GENSCAN 1.0	Date run:  8-Nov-116	Time: 04:16:52

Sequence gi568815582r:51037115_51241930 : 204816 bp : 44.32% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    107    238  132  1  0   72  103    32 0.528   3.94
 1.02 Intr +    841    942  102  0  0   14  100    70 0.475   1.17
 1.03 Term +   9936  10142  207  2  0   18   36   367 0.859  21.84
 1.04 PlyA +  15259  15264    6                               1.05

 2.06 PlyA -  16648  16643    6                               1.05
 2.05 Term -  21402  21380   23  1  2  129   40    21 0.221  -0.13
 2.04 Intr -  21625  21471  155  0  2   90   70     4 0.236  -1.48
 2.03 Intr -  25298  25132  167  2  2  116   59    80 0.561   6.66
 2.02 Intr -  28076  27928  149  0  2   77   97    38 0.374   3.55
 2.01 Init -  41115  41097   19  0  1   90   87     3 0.080   0.64
 2.00 Prom -  49063  49024   40                              -3.86

 3.00 Prom +  53648  53687   40                              -2.46
 3.01 Init +  78863  79000  138  1  0   55    7   280 0.426  14.74
 3.02 Intr +  83431  83480   50  0  2   47   89    75 0.142   0.98
 3.03 Intr +  88877  88929   53  2  2   97   58    31 0.329  -0.45
 3.04 Term +  94821  94969  149  1  2   87   45   152 0.833   8.86
 3.05 PlyA +  96471  96476    6                               1.05

 4.08 PlyA -  99586  99581    6                               1.05
 4.07 Term - 100438  99998  441  1  0   94   42   626 0.991  53.86
 4.06 Intr - 105031 101574 3458  2  2   76   77  2687 0.598 253.79
 4.05 Intr - 116898 116644  255  1  0    1   60   168 0.002   2.72
 4.04 Intr - 135435 135304  132  1  0   63   71    80 0.545   4.42
 4.03 Intr - 140546 140522   25  2  1   67  107    10 0.055  -1.60
 4.02 Intr - 148479 148289  191  1  2   84   99    58 0.652   5.80
 4.01 Init - 156086 156011   76  2  1   91  107    28 0.918   6.34
 4.00 Prom - 158390 158351   40                              -4.96

 5.05 PlyA - 159013 159008    6                               1.05
 5.04 Term - 160538 160519   20  0  2  109   36    40 0.680  -0.62
 5.03 Intr - 160990 160877  114  2  0  111   93    65 0.697   9.72
 5.02 Intr - 177093 176923  171  1  0    9   92    91 0.022   1.51
 5.01 Init - 189467 189455   13  2  1  114   98    20 0.563   4.90
 5.00 Prom - 196865 196826   40                              -1.46

 6.04 PlyA - 197432 197427    6                               1.05
 6.03 Term - 202884 202096  789  0  0    9   44   737 0.972  54.72
 6.02 Intr - 203244 202914  331  2  1   72  -78   261 0.467   3.53
 6.01 Init - 204086 204013   74  2  2   92   39    42 0.506   0.24

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:51037115_51241930|GENSCAN_predicted_peptide_1|146_aa
GHPLPISREAEKLMCREVVGKEAFPEVTDRHIGCDPLPLEFTMQGCFHLLAVTNNADMKS
NAQLHVVFVSYSSKQIYKPGRQERDSVSKNKKKKEKEKEKEKEKEKEKEKKKEEEEEEEE
EEEEEEEEEEEEAEAAAAAGHSGSCL

>gi568815582r:51037115_51241930|GENSCAN_predicted_CDS_1|441_bp
gggcatccactgcccatcagcagagaggccgagaagctgatgtgcagggaagtggtggga
aaggaagcctttccagaagtgactgaccgtcacattgggtgcgatccactgccactagaa
ttcaccatgcagggctgtttccaccttttggctgttacaaataatgctgatatgaagtcc
aatgcacaacttcacgtggtttttgtcagttactcttcaaaacaaatctacaagcctggg
cgacaagagcgagactctgtctcaaaaaataagaagaagaaggagaaggagaaggagaag
gagaaggagaaggagaaggagaaggagaagaagaaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagcagaagcagcagcagcagctggg
cacagtggctcatgcctgtaa

>gi568815582r:51037115_51241930|GENSCAN_predicted_peptide_2|170_aa
MAKRGQGTWMKLEAIILSKLTQEQKTKHQMFSFISGSRIMRTHGHREGNIIHRGLLMENL
QPREASVQMHTENLAKAPTDVLLLLLGIIIIAILYKLQHPSPAPGGYSLTCWACCPMSNF
PLSAPAGLCLKFCWLSRAHCRPKGWGVNQQPPSAAFDECVTGAVPCGIKL

>gi568815582r:51037115_51241930|GENSCAN_predicted_CDS_2|513_bp
atggctaaaaggggccaagggacatggatgaagctggaagccatcattctcagcaaacta
acacaggaacagaaaaccaaacaccaaatgttctcattcataagtgggagtcgaataatg
agaacacatggacacagggaggggaacatcatacaccggggcctgttgatggaaaattta
cagcccagagaagccagtgttcaaatgcacactgagaatctagcaaaagcgcccacagac
gtcctcctcctcctccttggcatcatcatcattgcaatcctctataaattgcagcaccca
tcaccagcccctggtggctactcactcacctgctgggcatgctgtccaatgtccaacttc
ccactgtcagcacctgcaggtctttgtcttaagttttgctggctgtccagggctcactgc
aggccaaaaggctggggagttaatcagcagcctccctcagcagcctttgacgagtgtgtg
acgggagctgtcccttgtggaattaagctctag

>gi568815582r:51037115_51241930|GENSCAN_predicted_peptide_3|129_aa
MLLLLLLLLLLQLQALALVPLEQNLSPRPRVKSAAPTQQPVTCLLRQCLHESMDPIEDEF
QNHISHKKFCRKSRVLSEPKDVSIYRMFPGHWLKAIKSAVKVLPSTYTVLQLSCENINEL
PNCVDPKPG

>gi568815582r:51037115_51241930|GENSCAN_predicted_CDS_3|390_bp
atgctgctgctgctcctgttgctgctgctgctacagctccaggcccttgctctggtgcca
ctggagcaaaatctctccccaagaccccgggtgaagagtgctgctccaacacaacaacca
gtcacctgcttgctgaggcaatgtttacatgaaagtatggacccaatcgaggatgaattc
cagaatcacatctcccacaagaaattctgcaggaaatccagggtcctgtctgaacccaaa
gatgtttctatctatcgaatgttccctggtcattggttgaaggccatcaagtcggcggtg
aaagtcttacccagtacttacacagtacttcagcttagctgcgaaaatatcaatgagctg
ccgaactgtgtggaccccaagccaggctga

>gi568815582r:51037115_51241930|GENSCAN_predicted_peptide_4|1525_aa
MGKKLSMAVVLSDVKLSLREVGPLRDTILDNYSLLILLVLAAPGIVFLMLAGAPSQLHHS
LRFSGGKALPALIRRELLPGPRPLESLWEGEEHNTQRGPGCISTVLASSRGLSRIQSLRC
KPTHPVCHTYLLTVYVTVSSADQVTNTCEVIPGSFLLRTRRAPGEKLCGTASSARFLAAC
GAREARTFKKPRLLEKDAGGSKHGHIPGKECASAHKRVRVPGTVWIGDTEKGQPSRPTKS
KDAHVCGRCCAEFFELSDLLLHKKNCTKNQLVLIVNENPASPPETFSPSPPPDNPDEQMN
DTVNKTDQVDCSDLSEHNGLDREESMEVEAPVANKSGSGTSSGSHSSTAPSSSSSSSSSS
GGGGSSSTGTSAITTSLPQLGDLTTLGNFSVINSNVIIENLQSTKVAVAQFSQEARCGGA
SGGKLAVPALMEQLLALQQQQIHQLQLIEQIRHQILLLASQNADLPTSSSPSQGTLRTSA
NPLSTLSSHLSQQLAAAAGLAQSLASQSASISGVKQLPPIQLPQSSSGNTIIPSNSGSSP
NMNILAAAVTTPSSEKVASSAGASHVSNPAVSSSSSPAFAISSLLSPASNPLLPQQASAN
SVFPSPLPNIGTTAEDLNSLSALAQQRKSKPPNVTAFEAKSTSDEAFFKHKCRFCAKVFG
SDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEHLDN
IPTSTGIPYGMSIPPEKPVTSWLDTKPVLPTLTTSVGLPLPPTLPSLIPFIKTEEPAPIP
ISHSATSPPGSVKSDSGGPESATRNLGGLPEEAEGSTLPPSGGKSEESGMVTNSVPTASS
SVLSSPAADCGPAGSATTFTNPLLPLMSEQFKAKFPFGGLLDSAQASETSKLQQLVENID
KKATDPNECIICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLKTHYSVHRAM
PPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPVPDSYSESMESDTGSFDEKNFD
DLDNFSDENMEDCPEGSIPDTPKSADASQDSLSSSPLPLEMSSIAALENQMKMINAGLAE
QLQASLKSVENGSIEGDVLTNDSSSVGGDMESQSAGSPAISESTSSMQALSPSNSTQEFH
KSPSIEEKPQRAVPSEFANGLSPTPVNGGALDLTSSHAEKIIKEDSLGILFPFRDRGKFK
NTACDICGKTFACQSALDIHYRSHTKERPFICTVCNRGFSTKGNLKQHMLTHQMRDLPSQ
LFEPSSNLGPNQNSAVIPANSLSSLIKTEVNGFVHVSPQDSKDTPTSHVPSGPLSSSATS
PVLLPALPRRTPKQHYCNTCGKTFSSSSALQIHERTHTGEKPFACTICGRAFTTKGNLKV
HMGTHMWNSTPARRGRRLSVDGPMTFLGGNPVKFPEMFQKDLAARSGSGDPSSFWNQYAA
ALSNGLAMKANEISVIQNGGIPPIPGSLGSGNSSPVSGLTGNLERLQNSEPNAPLAGLEK
MASSENGTNFRFTRFVEDSKEIVTS

>gi568815582r:51037115_51241930|GENSCAN_predicted_CDS_4|4578_bp
atggggaagaagctgagcatggctgtggtcttgagtgatgttaagcttagcctgagggag
gtggggcctctgagagacacaattcttgataattatagtttattgattctcctggtgtta
gctgcccccggcatcgtcttcctcatgttagctggggcaccttcccagctccatcacagc
ctgcgtttctcaggaggcaaagcactcccagcgctaatccggagagagctgctgcctgga
ccaaggcccctggagtccctctgggagggtgaagaacacaacacacagagaggtcctggt
tgcatctccacggtgctggcatcctccagaggactcagccgcattcagtccttaagatgc
aagcccacgcaccccgtttgccacacatacctgttgacagtttatgtgacagtttcctct
gcagaccaagtaacaaacacgtgtgaagttattcccgggagcttcctgctgcgcacgcgg
cgcgcaccaggagaaaagctttgcgggaccgccagctccgctaggttcctggctgcatgc
ggtgcccgggaggcccggactttcaagaagccaagattgttagagaaggatgcgggcggc
tccaaacacgggcacattccgggaaaggagtgtgcaagtgcacacaaacgcgttcgtgta
cctgggacagtgtggattggagacacagaaaagggtcaaccgagtcgccctactaagagc
aaggatgcccacgtctgtggccggtgctgtgccgagttctttgaattatcagatcttctg
ctccacaagaagaactgtactaaaaatcaattagttttaatcgtaaatgaaaatccagcc
tccccacccgaaaccttctcccccagcccccctcctgataatcctgatgaacaaatgaat
gacacagttaacaaaacagatcaagtggactgcagcgacctttcagaacacaacggactt
gacagggaagagtccatggaggtggaggccccggttgctaacaaaagcggcagcggcact
tccagcggcagccacagcagtaccgccccaagcagcagcagcagcagcagcagcagcagc
ggcggcggcggcagctcctccacaggtacctcagcgatcacaacctctctacctcaactc
ggggacctgacaacactgggcaacttctccgtaatcaacagcaacgtcatcatcgagaac
ctccagagcaccaaggtggcggtggcccagttctcccaggaagcgaggtgcggcggggcc
tctgggggcaagctggccgtcccagccctcatggaacaactcctagctctgcagcagcag
cagatccaccagctgcaattgatcgaacagattcgtcaccaaatattgctgttggcttct
cagaatgcagacttgccaacatcttctagtccttctcaaggtactttacgaacatctgcc
aaccccttgtccacgctaagttcccatttatctcagcagctggcagcagcagctggattg
gcacagagcctcgccagccaatctgccagcattagtggtgtgaaacagctacccccaatc
cagctacctcagagcagttctggcaacaccatcattccatccaacagcggctcttctccc
aatatgaacatattggcagcggcagttaccaccccgtcctctgaaaaagtggcttcaagt
gctggggcctcccatgtcagcaacccagcggtctcatcatcgtcctcaccagcttttgca
ataagcagtttattaagtcctgcgtctaatccacttctacctcagcaagcctccgctaac
tcggttttccccagccctttgcccaacatcggaacaactgcagaggatttaaactccttg
tctgccttggcccagcaaagaaaaagcaagccaccaaatgtcactgcctttgaagcgaaa
agtacttccgatgaggcattcttcaaacacaagtgcaggttctgcgcgaaggtctttggg
agtgacagtgccttgcagatccacttgcgttcccataccggagagaggccattcaagtgc
aacatctgcgggaacaggttctccaccaaggggaatctgaaagtccactttcagcgccac
aaagagaaataccctcatatccagatgaacccctatcctgtgcctgagcatttggacaat
atccccacgagtactggcatcccatatggcatgtccatccctccagagaagccagtcacc
agctggctagacaccaaaccagtcctgcctactctgaccacttcagtcggcctgccgttg
cccccaaccctcccaagcctcatacccttcatcaagacggaagagccagcccccatcccc
atcagccattctgccaccagccccccaggctcagtcaaaagtgactccgggggccctgag
tcagccacaagaaacctaggtgggctcccagaggaagccgaagggtccactctgccaccc
tctggtggcaaaagcgaagagagtggcatggtcaccaactcagtcccgacggcgagcagt
agcgtcctgagctccccagcggcagactgcggccccgcgggcagtgccaccaccttcacc
aaccctttgttgccgctcatgtccgagcagttcaaggccaagtttccttttgggggactc
ctggactcagctcaggcatcagagacgtccaagcttcagcaactggtagaaaacattgac
aagaaggccactgaccccaatgagtgcatcatctgccaccgggttctcagctgccagagc
gccttgaaaatgcactacaggacacacactggggagaggccctttaagtgtaagatctgt
ggccgggctttcaccacgaaagggaatcttaaaacccactacagtgtccatcgtgctatg
cccccgctcagagtccagcattcctgccccatctgccagaagaagttcacgaacgctgtg
gtcctgcagcagcacatccgaatgcatatgggaggccagatccccaacaccccagtcccc
gacagctactctgagtccatggagtctgacacaggttcctttgatgagaaaaattttgat
gacctagacaacttctctgatgaaaacatggaagactgtcctgagggcagcatccctgat
acacctaagtctgcagacgcctcccaagacagcttatcctcttcgcctttgcccctcgag
atgtcgagcatcgctgctttggaaaatcagatgaagatgatcaatgctggcctggcagag
cagctacaggccagcctgaagtcagtggagaatgggtccatcgagggggatgtcctgacc
aatgattcatcctcagtgggtggtgacatggaaagccaaagtgctggcagcccagccatc
tcagagtctacctcttccatgcaggctctgtccccgtccaacagcacgcaggagttccac
aagtcacccagcattgaggagaaaccacagagagcggtcccaagcgagtttgccaatggt
ttgtctcccaccccagtgaatggtggggctttggatttgacatctagtcacgcagagaaa
atcatcaaagaagattctttggggatcctcttcccttttagagaccggggtaaatttaaa
aacactgcttgtgacatttgtggcaaaacatttgcttgtcagagtgccttggacattcac
tatagaagtcataccaaagagagaccatttatttgcacagtttgcaatcgtggcttttcc
acaaagggtaatttgaagcagcacatgttgacacatcagatgcgagatctgccatcccag
ctctttgagcccagttccaaccttggccccaatcagaactcagcggtgattcccgccaac
tcgttgtcatctctcatcaagacagaggtcaacggcttcgtgcatgtttctcctcaggac
agtaaggacacccccaccagtcacgtcccgtctgggcctctgtcttcctctgccacatcc
ccagttctgctccctgctctgcccaggagaactcccaagcagcactactgcaacacatgt
ggcaaaaccttctcctcatcgagtgccctgcagattcacgagagaactcacactggagag
aaaccctttgcttgcactatttgtggaagagctttcacgactaaaggcaatcttaaggta
cacatgggcactcacatgtggaatagcacccctgcacgacggggtcggcggctctctgtg
gatggccccatgacatttctaggaggcaatcccgtcaagttcccagaaatgttccagaag
gatttggcggcaagatcaggaagtggggatccttccagcttctggaatcagtatgcagca
gcgctctccaacgggctggcgatgaaggccaacgagatctccgtcattcagaacggtggc
atccctccaattcctggaagcctcggcagtgggaacagctcacctgttagtgggctgacg
ggaaacctggagaggctccagaactcagagcccaatgctcccctggccggcctggagaaa
atggcaagcagtgagaacggaaccaacttccgcttcacccgcttcgtggaggacagcaag
gagatcgtcacgagttaa

>gi568815582r:51037115_51241930|GENSCAN_predicted_peptide_5|105_aa
MPGRGLQLLPAKAAAAAQAFGSPGFIHLTMPLVKVLTRPSKHSGPQGPALHECYPQSYLK
KGIHAPQQFPASCTLRRRDAETSAPTPYISFISKCDSEAGDIEFQ

>gi568815582r:51037115_51241930|GENSCAN_predicted_CDS_5|318_bp
atgcccggccggggcttacagctgttacctgctaaagctgcagcagcagcccaggccttt
gggtctccagggttcatacacttaactatgcctctggttaaggttcttacaagaccaagc
aagcactcaggtcctcaaggcccagctctccacgaatgctaccctcaatcttacctcaag
aaaggaatccatgctccacagcagttcccagcaagctgcactcttcgaaggcgggatgct
gaaacctctgcccccaccccctacattagctttatatccaaatgtgactcggaggctggt
gacatcgagttccaataa

>gi568815582r:51037115_51241930|GENSCAN_predicted_peptide_6|397_aa
MSRNSLRSPPEEDAGTVLPVQPTEVSSPPGELCLRLKGSKRGSSLLSCQQITTSSLFITI
TTITPITSTTISTSTNSTSTTTIFINISTTIFTSTTSITISTATTTTSTTTTISMTVFTS
TTSTTTRITTTIFTTHLHYHLHHHHHHLISTTIFTSNTTTTAATTISIIISTTITTTSTT
IITTSNTSTAITTTSTSTTIPPPPPSPPFPPPSPSPPPPSHHLHHHHHLHHNLHLTTFTT
TIIFITISTTIFTSTTTTTTTIFITISTTSPPPSPPHPPLSSPSLPPSPPSSSPHPPLSS
PSPPPPIPLPLLPPSLPTISITIFTTTTISTIITTSTTSTTITTITTTTITITITSTTIT
ISITTNSIFTTTTSTTISTTISITSTTTCTGVIVPSL

>gi568815582r:51037115_51241930|GENSCAN_predicted_CDS_6|1194_bp
atgagcagaaacagcctgaggtccccaccagaagaagatgctggcactgtgcttcctgta
cagcctacagaagtctcaagtccacctggggaactttgtctcagactgaaaggttcaaag
agaggatcttctctgttaagctgccagcaaatcaccacctcctccttgttcatcaccatc
accaccatcacccccatcacctccaccaccatctctacttctaccaactccacctccacc
accacaattttcatcaacatctccaccaccatctttacctccaccacctccatcaccatt
tccactgccaccaccaccacctcaaccaccaccaccatttccatgactgtcttcacctct
accacttccaccactacccgcatcaccaccaccatctttaccacccatctccattaccac
cttcaccaccatcaccaccacctcatctccacaaccattttcacttccaacaccaccacc
accgctgccaccaccatctccattatcatctccaccaccatcaccaccacctccaccaca
atcattaccacctccaacaccagcactgccatcaccaccacctccacctccaccaccatc
ccaccacctccaccatcaccaccatttccaccaccatcaccatcacctccaccaccatcc
caccacctccaccatcaccaccatctccaccacaatcttcacctcacaacattcaccacc
accatcatcttcatcaccatctctaccaccatcttcacctccaccaccactaccaccacc
accatcttcattaccatctccaccacatcaccaccaccatcaccaccacatccaccacta
tcatcaccatctctaccaccatctccaccatcatcttcacctcacccaccactatcatca
ccatcaccaccacctccaataccactaccactactgccaccatcactaccaactatctct
atcaccatctttaccaccaccaccatctccaccatcatcaccacctctaccaccagcacc
accatcaccaccatcaccaccaccaccatcaccatcaccatcacctccaccaccatcacc
atctccatcaccaccaactccatcttcaccactaccacgagcaccaccatatctaccacc
atctccatcaccagcacaaccacctgcactggggtgatcgtgccttctttgtga