg
ctgaatagcaatgatgtcagcgagtacctgaagatctcacctcatggcttagaggctcgc
tgtgatgcctcctcttttgaaagtgtgcgttgcaccttttgtgtggatgccggggtatgg
tactatgaagtaacagtggtcacttctggcgtcatgcagattggctgggccactcgagac
agcaaattcctcaatcatgaaggctacggcattggggatgatgaatactcctgtgcgtat
gatggctgccggcagctgatttggtacaatgccagaagagatacagtaggatttctgtta
gacttgaatgaaaagcaaatgatcttctttttaaatggcaaccagctgcctcctgaaaag
caagtcttttcatctactgtatctggattttttgctgcagctagtttcatgtcatatcaa
caatgtgagttcaattttggagcaaaaccattcaaatacccaccatctatgaaatttagc
acttttaatgactacgccttcctaacagctgaagaaaaaatcattttgccaaggcacagg
cgtcttgctctgttgaagcaagtcagtatccgagaaaactgctgttccctttgttgtgat
gaggtagcagacacacaattgaagccatgtggacacagctcctccgcctctgatgcagaa
tttgatgctgtggttggatatttagaggacattatcatggatgacgagttccagttatta
cagagaaatttcatggacaagtactacctggagtttgaagacacagaagagaataaactc
atctacacacctatttttaatgaatacatttctttggtagaaaaatacattgaagaacag
ctgctgcagcggattcctgagttcaacatggcagccttcaccacaacattacagcaccat
aaggatgaagtggctggtgacatattcgacatgctgctcaccttcacagattttctggct
tttaaagaaatgtttttggactacagagcagaaaaagaaggccgaggactggacttaagc
agtggcttagtggtgacttcattgtgcaaatcatcttctctgccagcttcccagaacaat
ctgcggcactag

>gi568815582r:57156916_57384540|GENSCAN_predicted_peptide_4|311_aa
MAEFPSKVSTRTSSPAQGAEASVSALRPDLGFVRSRLGALMLLQLGASRTDAPKIALHPS
HHDTTPWPSLRAPPEYLGRQGVKGSAQGPSAYEELRECSSKGDLRAGLDFWGLLWEHHRL
ICQGRVLVSVMVEEIGLLVPKHIVYLAYIMCRALLGTEDTAVNKTQNLPRRAGKVLGLLV
WALIADTPYHLYPAYGWVMFVAVFLWLVTIVLFNLYLFQLHMKLYMVPWPLVLMIFNISA
TVLYITAFIACSAAVDLTSLRGTRPYNQRAAASFFACLVMIAYGVSAFFSYQAWRGVGSN
AATSQMAGGYA

>gi568815582r:57156916_57384540|GENSCAN_predicted_CDS_4|936_bp
atggccgagttcccgtcgaaagttagcacgcggaccagcagtcctgcgcagggcgccgaa
gcctcggtgtcggcgctgcgcccggacctgggcttcgtgcgctcccgcctcggggcgctc
atgctgctgcagctgggcgcttcccgcacggacgcccccaagatcgccctgcatccctct
caccacgacactaccccgtggccgtcgctgcgagcgcctcctgagtatctgggacgacag
ggggtgaaggggtctgcccaaggcccctcagcctatgaggagctgagggagtgcagctcc
aagggagatctgagggctgggctggatttctggggcctcctgtgggagcaccaccgcctt
atctgtcagggcagggttctggtctctgtcatggttgaagaaataggattgttagttcct
aagcacattgtgtatttagcgtatattatgtgtcgggcactgttgggcactgaagataca
gcagtgaacaaaacccagaatcttcctcggagagcagggaaggtgctggggctgctggtg
tgggcgctgattgcggacaccccgtaccacctgtatccggcctatggctgggtgatgttc
gtcgctgtcttcctctggctggtgacaatcgtcctcttcaacctctacctgtttcagctg
cacatgaagttgtacatggttccctggccactggtgttaatgatctttaacatcagcgcc
accgttctctacatcaccgccttcatcgcctgctctgcggcagttgacctgacatccctg
aggggcacccggccttataaccagcgcgcggctgcctcgttctttgcgtgtttggtgatg
atcgcctatggagtgagtgccttcttcagctaccaggcctggcgaggagtaggcagcaat
gcggccaccagtcagatggctggcggctatgcctaa

>gi568815582r:57156916_57384540|GENSCAN_predicted_peptide_5|88_aa
MLYDRINDEKSRNRPFSQDGTKGKEGSSCPPKAEAKSKALKDKKAVLKGVHSHIKKKIHT
SPIFPWPRRCDSRGSPDILRRAPQEKQA

>gi568815582r:57156916_57384540|GENSCAN_predicted_CDS_5|267_bp
atgctatatgatagaataaatgatgaaaaatctcgaaatagacccttttcacaagatggc
accaaaggcaaagaaggaagctcctgcccccctaaagctgaagccaaatcgaaggctttg
aaggacaagaaggcagtgctgaaaggtgtccacagccacataaaaaagaagatccacaca
tcacccatcttcccgtggccaagacgctgcgactccagaggcagcccagatatcctcaga
agagcaccccaggagaaacaagcttga

>gi568815582r:57156916_57384540|GENSCAN_predicted_peptide_6|82_aa
MQFWVLGVPNKELEETHMESKAKQQQETRSYQKTTPTCNCRICPLHFPCSSLKDKLVQPK
ACGSLEAQDSFECGPTQMRKLS

>gi568815582r:57156916_57384540|GENSCAN_predicted_CDS_6|249_bp
atgcagttctgggttcttggtgtcccgaacaaagaactggaggagacacacatggaaagc
aaagcaaagcagcaacaggaaacgagaagttaccagaagaccacacccacctgcaactgt
cgcatctgcccactgcattttccttgttcctcactcaaggataagcttgtccaacccaag
gcctgtgggtcgcttgaggcccaggacagctttgaatgtggcccaacacaaatgcgtaaa
ctttcttaa

>gi568815582r:57156916_57384540|GENSCAN_predicted_peptide_7|66_aa
MDRLQTALLVVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYRLPLRVVKHFYWTSDSC
PRPGVV

>gi568815582r:57156916_57384540|GENSCAN_predicted_CDS_7|201_bp
atggatcgcctacagactgcactcctggttgtcctcgtcctccttgctgtggcgcttcaa
gcaactgaggcaggcccctacggcgccaacatggaagacagcgtctgctgccgtgattac
gtccgttaccgtctgcccctgcgcgtggtgaaacacttctactggacctcagactcctgc
ccgaggcctggcgtggtgtga

>gi568815582r:57156916_57384540|GENSCAN_predicted_peptide_8|397_aa
MAPISLSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK
RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG
MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP
VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA
PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE
PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF
TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV

>gi568815582r:57156916_57384540|GENSCAN_predicted_CDS_8|1194_bp
atggctccgatatctctgtcgtggctgctccgcttggccaccttctgccatctgactgtc
ctgctggctggacagcaccacggtgtgacgaaatgcaacatcacgtgcagcaagatgaca
tcaaagatacctgtagctttgctcatccactatcaacagaaccaggcatcatgcggcaaa
cgcgcaatcatcttggagacgagacagcacaggctgttctgtgccgacccgaaggagcaa
tgggtcaaggacgcgatgcagcatctggaccgccaggctgctgccctaactcgaaatggc
ggcaccttcgagaagcagatcggcgaggtgaagcccaggaccacccctgccgccggggga
atggacgagtctgtggtcctggagcccgaagccacaggcgaaagcagtagcctggagccg
actccttcttcccaggaagcacagagggccctggggacctccccagagctgccgacgggc
gtgactggttcctcagggaccaggctccccccgacgccaaaggctcaggatggagggcct
gtgggcacggagcttttccgagtgcctcccgtctccactgccgccacgtggcagagttct
gctccccaccaacctgggcccagcctctgggctgaggcaaagacctctgaggccccgtcc
acccaggacccctccacccaggcctccactgcgtcctccccagccccagaggagaatgct
ccgtctgaaggccagcgtgtgtggggtcagggacagagccccaggccagagaactctctg
gagcgggaggagatgggtcccgtgccagcgcacacggatgccttccaggactgggggcct
ggcagcatggcccacgtctctgtggtccctgtctcctcagaagggacccccagcagggag
ccagtggcttcaggcagctggacccctaaggctgaggaacccatccatgccaccatggac
ccccagaggctgggcgtccttatcactcctgtccctgacgcccaggctgccacccggagg
caggcggtggggctgctggccttccttggcctcctcttctgcctgggggtggccatgttc
acctaccagagcctccagggctgccctcgaaagatggcaggagagatggcggagggcctt
cgctacatcccccggagctgtggtagtaattcatatgtcctggtgcccgtgtga