GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:39:18

Sequence gi568815582f:25117204_25328489 : 211286 bp : 44.20% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1195   1328  134  0  2   81   47    80 0.279   2.64
 1.02 Intr +  11272  11320   49  1  1  153   22    18 0.139   0.38
 1.03 Intr +  13940  13970   31  1  1   99   80    18 0.373  -0.20
 1.04 Intr +  15199  15320  122  2  2  130   95    52 0.838  10.31
 1.05 Intr +  21552  21641   90  2  0   76   77    23 0.029   0.19
 1.06 Intr +  34629  34713   85  2  1   40   94    40 0.001  -0.81
 1.07 Intr +  43899  44001  103  1  1   81   42   105 0.380   4.43
 1.08 Intr +  47395  47515  121  1  1   81   98    79 0.676   8.70
 1.09 Intr +  51909  52010  102  2  0  129   71   141 0.995  16.87
 1.10 Intr +  53511  53602   92  2  2   61   80   102 0.957   5.49
 1.11 Intr +  57734  57831   98  2  2  103   70   106 0.446   9.95
 1.12 Term +  74994  75145  152  1  2   69   37   133 0.521   4.37
 1.13 PlyA +  76337  76342    6                               1.05

 2.00 Prom +  94630  94669   40                              -2.66
 2.01 Init +  96020  96079   60  1  0   78   47    68 0.687   2.95
 2.02 Intr +  99995 100242  248  1  2   90   94   257 0.948  22.76
 2.03 Intr + 104254 104380  127  1  1  102   98   138 0.997  16.88
 2.04 Intr + 107159 107373  215  1  2   60   92   273 0.874  22.41
 2.05 Intr + 109865 109999  135  2  0   91   63   117 0.988   9.18
 2.06 Term + 111241 111289   49  1  1  100   48    78 0.622   1.78
 2.07 PlyA + 111704 111709    6                               1.05

 3.08 PlyA - 113782 113777    6                               1.05
 3.07 Term - 123535 122613  923  2  2   89   45   422 0.941  30.36
 3.06 Intr - 127073 126582  492  0  0   41   91   393 0.199  27.87
 3.05 Intr - 130187 129504  684  0  0   67   83   516 0.320  40.54
 3.04 Intr - 134832 134706  127  0  1   14   82    92 0.650   1.45
 3.03 Intr - 135834 135743   92  1  2   95   88    19 0.849   2.31
 3.02 Intr - 138189 138003  187  0  1   80   95   148 0.976  13.96
 3.01 Init - 139924 139526  399  1  0   86   94   347 0.876  31.77
 3.00 Prom - 154588 154549   40                              -1.26

 4.07 PlyA - 156374 156369    6                               1.05
 4.06 Term - 159669 159554  116  1  2   67   43    66 0.295  -1.27
 4.05 Intr - 162736 162627  110  0  2   72   38    94 0.051   2.73
 4.04 Intr - 181232 181161   72  1  0   71   80    41 0.006   0.12
 4.03 Intr - 198032 197928  105  1  0   38  110    60 0.501   2.53
 4.02 Intr - 206769 206702   68  0  2  104   67    64 0.502   3.60
 4.01 Init - 210649 210602   48  1  0   97  110    -1 0.690   3.95

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  26399  26232  168  0  0   42   86    93 0.805   4.42
S.002 Intr -  35074  34913  162  2  0   84   26   116 0.884   4.95


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:25117204_25328489|GENSCAN_predicted_peptide_1|392_aa
VSAFTPHSLLSACFGYGGAVLDPANAEVSQTQDAALMEHWFLEWGFAVSIGYWHDPYIQH
FGILALKLDPVGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKHVVQYSKR
SIPSLIVTAHKLFGSPCDNFTKAGKHSLLLEVNNRHFEGGAKGGGIYAQPDGHILDSKRY
AVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMF
INYEQVNMGDRFGQIMIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDMMELY
NRLPRAEVSRIESLEFLDEMELLEQLMRHYCLCWATKGGNELGLKHDSVSIKLQPATCSR
EAQLFLQETLEKLHPETLSEIPVIRMFVDLGL

>gi568815582f:25117204_25328489|GENSCAN_predicted_CDS_1|1179_bp
gtgagtgcattcactccacattctttgttgagcgcctgcttcggttatggaggtgctgtc
ctagaccctgccaatgcagaagtgagccaaacacaggatgcagctcttatggagcattgg
ttcctggagtgggggtttgcagtaagcattggctactggcatgacccttacatacagcac
tttggaatcttggctctcaagttggatcctgtaggatattttgctcgagtccatggtgtc
agtcagcttataaaggcatttctacggaagacagaatgtcattgtcaaattgtcaacctt
ggggcaggcatggataccaccttctggagattaaagcacgttgtgcagtattcaaaacgc
agtataccttcccttattgttacagctcacaagctctttggatccccgtgtgataatttt
actaaggctgggaagcacagcctcctgctagaagtcaacaacagacactttgaaggaggg
gcaaaaggaggaggaatttatgctcagccagatggacacatactggattcaaagagatat
gccgttattggagcagatctccgagacctgtctgaactggaagagaagctaaagaaatgt
aacatgaatacacaattgccaacactcctgatagctgaatgtgtgctggtttacatgact
ccagagcagtccgcaaacctcctgaagtgggcagccaacagttttgagagagccatgttc
ataaactacgaacaggtgaacatgggtgatcggtttgggcagatcatgattgaaaacctg
cggagacgccagtgtgacctggcgggagtggagacctgcaagtcattagagtcacagaaa
gaacggctcctgtcgaatgggtgggaaacagcatcggccgtcgacatgatggagttgtac
aacaggttacctcgagctgaagtgagcaggatagaatcacttgaattcctggatgaaatg
gagctgctggagcagctcatgcggcattactgcctttgctgggcaaccaaaggaggaaat
gagcttggattgaaacatgattcagtttccataaaattacagccagccacatgctcaaga
gaggcacagctgttcctgcaggagaccctggagaagcttcacccagaaaccctcagtgag
atccctgtgattcgcatgttcgtggacctgggtttgtag

>gi568815582f:25117204_25328489|GENSCAN_predicted_peptide_2|277_aa
MEVAWIPESPFGDEPVMDYYIAMCEPEFGNDKAREPSVGGRWRVSWYERFVQPCLVELLG
SALFIFIGCLSVIENGTDTGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGG
LNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIIL
TTLLALAVCMGAINEKTKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHW
NFHWIYWLGPLLAGLLVGLLIRCFIGDGKTRLILKAR

>gi568815582f:25117204_25328489|GENSCAN_predicted_CDS_2|834_bp
atggaagtggcctggatccctgagtcaccatttggagacgagcctgtcatggactattat
atagccatgtgtgagcctgaatttggcaatgacaaggccagggagccgagcgtgggtggc
aggtggcgagtgtcctggtacgaacggtttgtgcagccatgtctggtcgaactgctgggc
tctgctctcttcatcttcatcgggtgcctgtcggtcattgagaatgggacggacactggg
ctgctgcagccggccctggcccacgggctggctttggggctcgtgattgccacgctgggg
aatatcagtggtggacacttcaaccctgcggtgtccctggcagccatgctgatcggaggc
ctcaacctggtgatgctcctcccgtactgggtctcacagctgctcggggggatgctcggg
gctgccttggccaaggcggtgagtcctgaggagaggttctggaatgcatctggggcggcc
tttgtgacagtccaggagcaggggcaggtggcaggggcgttggtggcagagatcatcctg
acgacgctgctggccctggctgtatgcatgggtgccatcaatgagaagacaaagggccct
ctggccccgttctccatcggctttgccgtcaccgtggatatcctggctgggggccctgtg
tctggaggctgcatgaatcccgcccgtgcttttggacctgcggtggtggccaaccactgg
aacttccactggatctactggctgggcccactcctggctggcctgcttgttggactgctc
attaggtgcttcattggagatgggaagacccgcctcatcctgaaggctcggtga

>gi568815582f:25117204_25328489|GENSCAN_predicted_peptide_3|967_aa
MAVALDSQIDAPLEVEGCLIMKVEKDPEWASEPILEGSDSSETFRKCFRQFCYEDVTGPH
EAFSKLWELCCRWLKPEMRSKEQILELLVIEQFLTILPEKIQAWAQKQCPQSGEEAVALV
VHLEKETGRLRQQVSSPVHREKHSPLGAAWEVADFQPEQVETQPRAVSREEPGSLHSGHQ
EQLNRKRERRPLPKNARPSPWVPALADEWNTLDQEVTTTRLPAGSQEPVKDVHVARGFSY
RKSVHQIPAQRDLYRDFRKENVGNVVSLGSAVSTSNKITRLEQRKEPWTLGLHSSNKRSI
LRSNYVKEKSVHAIQVPARSAGKTWREQQQWGLEDEKIAGVHWSYEETKTFLAILKESRF
YETLQACPRNSQVYGAVAEWLRECGFLRTPEQCRTKFKSLQKSYRKVRNGHMLEPCAFFE
DMDALLNPAARAPSTDKPKEMIPVPRLKRIAISAKEHISLVEEEEAAEDSDDDEIGIEFI
RKSEIHGAPVLFQNLSGVHWGYEETKTFLDILRETRFYEALQACHRKSKLYGAVAEQLRE
CGFLRTPEQCRTKFKSLQKSYRKVKNGHVLESCAFYKEMDALINSRASAPSPSTPEEVPS
PSRQERGGIEVEPQEPTGWEPEETSQEAVIEDSCSERMSEEEIVQEPEFQGPPGLLQSPN
DFEIGSSIKEDPTQIVYKDMEQHRALIEKSKRVVSQSTDPSKYRKRECISGRQWENLQGI
RQGKPMSQPRDLGKAVVHQRPFVGKRPYRLLKYGESFGRSTRLMCRMTHHKENPYKCGVC
GKCFGRSRSLIRHQRIHTGEKPFKCLDCGKSFNDSSNFGAHQRIHTGEKPYRCGECGKCF
SQSSSLIIHQRTHTGEKPYQCGECGKSFTNSSHFSAHRRVHTGENPYKCVDCEKSFNNCT
RFREHRRIHTGEKPYGCAQCGKRFSKSSVLTKHREVHVREKPLPHPPSLYCPENPHKGKT
DEFRKTF

>gi568815582f:25117204_25328489|GENSCAN_predicted_CDS_3|2904_bp
atggctgtcgccctcgactctcagatcgacgcgcccctggaggttgagggatgcctaata
atgaaggtggaaaaggaccctgagtgggcatcagagcccattctggaaggatcggatagc
tctgagaccttccgcaaatgcttcaggcaattctgttatgaggatgtgactggaccccat
gaagctttcagtaaactctgggaactttgctgccggtggctgaagccagaaatgcgttcc
aaggagcaaatacttgagctgctggtgattgagcagtttctcaccattttacccgagaag
attcaggcttgggcacagaagcagtgtccgcaaagtggagaggaagcggtggccctggta
gtgcatttggagaaagagactggaagactaagacagcaggtcagcagtcccgtgcaccgg
gagaagcactccccacttggagcagcgtgggaggtggcagacttccagccagagcaggtg
gagacccaacccagggcggtgtctcgggaggaacctggaagcctccactcaggacaccag
gaacagctgaaccgaaagcgagaacgtcggcccttacccaagaatgctcggccttctccc
tgggttcctgcccttgctgatgaatggaataccctagatcaggaagtgacaaccacacgg
cttcctgctgggtcccaggaaccagtgaaagatgtccacgtggccagaggcttttcctac
agaaagagtgtgcatcagattcctgcccaaagggacctctaccgggatttcaggaaggag
aatgttgggaacgtggtctccctgggaagtgcagtgtctacatctaacaagataacccgg
ttggaacagagaaaggagccatggactctaggtctgcattcctctaacaagagaagtatc
ctacgaagcaactacgtcaaggaaaagtcagttcatgctattcaggtccctgcaaggagt
gcaggaaaaacatggagagagcagcagcagtggggtttagaagatgaaaagatagcaggt
gtgcattggagctatgaggaaacaaagactttcctggcaattctcaaagagtctcgcttt
tatgaaacacttcaggcctgtccccgaaatagccaagtgtatggtgctgtggctgaatgg
ttgcgagaatgtggcttccttagaaccccagaacagtgtcgaaccaagttcaaaagtctc
cagaaaagctatcgaaaggtgagaaatggccacatgctagaaccctgcgccttctttgag
gacatggatgctttgttgaaccctgcagcccgtgctccgtccactgataaaccaaaggag
atgatacctgtccccagactgaagagaattgccatcagtgctaaggaacacatcagcttg
gtggaggaggaggaagctgcagaagattctgatgatgatgaaataggcatcgaatttatc
cgcaagtctgaaatccatggtgcccctgtcttgtttcagaatctcagtggcgtgcactgg
ggctatgaagaaaccaagacttttcttgatatcctccgtgagactcggttttatgaagcg
cttcaagcctgtcatcggaagagcaaattgtatggggctgtagctgaacagcttcgagag
tgcggcttcctccggacaccagaacagtgccgaaccaagttcaaaagccttcagaagagt
taccgcaaggtgaaaaatggccacgtgctagagtcctgcgcgttctacaaggagatggat
gccctgattaactctcgggcatctgctccttcccccagcaccccagaggaagtcccatca
ccttcaaggcaagaaagagggggtattgaggttgaaccccaggaacctacaggctgggaa
cctgaagagacctcacaggaggcagtaatagaagactcttgcagtgagagaatgagcgag
gaggaaattgtgcaagagccagagttccagggacctccaggtctactgcagagcccaaat
gattttgaaatcggaagtagcatcaaggaggatccaacacagatagtatataaggacatg
gaacagcatagggcattaatagaaaagtctaaaagagttgtttcccagagtaccgacccc
agcaaatatcgcaaaagggaatgcatctcaggaagacaatgggaaaatcttcaaggaatt
agacagggaaagccgatgtctcagcctagagatttagggaaagccgttgtgcatcagagg
ccttttgtggggaagagaccctacagacttctcaaatatggagaaagctttggaaggagc
actcgtctgatgtgccggatgacccaccacaaggagaatccttacaagtgtggtgtctgt
gggaagtgctttggtagaagcaggagcctgatcagacaccaaagaatccacacaggcgaa
aaaccttttaaatgtcttgactgtggaaaaagctttaatgactcctcaaattttggtgcc
caccagagaatccacacaggagagaaaccctacagatgcggagagtgtggaaaatgcttt
agtcagagctctagtcttattatacatcagagaacgcacaccggtgagaagccctatcag
tgtggagagtgtgggaaaagtttcaccaacagttctcatttcagcgcccaccggagagtt
cacactggggagaatccctacaaatgtgtggactgtgaaaaaagtttcaataactgtacg
agatttcgagaacatcggagaatacacactggagagaagccctatggatgtgcccagtgt
ggcaaacgtttcagtaagagttctgttcttaccaaacatcgggaagttcatgtgagagaa
aagcctctgccacaccctccatctctgtattgccctgagaacccacataagggaaagact
gatgaatttaggaaaactttttga

>gi568815582f:25117204_25328489|GENSCAN_predicted_peptide_4|172_aa
MVEGEGGAKSHLTWQQTHTQSISKPGPLCLPNPAKNDESKIAEEEFLTFISSQKHPLKQP
PTHKNTFTRAKKFSYECHLHLNPELLLWELQMAHVRMRSSGETSEMKAINAQILGQLMVS
QVALLILAGLLSCPELAGDSKSDVIFGHKLPSAVHFWINSHHYHLKKQTLSW

>gi568815582f:25117204_25328489|GENSCAN_predicted_CDS_4|519_bp
atggtggaaggtgaaggaggagcaaagtcacatcttacatggcagcagacccatacccaa
tccatcagcaagcctggtcccctctgcctgccaaatcctgccaaaaatgatgaaagcaag
atagcagaagaagagtttctgacattcatctcctcacagaaacatccacttaaacaacca
ccaacacataaaaatacctttacaagagctaagaaattcagctatgaatgccaccttcac
ctcaaccctgaactcctcttatgggagctgcagatggcccacgtaagaatgaggtcctct
ggggagaccagtgagatgaaagcaatcaatgcacagatcttggggcagctgatggtcagc
caggtggctctgctgatcctggctggcttgctctcgtgtccagagcttgctggagacagc
aagagtgatgtcatttttgggcacaaactgccctctgctgttcacttttggattaacagc
caccattatcacctgaagaagcaaacgctgtcctggtag