GENSCAN 1.0	Date run:  6-Nov-116	Time: 04:25:23

Sequence gi568815582f:57145368_57352264 : 206897 bp : 45.00% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    646    954  309  0  0   40   92   571 0.895  48.01
 1.02 Term +   2184   2291  108  2  0  112   49   117 0.998   8.71
 1.03 PlyA +   2578   2583    6                               1.05

 2.08 PlyA -   3277   3272    6                               1.05
 2.07 Term -   9068   8923  146  0  2   75   29   241 0.679  14.97
 2.06 Intr -  18698  18634   65  1  2   79   98    42 0.935   2.66
 2.05 Intr -  21847  21726  122  1  2  -10   88   138 0.603   3.29
 2.04 Intr -  27005  26857  149  0  2   82   67   147 0.991  11.95
 2.03 Intr -  27507  27409   99  1  0  147   63   141 0.999  17.58
 2.02 Intr -  28502  28361  142  2  1  104   69   147 0.812  14.33
 2.01 Init -  29097  29074   24  0  0   45   90     2 0.220  -4.32
 2.00 Prom -  29966  29927   40                              -3.66

 3.00 Prom +  35799  35838   40                              -6.66
 3.01 Init +  40256  40417  162  1  0   56   43   137 0.717   3.79
 3.02 Term +  40647  40802  156  2  0   84   55   126 0.961   6.83
 3.03 PlyA +  42266  42271    6                               1.05

 4.00 Prom +  50706  50745   40                              -5.36
 4.01 Init +  59409  59641  233  2  2   81   97   127 0.580  10.63
 4.02 Intr +  62691  62743   53  0  2   98   68    -9 0.481  -3.35
 4.03 Intr +  63708  63820  113  1  2   79  106    -4 0.610   0.60
 4.04 Intr +  67605  67731  127  2  1   95   93    11 0.590   2.55
 4.05 Intr +  71537  71668  132  0  0   97   84    45 0.965   5.62
 4.06 Intr +  75365  75480  116  0  2   74   92   122 0.837  11.37
 4.07 Intr +  75905  76048  144  1  0   76   84   168 0.999  15.68
 4.08 Intr +  81975  82053   79  2  1  123   74   197 0.940  20.92
 4.09 Intr +  85344  85446  103  1  1  106   75     5 0.733   0.23
 4.10 Intr +  85800  85952  153  0  0   78  116    40 0.707   4.99
 4.11 Intr +  89757  89861  105  0  0   65  110    23 0.222   1.53
 4.12 Intr + 100713 100774   62  0  2   31   94    77 0.036   0.98
 4.13 Intr + 103170 103276  107  1  2   36  102   144 0.986  10.53
 4.14 Intr + 104400 104485   86  2  2   80   79   111 0.998   8.02
 4.15 Intr + 105044 105140   97  2  1   78   92   113 0.739  10.71
 4.16 Term + 106799 106900  102  1  0   74   42    26 0.324  -5.12
 4.17 PlyA + 108919 108924    6                               1.05

 5.09 PlyA - 109253 109248    6                               1.05
 5.08 Term - 111662 111546  117  2  0  103   40   173 0.992  12.54
 5.07 Intr - 113217 113095  123  0  0   96  109   164 0.999  20.08
 5.06 Intr - 116703 116530  174  0  0   90   89   217 0.986  22.14
 5.05 Intr - 119158 119006  153  1  0   66   73    45 0.300   1.07
 5.04 Intr - 123768 123640  129  0  0   57   94    30 0.097   1.39
 5.03 Intr - 134206 134182   25  0  1   65   88    20 0.011  -2.27
 5.02 Intr - 138888 138809   80  0  2   86   49    85 0.235   2.75
 5.01 Init - 139173 139039  135  0  0  122   85   274 0.996  30.64
 5.00 Prom - 139833 139794   40                              -3.96

 6.00 Prom + 169561 169600   40                              -3.16
 6.01 Sngl + 175930 176196  267  0  0   30   47   199 0.581   5.23
 6.02 PlyA + 176895 176900    6                               1.05

 7.03 PlyA - 177951 177946    6                               1.05
 7.02 Term - 198008 197839  170  0  2   79   41    57 0.324  -1.86
 7.01 Init - 203083 203005   79  1  1   83   90    54 0.794   6.32

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100702 100774   73  0  1   51   94    83 0.904   6.43


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:57145368_57352264|GENSCAN_predicted_peptide_1|138_aa
MKEGGRRGARASTLLSAPLAPSLQQYFILLIITDGVISDMEETRHAVVQASKLPMSIIIV
GVGNADFAAMEFLDGDSRMLRSHTGEEAARDIVQFVPFREFRNAAKETLAKAVLAELPQQ
VVQYFKHKNLPPTNSEPA

>gi568815582f:57145368_57352264|GENSCAN_predicted_CDS_1|417_bp
atgaaggagggagggagaaggggtgccagagcctcgaccttgctgagtgccccgttggcc
ccctccctgcagcagtacttcatcctcctcatcatcacggacggggtcatcagtgacatg
gaggagacacggcatgccgtggtgcaggcttccaagctgcccatgtccatcatcatcgtg
ggcgtgggcaatgcggacttcgctgccatggagttcctggatggggacagccgcatgctg
cgctcccacacgggggaggaggcagcccgcgatattgtgcagttcgttccctttcgagag
ttccgcaacgcagcaaaagagaccttggccaaagctgtgctggcggagctgccccaacaa
gttgtgcagtatttcaagcataaaaacctgccccccaccaactcggagcccgcctga

>gi568815582f:57145368_57352264|GENSCAN_predicted_peptide_2|248_aa
MRFTMEHQIGCFIMDGGDDGNLIIKKRFVSEAELDERRKRRQEEWEKVRKPEDPEECPEE
VYDPRSLYERLQEQKDRKQQEYEEQFKFKNMVRGLDEDETNFLDEVSRQQELIEKQRREE
ELKELKEYRISFVLGGKPKVGISQENKKEVEKKLTVKPIETKNKFSQAKLLAGAVKHKSS
ESGNSVKRLKPDPEPDDKNQVCIGILPGLGAYSGSSDSESSSDSEGTINATGKIVSSIFR
TNTFLEAP

>gi568815582f:57145368_57352264|GENSCAN_predicted_CDS_2|747_bp
atgagatttactatggaacaccagattggttgtttcattatggatggaggggatgatggt
aaccttattatcaaaaagaggtttgtgtctgaggcagaactagatgaacggcgcaaaagg
aggcaagaagaatgggagaaagttcgaaaacctgaagatccagaagaatgtccagaggag
gtttatgaccctcgatctctatatgaaaggctacaggaacagaaggacaggaagcagcag
gagtacgaggaacagttcaaattcaaaaacatggtaagaggcttagatgaagatgagacc
aacttccttgatgaggtttctcgacagcaggaactaatagaaaagcaacgaagagaagaa
gaactgaaagaactgaaggaatacagaatatcctttgtacttggaggaaaacctaaggtt
ggaatttctcaagagaacaagaaggaagtggaaaagaaactgactgtgaagcctatagaa
accaagaacaagttctcccaggcgaagctgttggcaggagctgtgaagcataagagctca
gagagtggcaacagtgtgaaaagactgaaaccggaccctgagccagatgacaagaatcaa
gtatgtatcggcatcctcccaggcctgggtgcctactctgggagcagcgactccgagtcc
agctcagacagcgaaggcaccatcaatgccaccggaaagattgtctcctccatcttccga
accaacaccttcctcgaggccccctag

>gi568815582f:57145368_57352264|GENSCAN_predicted_peptide_3|105_aa
MPSRGHPQLPSGWARKPQASATPDKERVRGLRTGLALTLTAAAAHLFRKEAGTQGFLFLT
ATIESRPTSGDVTQSAELFLPGSPMEIRYPENEPERLDWAIHASG

>gi568815582f:57145368_57352264|GENSCAN_predicted_CDS_3|318_bp
atgccttcccgcgggcaccctcagctcccctcaggctgggcccgcaagccccaggcttcg
gctactccggacaaggagcgggtgcgcggactgagaacaggcctggccctaaccctaaca
gcagccgcagctcatctcttccgtaaggaagctggaacccagggcttcctgttcctcacc
gccacaatagagtcccgccccacttccggcgacgtaacccaatccgcggagctcttcctc
cccgggagcccgatggaaatccggtaccctgaaaacgagccggagagacttgattgggcc
attcacgcctcaggatga

>gi568815582f:57145368_57352264|GENSCAN_predicted_peptide_4|603_aa
MGNSCICRDDSGTDDSVDTQQQQAENSAVPTADTRSQPRDPVRPPRRGRGPHEPRRKKQN
VDGLVLDTLAVIRTLVDNDQEPPYSMITLHEMAETDEGWLDVVQSLIRVIPLEDPLGPAV
ITLLLDECPLPTKDALQKLTEILNLNGEVACQDSSHPAKHRNTSAVLGCLAEKLAGENKL
TISESSISDRLVTLESWANDPDYLKRQVGFCAQWSLDNLFLKEGRQLTYEKVNLSSIRAM
LNSNDVSEYLKISPHGLEARCDASSFESVRCTFCVDAGVWYYEVTVVTSGVMQIGWATRD
SKFLNHEGYGIGDDEYSCAYDGCRQLIWYNARRDTVGFLLDLNEKQMIFFLNGNQLPPEK
QVFSSTVSGFFAAASFMSYQQCEFNFGAKPFKYPPSMKFSTFNDYAFLTAEEKIILPRHR
RLALLKQVSIRENCCSLCCDEVADTQLKPCGHSSSASDAEFDAVVGYLEDIIMDDEFQLL
QRNFMDKYYLEFEDTEENKLIYTPIFNEYISLVEKYIEEQLLQRIPEFNMAAFTTTLQHH
KDEVAGDIFDMLLTFTDFLAFKEMFLDYRAEKEGRGLDLSSGLVVTSLCKSSSLPASQNN
LRH

>gi568815582f:57145368_57352264|GENSCAN_predicted_CDS_4|1812_bp
atgggtaattcctgtatctgccgagatgacagtggaacagatgacagtgttgacacccaa
cagcaacaggccgagaacagtgcagtacccactgctgacacaaggagccaaccacgggac
cctgttcggccaccaaggaggggccgaggacctcatgagccaaggagaaagaaacaaaat
gtggatgggctagtgttggacacactggcagtaatacggactcttgtagataatgatcag
gaacctccctattcaatgataacattacacgaaatggcagaaacagatgaaggatggttg
gatgttgtccagtctttaattagagttattccactggaagatccactgggaccagctgtt
ataacattgttactagatgaatgtccattgcccactaaagatgcactccagaaattgact
gaaattctcaatttaaatggagaagtagcttgccaggactcaagccatcctgccaaacac
aggaacacatctgcagtcctaggctgcttggccgagaaactagcaggtgaaaataaattg
actatttctgaatccagtattagtgaccggcttgtcacattggagtcctgggctaatgat
cctgattatctgaaacgtcaagttggtttctgtgcccagtggagcttagacaatctcttt
ttaaaagaaggtagacagctgacctatgagaaagtgaacttgagtagcattagggccatg
ctgaatagcaatgatgtcagcgagtacctgaagatctcacctcatggcttagaggctcgc
tgtgatgcctcctcttttgaaagtgtgcgttgcaccttttgtgtggatgccggggtatgg
tactatgaagtaacagtggtcacttctggcgtcatgcagattggctgggccactcgagac
agcaaattcctcaatcatgaaggctacggcattggggatgatgaatactcctgtgcgtat
gatggctgccggcagctgatttggtacaatgccagaagagatacagtaggatttctgtta
gacttgaatgaaaagcaaatgatcttctttttaaatggcaaccagctgcctcctgaaaag
caagtcttttcatctactgtatctggattttttgctgcagctagtttcatgtcatatcaa
caatgtgagttcaattttggagcaaaaccattcaaatacccaccatctatgaaatttagc
acttttaatgactacgccttcctaacagctgaagaaaaaatcattttgccaaggcacagg
cgtcttgctctgttgaagcaagtcagtatccgagaaaactgctgttccctttgttgtgat
gaggtagcagacacacaattgaagccatgtggacacagctcctccgcctctgatgcagaa
tttgatgctgtggttggatatttagaggacattatcatggatgacgagttccagttatta
cagagaaatttcatggacaagtactacctggagtttgaagacacagaagagaataaactc
atctacacacctatttttaatgaatacatttctttggtagaaaaatacattgaagaacag
ctgctgcagcggattcctgagttcaacatggcagccttcaccacaacattacagcaccat
aaggatgaagtggctggtgacatattcgacatgctgctcaccttcacagattttctggct
tttaaagaaatgtttttggactacagagcagaaaaagaaggccgaggactggacttaagc
agtggcttagtggtgacttcattgtgcaaatcatcttctctgccagcttcccagaacaat
ctgcggcactag

>gi568815582f:57145368_57352264|GENSCAN_predicted_peptide_5|311_aa
MAEFPSKVSTRTSSPAQGAEASVSALRPDLGFVRSRLGALMLLQLGASRTDAPKIALHPS
HHDTTPWPSLRAPPEYLGRQGVKGSAQGPSAYEELRECSSKGDLRAGLDFWGLLWEHHRL
ICQGRVLVSVMVEEIGLLVPKHIVYLAYIMCRALLGTEDTAVNKTQNLPRRAGKVLGLLV
WALIADTPYHLYPAYGWVMFVAVFLWLVTIVLFNLYLFQLHMKLYMVPWPLVLMIFNISA
TVLYITAFIACSAAVDLTSLRGTRPYNQRAAASFFACLVMIAYGVSAFFSYQAWRGVGSN
AATSQMAGGYA

>gi568815582f:57145368_57352264|GENSCAN_predicted_CDS_5|936_bp
atggccgagttcccgtcgaaagttagcacgcggaccagcagtcctgcgcagggcgccgaa
gcctcggtgtcggcgctgcgcccggacctgggcttcgtgcgctcccgcctcggggcgctc
atgctgctgcagctgggcgcttcccgcacggacgcccccaagatcgccctgcatccctct
caccacgacactaccccgtggccgtcgctgcgagcgcctcctgagtatctgggacgacag
ggggtgaaggggtctgcccaaggcccctcagcctatgaggagctgagggagtgcagctcc
aagggagatctgagggctgggctggatttctggggcctcctgtgggagcaccaccgcctt
atctgtcagggcagggttctggtctctgtcatggttgaagaaataggattgttagttcct
aagcacattgtgtatttagcgtatattatgtgtcgggcactgttgggcactgaagataca
gcagtgaacaaaacccagaatcttcctcggagagcagggaaggtgctggggctgctggtg
tgggcgctgattgcggacaccccgtaccacctgtatccggcctatggctgggtgatgttc
gtcgctgtcttcctctggctggtgacaatcgtcctcttcaacctctacctgtttcagctg
cacatgaagttgtacatggttccctggccactggtgttaatgatctttaacatcagcgcc
accgttctctacatcaccgccttcatcgcctgctctgcggcagttgacctgacatccctg
aggggcacccggccttataaccagcgcgcggctgcctcgttctttgcgtgtttggtgatg
atcgcctatggagtgagtgccttcttcagctaccaggcctggcgaggagtaggcagcaat
gcggccaccagtcagatggctggcggctatgcctaa

>gi568815582f:57145368_57352264|GENSCAN_predicted_peptide_6|88_aa
MLYDRINDEKSRNRPFSQDGTKGKEGSSCPPKAEAKSKALKDKKAVLKGVHSHIKKKIHT
SPIFPWPRRCDSRGSPDILRRAPQEKQA

>gi568815582f:57145368_57352264|GENSCAN_predicted_CDS_6|267_bp
atgctatatgatagaataaatgatgaaaaatctcgaaatagacccttttcacaagatggc
accaaaggcaaagaaggaagctcctgcccccctaaagctgaagccaaatcgaaggctttg
aaggacaagaaggcagtgctgaaaggtgtccacagccacataaaaaagaagatccacaca
tcacccatcttcccgtggccaagacgctgcgactccagaggcagcccagatatcctcaga
agagcaccccaggagaaacaagcttga

>gi568815582f:57145368_57352264|GENSCAN_predicted_peptide_7|82_aa
MQFWVLGVPNKELEETHMESKAKQQQETRSYQKTTPTCNCRICPLHFPCSSLKDKLVQPK
ACGSLEAQDSFECGPTQMRKLS

>gi568815582f:57145368_57352264|GENSCAN_predicted_CDS_7|249_bp
atgcagttctgggttcttggtgtcccgaacaaagaactggaggagacacacatggaaagc
aaagcaaagcagcaacaggaaacgagaagttaccagaagaccacacccacctgcaactgt
cgcatctgcccactgcattttccttgttcctcactcaaggataagcttgtccaacccaag
gcctgtgggtcgcttgaggcccaggacagctttgaatgtggcccaacacaaatgcgtaaa
ctttcttaa