GENSCAN 1.0	Date run:  6-Nov-116	Time: 04:32:42

Sequence gi568815582f:54831199_55033870 : 202672 bp : 43.57% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  23628  23698   71  0  2   64   80    94 0.031   5.03
 1.02 Intr +  24729  24882  154  1  1   95   77   -22 0.016  -3.47
 1.03 Intr +  25764  25865  102  0  0   27  116    80 0.020   3.99
 1.04 Intr +  62031  62169  139  0  1  108   44    74 0.011   5.47
 1.05 Intr +  66944  67045  102  1  0   22   89    64 0.005   0.27
 1.06 Intr +  87245  87361  117  1  0   66   84    46 0.155   2.66
 1.07 Term +  91782  92060  279  2  0   29   55   177 0.708   3.95
 1.08 PlyA +  92267  92272    6                               1.05

 2.00 Prom +  96824  96863   40                              -4.76
 2.01 Init + 100001 100249  249  1  0   80  103   484 0.898  44.56
 2.02 Intr + 101300 101705  406  1  1  130   77   922 0.960  89.22
 2.03 Intr + 101879 102658  780  0  0  119   95   543 0.636  49.55
 2.04 Intr + 105286 105409  124  2  1   47    1   125 0.113  -0.66
 2.05 Intr + 109519 109662  144  1  0   78   92    68 0.250   5.60
 2.06 Intr + 121296 121379   84  0  0   70   48   110 0.455   4.14
 2.07 Term + 123288 123447  160  0  1  113   37    73 0.492   2.11
 2.08 PlyA + 129687 129692    6                               1.05

 3.09 PlyA - 132523 132518    6                               1.05
 3.08 Term - 132812 132787   26  0  2  119   47    48 0.671   2.19
 3.07 Intr - 135469 135418   52  1  1   79   86    56 0.272   2.98
 3.06 Intr - 137042 136920  123  2  0   64  116    18 0.468   2.98
 3.05 Intr - 141735 141660   76  2  1   83   64    47 0.027   1.32
 3.04 Intr - 146250 146226   25  1  1   82   86    18 0.132  -1.92
 3.03 Intr - 154378 154218  161  0  2   44   70   110 0.131   4.43
 3.02 Intr - 172255 172143  113  1  2   87   45    83 0.023   3.08
 3.01 Intr - 188021 187926   96  2  0   83   37   109 0.103   5.51

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  23628  23781  154  0  1   64   38   161 0.832   6.09


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:54831199_55033870|GENSCAN_predicted_peptide_1|321_aa
XYCTREEVVINYEGIQTFNPVELPNLWGLSFGECELLEGNSPAIFVYTSIANKTILGTQW
VLNMYLLINRLRFLERHIIFKLLKTRDNENILKAANENRHTVHTEVKNQRGWQPQSTQSE
LSLTYYPPTPVREASEKTPPTLEAEDLSSNLRMRTAGSLKEEDVKECVAFHQKRMRREKT
LQMEEAADPQMYPFTVSTPKRLETCLYKRILPSSYSCYKGHNKVFPNGKLQSKQQANLGK
DYVKSGKAPKALNQEKNPCAGAPGLQDTTMPQAGPNYFSAEHWNQLPNTKSYTQSLVMSS
SKSSSRKHIPPNEGNKELGGE

>gi568815582f:54831199_55033870|GENSCAN_predicted_CDS_1|966_bp
nngtactgcaccagggaagaggtggtcatcaactatgaaggaatccagacctttaatcct
gtagagcttccaaatttgtggggcctttcctttggagaatgtgaactccttgaaggaaac
agccctgccatatttgtttatacctccatagcaaacaaaacaattctgggcacacaatgg
gtgctaaatatgtacttgctgattaatagattaagattcttagagaggcatatcatattc
aaactgctgaaaaccagagacaatgagaacattctgaaggcagccaatgaaaacagacac
actgtacacacagaagttaaaaaccaaaggggttggcagccccaatctacacagtcagaa
ctaagtcttacctattatccaccaacaccagtacgtgaagccagtgagaaaactccacca
accttggaagcagaggatctaagctcaaacttgagaatgcgaacagcgggaagcctcaaa
gaggaggatgtgaaagagtgtgtggcatttcatcagaaaaggatgagacgagagaagacc
ctccaaatggaagaggcagcagacccacagatgtaccccttcacagtgtccacaccaaag
aggctagagacctgtctatacaaaagaattcttccatcttcctatagctgctacaaaggc
cacaacaaggtatttcccaatggcaagctgcaaagtaagcagcaagccaacctaggaaaa
gattacgtgaaaagtggaaaggcacctaaggctctgaaccaggaaaagaacccctgtgca
ggagctcccggcctccaggacactacaatgccccaggctgggcccaactacttctcagca
gagcactggaaccagctgccaaacaccaagtcttatactcagagtttggtcatgtctagc
agtaaatcatccagcagaaaacacatccccccaaatgaaggcaacaaagaactgggaggc
gaatga

>gi568815582f:54831199_55033870|GENSCAN_predicted_peptide_2|648_aa
MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGADPAAAAAAAFSSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNA
TRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWT
PRNRSEDEEEEENIDLEKNDEDEPQKPEDKGDPEGPEAGGAEQKAASGCERLQGPPTPAG
KETEGSLSDSDFKEPPSEGRLDALQGPPRTGGPSPAGPAAARLAEDPAPHYPAGAPAPGP
HPAAGEVPPGPGGPSVIHSPPPPPPPAVLAKPKLWSLAEIATSSDKVKDGGGGNEGSPCP
PCPGPIAGQALGGSRASPAPAPSRSPSAQCPFPGGTVLSRPLYYTAPFYPGYTNYGSFGH
LHGHPGPGPGPTTGPGSHFNGLNQTVLNRADALAKDPKMLRSQSQLDLCKDSPYELKKGT
ARRASGWGAKPLGTPRLLPESLSAARIPSALGLCTVCGFLFPGWGLITGTVRETGRQFDQ
GVTCSELSFLELTGAATWLVYMAESTFRCWKLHQPGSQIEDNEEHRSLLTLDGFVLLLQR
NPATWKPCVEDKRTTRWNTSGFLMYFPPNTSFGGKPTPMRSAHFGLDK

>gi568815582f:54831199_55033870|GENSCAN_predicted_CDS_2|1947_bp
atgtcctatccgcagggctacttgtaccagccgtccgcctcgctggcgctctactcgtgc
ccggcgtacagcaccagcgtcatttcggggccccgcacggatgagctcggccgctcttct
tcgggctccgcgttctcgccctacgctggctcgactgccttcacggcgccctcgccgggc
tacaactcgcacctccagtacggcgccgaccccgcggccgccgccgccgccgccttctcc
tcgtacgtgggctctccctacgaccacacacccggcatggcgggctccttggggtaccat
ccttacgcggcgcccctgggatcgtacccttacggggacccagcgtaccggaagaacgcc
acaagggacgccacggctaccctcaaggcctggctcaacgagcaccgcaagaacccctac
cccaccaagggcgagaagatcatgctggccatcatcaccaagatgaccctcacccaggtg
tccacctggttcgccaacgcgcgccggcgcctcaagaaagagaataaaatgacgtggacg
ccgcggaaccgcagcgaggacgaggaagaggaggagaacattgacctggagaagaacgac
gaggacgagccccagaagcccgaggacaagggcgaccccgagggccccgaagcaggagga
gctgagcagaaggcggcttcgggctgcgaacggcttcagggaccacccacccctgcaggc
aaggagacggagggcagcctcagcgactcggattttaaggagccgccctcggagggccgc
ctcgacgcgctgcagggccccccccgcaccggcgggccctccccggctgggccagcggcg
gcgcggctggcggaggacccggcccctcactaccccgccggagcgccggcgcccggcccg
catccagccgcgggcgaggtgcctccgggtcccggcgggccctcggttatccattcgccg
cctccgccgccgcctcctgcggtgctcgccaagcccaaactgtggtctttggcagagatc
gccacatcgtcggacaaggtcaaggacgggggcggcgggaacgagggctctccatgccca
ccgtgtcccgggcccatagccgggcaagccctaggaggcagccgggcgtcgccggccccg
gcgccgtcacgctcgccctcggcgcagtgtccttttccaggcgggacggtgctgtcccgg
cctctctactacaccgcgcccttctatcccggctacacgaactatggctccttcggacac
cttcatggccacccggggcccgggccaggccccacaaccggtccggggtctcatttcaat
ggattaaaccagaccgtgttgaaccgagcggacgctttggctaaagacccgaaaatgttg
cggagccagtctcagctagacctgtgcaaagactctccctatgaattgaagaaaggaacg
gcgcggagagcctccggctggggagctaaaccgctggggactccgcggctgctgcctgag
tcgctgtccgctgcccgcatcccttccgccctgggcctctgcacggtctgcggttttctc
tttcctggctggggcttgataactgggacagtgagggagactggaaggcagtttgaccag
ggagtgacctgctcagagttgagctttctggagctgactggagctgctacgtggcttgtt
tacatggcagaatctactttcagatgttggaagctccatcagcctgggtcccagattgag
gacaacgaggagcacagatctctgctgacccttgatggatttgtactcttgctgcagagg
aacccagccacttggaagccatgtgttgaagataaaaggaccacaagatggaatacatcc
ggtttcctgatgtattttcctccaaatacatcatttggaggaaagccaactccaatgcgt
agtgctcattttggacttgataaataa

>gi568815582f:54831199_55033870|GENSCAN_predicted_peptide_3|223_aa
SGGRHIPGQASGPCRIAHCPVMLAAPVSECRKVFVIQQTPGPLSIASWGLYEEVHTHFRN
QLDGLENGPRYERLKPLVKVASPADTALKPCVPELVTLARPVQKITEVQMHVPIGKIRRP
RIKGGSSTDETGYGDVDSSTLGPQPFFQVSLVVEQTQILDENQGKCYKALSLVPPSGCSA
QSPSLDKCHPLGLRQSPKMGKLVLKEVGNLCKVISKICVFFVG

>gi568815582f:54831199_55033870|GENSCAN_predicted_CDS_3|672_bp
tctgggggacgccacattcccggacaagccagcgggccatgccgcatcgcacactgcccg
gtgatgctggcggcccccgtgtctgagtgcagaaaggtgtttgtcatacaacagacacca
ggtccactgagcattgccagctggggactgtatgaagaggttcacactcacttcaggaac
caattggatgggctggaaaatggtccccgatacgagcgtctgaaacccctggtgaaagta
gcatctcctgcagacacagccttaaaaccctgtgtcccagaacttgtgaccctagccaga
cccgtgcagaagatcacggaagtacagatgcatgttcccattggcaagatcaggaggcca
aggatcaaagggggctctagcacagatgagactgggtatggagacgttgattcctcaacc
ctgggtccccagcccttttttcaagtatctctggtggtggaacagacccagatcctggat
gagaaccaagggaagtgctacaaagccctgagccttgtccctccctctggctgcagtgcc
cagtccccttctctggacaagtgccatcctttaggtcttaggcagagccccaagatggga
aaactggtgctcaaggaggtaggtaacttgtgcaaggtcatcagtaaaatatgtgtcttc
ttcgtcggctga