GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:33:03

Sequence gi568815583f:80020345_80237625 : 217281 bp : 42.41% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4946   5003   58  1  1  125  101    26 0.926   5.14
 1.02 Term +   6247   6449  203  2  2  101   42   139 0.996   7.17
 1.03 PlyA +   7769   7774    6                               1.05

 2.05 PlyA -   8637   8632    6                               1.05
 2.04 Term -  11523  11403  121  2  1   95   43    83 0.689   1.47
 2.03 Intr -  12656  12602   55  0  1   77  115    21 0.599   0.82
 2.02 Intr -  13252  13101  152  0  2   80   33   106 0.624   3.19
 2.01 Init -  14058  13943  116  0  2   84   47   102 0.689   5.43
 2.00 Prom -  19287  19248   40                              -0.85

 3.03 PlyA -  19892  19887    6                               1.05
 3.02 Term -  39083  38516  568  1  1   65   32   243 0.539   9.30
 3.01 Init -  55979  55909   71  2  2   60   85    39 0.235   1.38
 3.00 Prom -  78416  78377   40                              -5.05

 4.00 Prom +  84582  84621   40                              -4.15
 4.01 Init + 100001 100154  154  1  1   92  119   -14 0.839   2.29
 4.02 Intr + 101368 101476  109  2  1   28  110    86 0.533   3.22
 4.03 Intr + 102356 102456  101  2  2   73    9   138 0.174   3.23
 4.04 Intr + 110836 110949  114  2  0   61   95    41 0.181   1.60
 4.05 Intr + 113434 113615  182  2  2   39   66   123 0.294   3.87
 4.06 Term + 117136 117255  120  0  0   98   33   155 0.334   8.49
 4.07 PlyA + 118018 118023    6                               1.05

 5.00 Prom + 121907 121946   40                              -7.05
 5.01 Init + 125674 125688   15  0  0   64   81     4 0.099  -2.18
 5.02 Intr + 131193 131314  122  2  2   60   82   120 0.331   6.97
 5.03 Intr + 132682 132791  110  1  2   65   60   107 0.585   4.61
 5.04 Intr + 136477 136682  206  2  2  104   37    65 0.598   1.00
 5.05 Intr + 137716 137826  111  0  0   95   91   156 0.885  16.26
 5.06 Intr + 139412 139533  122  1  2   78   69    83 0.612   3.77
 5.07 Intr + 140066 140217  152  2  2   94   44    38 0.148  -1.11
 5.08 Intr + 141902 141992   91  0  1  100   56    97 0.298   5.83
 5.09 Intr + 147708 147805   98  0  2  117   74   153 0.963  15.53
 5.10 Intr + 148080 148271  192  1  0   86   93    66 0.799   5.44
 5.11 Intr + 151818 151904   87  1  0   60   36   112 0.025   2.22
 5.12 Intr + 152670 152800  131  1  2   89  115    89 0.037  11.19
 5.13 Intr + 152882 153103  222  1  0  -21   81   157 0.024   1.50
 5.14 Intr + 154672 154747   76  0  1  109   95    78 0.072   8.77
 5.15 Intr + 159297 159481  185  1  2   76   82    65 0.604   3.29
 5.16 Intr + 159780 159881  102  2  0   66  117    72 0.675   7.35
 5.17 Intr + 160698 160815  118  2  1   38   94    90 0.770   3.72
 5.18 Intr + 160974 160997   24  1  0  131   65    51 0.729   4.18
 5.19 Term + 165786 165865   80  1  2  123   50    90 0.799   5.65
 5.20 PlyA + 165969 165974    6                               1.05

 6.14 PlyA - 166250 166245    6                               1.05
 6.13 Term - 168455 168318  138  2  0   92   42    83 0.579   1.08
 6.12 Intr - 169147 168979  169  0  1   54  103    79 0.304   5.03
 6.11 Intr - 173566 173241  326  1  2   56   98   119 0.164   3.35
 6.10 Intr - 173951 173816  136  1  1   11  107    87 0.419   2.55
 6.09 Intr - 177592 177448  145  2  1   43   62    72 0.149  -1.48
 6.08 Intr - 177843 177674  170  2  2   55   45   116 0.106   2.67
 6.07 Intr - 181346 181151  196  0  1   58   39   143 0.116   3.95
 6.06 Intr - 181670 181363  308  1  2   97   22   250 0.351  14.47
 6.05 Intr - 181797 181743   55  1  1  106   73   101 0.368   7.52
 6.04 Intr - 188434 188277  158  0  2   55   38   122 0.079   2.63
 6.03 Intr - 189330 189166  165  2  0   89   43   175 0.176  11.25
 6.02 Intr - 191004 190818  187  1  1   78   48   110 0.412   3.83
 6.01 Init - 216269 216221   49  2  1   94   58    50 0.194   1.77

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 102356 102473  118  2  1   73   39   112 0.810   1.83
S.002 Term - 152112 151781  332  1  2   42   39   223 0.890   6.63
S.003 Intr - 154879 154635  245  0  2  116   80   168 0.823  15.02
S.004 Init - 155211 155087  125  0  2   58   53   102 0.889   3.18


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:80020345_80237625|GENSCAN_predicted_peptide_1|86_aa
MGPSSCRKTSSGVPLNLRYGILGRVTTSPAGSWYISQQGWASISERTRPLCWNQSSGTIR
ILAEGNKSASCSESASLKASELPGRI

>gi568815583f:80020345_80237625|GENSCAN_predicted_CDS_1|261_bp
atgggaccgtctagttgcaggaaaacaagctcaggggtcccactgaatctacgttatggg
atattaggaagagtaactacctccccagctggaagctggtatatctcgcagcagggctgg
gcttctatttcagaaagaacacggccactttgctggaaccagagcagtggcacaatccga
atcctggcggagggcaacaagtcagcttcatgctcagaatctgcttctctgaaggcctct
gaattaccaggaagaatctaa

>gi568815583f:80020345_80237625|GENSCAN_predicted_peptide_2|147_aa
MEWESEKRLGFRQHAFSGLVPGVLVSRISVATEENLGGGPAVLACVQTCKFSKAHRLQCD
QLSQFAQNWFGFSIVPGNPSSAGLRSLGLKTRSQKGRMNGETDHFEKRQWVGCWDSIGKQ
VSVELIMEEEGDNNQSIISSVISAIMA

>gi568815583f:80020345_80237625|GENSCAN_predicted_CDS_2|444_bp
atggagtgggaaagtgagaaacggctgggtttcaggcagcatgcattttctggcttggtc
cctggggtcttggtgtcccgtatttcagttgcaacagaagagaatttaggaggcggacca
gctgtcctggcgtgtgtgcagacctgcaagttcagcaaagcccacagacttcagtgtgac
caactgtcccagtttgcccagaactggtttggttttagcattgtcccaggaaacccctct
agtgcaggactgaggtccttggggctgaaaactaggagccaaaagggcagaatgaatggt
gaaactgatcattttgaaaagcggcagtgggttgggtgctgggactctattggtaaacaa
gtttctgtggagctcattatggaggaggagggagacaataaccagtcaattatatccagt
gtgataagtgctataatggcctaa

>gi568815583f:80020345_80237625|GENSCAN_predicted_peptide_3|212_aa
MKKNQNDNQILAWVAVSPICCDFCVPCSTALSGALPAAVSLPPIATGRRLRGAAETLRAW
LCRFRYLCHLAGNGVSLSWTEAPKRVALHLPLVQEGILSFCLPMQAGASVCKRKVRAQGA
YWKAVLCPVLNWDLEIEARREACMHTCAIHTCTGTSTPSSSLFQKHGVSSHLRGARWAAA
LELGVIGRMAPPEVFQPSFGLTSITSRKYVTL

>gi568815583f:80020345_80237625|GENSCAN_predicted_CDS_3|639_bp
atgaagaagaatcagaatgacaatcagattctggcttgggtggcagtatcacccatttgc
tgtgacttttgtgtcccttgctccactgccctctctggggcgcttcccgccgcggtttct
ctacctccaatagctacgggaaggcgattaagaggtgccgcggagactttaagggcttgg
ttatgtaggttcaggtacctttgccacctcgcagggaatggcgtgtccctgtcttggact
gaggcaccaaaaagagttgcactccacctgccacttgtgcaggaaggaattctgagcttc
tgtcttcccatgcaggccggcgcctcagtctgcaagcgcaaagtccgagctcagggcgca
tactggaaagcagttctctgccctgtcctgaactgggacttggaaatagaagcaagacga
gaagcgtgcatgcacacgtgtgcaatacatacatgcacaggcacaagcacccccagttcc
agcctgttccaaaagcacggggtcagttcccacctgcgtggtgcacgctgggctgctgcg
ctggaactaggggtgataggcagaatggctccccctgaagtttttcagccttcgttcggg
ctcacgagcatcacgagcaggaagtacgtgacactttag

>gi568815583f:80020345_80237625|GENSCAN_predicted_peptide_4|259_aa
MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTVGFMIRTAITYKAANPSLEGK
KINTSCQSFGCTTGTLKQYEPFFVIGYINALSLKSESILLGLNAGVEMFTVVYTVTQMYT
IALTITKPMLLRKSEKKIQ

>gi568815583f:80020345_80237625|GENSCAN_predicted_CDS_4|780_bp
atggctcaagaaactaatcacagccaagtgcctatgctttgttccactggctgtggattt
tatggaaaccctcgtacaaatggcatgtgttcagtatgctataaagaacatcttcaaaga
cagaatagtagtaatggtagaataagcccacctgcaacctctgtcagtagtctgtctgaa
tctttaccagttcaatgcacagatggcagtgtgccagaagcccagtcagcattagactct
acatcttcatctatgcagcccagccctgtatcaaatcagtcacttttatcagaatctgta
gcatcttctcaattggacagtacatctgtggacaaagcagtacctgaaacagaagatgtg
caggcttcagtatcagacacagcacagcagccatctgaagagcaaagcaagtctcttgaa
aaaccgaaacaaaaaaagaatcgctgtttcatgtgcaggaagaaagtgggacttactgtt
gggtttatgatcagaactgccattacctataaagctgctaacccgagtcttgaagggaaa
aagataaacaccagctgccagtcttttggttgtacaacaggaacgcttaaacaatatgaa
ccctttttcgtgatcggttacattaatgctttgtccctgaaatcagaaagtatcttgcta
ggtttgaatgccggtgtggaaatgtttactgtggtgtacaccgttactcagatgtacaca
attgctcttacaattacaaagccgatgctgctgagaaaatcagaaaagaaaatccagtag

>gi568815583f:80020345_80237625|GENSCAN_predicted_peptide_5|747_aa
MQKTKDLQGTLAQTIVYFSRFQPASWLFKSVPESFTPTITQRHTLRPAAVPGALQHVLHP
GGRGFRLPHPQPALRRLLDQRRRHSLKHKFEASRLCLHLRQQAAALVTPFWKLLTGGDSF
LPSAGVWGPGSEMWSKGLPCTFPEWKATWIQPRPRIGVAIGDQILDLSIIKHLFTGPVLS
KHQDVFNQPTLNSFMGLGQAAWKEARVFLQNLLSVSQARLRDDTELRKCAFISQASATMH
LPATIGECSLFTKIRTEQLRGPRGLARCFGSASVWRVPAGDYTDFYSSRQHATNVGIMFR
DKENALMPNWLHLPVGYHGRASSVVVSGTPIRRPMGQMKPDDSTSAAALCPHLAIRRTVD
PYYLQILYLRIHNYLLIFICKSRINIHRAFVGMCGHAQGSETFELPGPGNRLGEPIPISK
AHEHIFGMVLMNDWSARDIQKWEYVPLGPFLGKSFGTTVSPWVVPMDALMPFAVPNPKQA
CRPSGGKLCAHGMPTAECLGVPGHDYFQAARASFSLVVSLALAQFLEKTQNFVTLRILQD
PGDLASWQEESLQDPRPLPYLCHDEPYTFDINLSVNLKAPLPSVHPKARHGRMGARALLT
RSLCCGVDLDSPNTGLEGVPRAEWSVVHKGMLQAEGLSSKYMYWTMLQQLTHHSVNGCNL
RPGDLLASGTISGPEPENFGSMLELSWKGTKPIDLGNGQTRKFLLDGDEVIITAMATRDF
KWYCQGDGYRIGFGQCAGKVLPALLPS

>gi568815583f:80020345_80237625|GENSCAN_predicted_CDS_5|2244_bp
atgcagaagactaaggatcttcagggaacccttgcccagactatcgtctacttttctaga
tttcagccggcatcctggctgtttaaaagtgtacctgaatcattcacaccaacaataaca
caacgacacactctccggcccgcagccgtgccgggtgctcttcagcatgtccttcatccc
ggtggccgaggattccgacttccccatccacaacctgccctacggcgtcttctcgaccag
aggcgacgtcatagtttgaagcacaagtttgaagcttctaggctttgtttgcatttgagg
cagcaggcagctgcacttgtgaccccattttggaagttgcttactggtggtgactccttc
ttgccttcagctggggtgtggggaccagggtcagagatgtggtccaagggtctgccctgc
acattccctgaatggaaagccacttggattcagccaagaccgaggataggtgtggccatt
ggcgaccagatcctggacctcagcatcatcaagcacctctttactggtcctgtcctctcc
aaacaccaggatgtcttcaatcagcctacactcaacagcttcatgggcctgggtcaggct
gcctggaaggaggcgagagtgttcttgcagaacttgctgtctgtgagccaagccaggctc
agagatgacaccgaacttcggaagtgtgcattcatctcccaggcttctgccacgatgcac
cttccagccaccataggtgagtgcagtctcttcaccaagataagaacggagcagcttcgt
gggccaagagggctggccaggtgctttggttctgcatctgtgtggagggtccctgctgga
gactacacagacttctattcctctcggcagcatgctaccaacgtcggaatcatgttcagg
gacaaggagaatgcgttgatgccaaattggctgcacttaccagtgggctaccatggccgt
gcctcctctgtcgtggtgtctggcaccccaatccgaaggcccatgggacagatgaaacct
gatgactccacatcggcagccgctctgtgtccccacctggccatcagaaggacagttgat
ccttattacttgcagattctgtatttgagaattcacaactacttgctaatatttatttgt
aagtccagaattaatattcacagagcttttgtgggcatgtgtggacatgcgcagggcagt
gaaacatttgagctgcctggccctggaaacagattgggagagccgatccccatttccaag
gcccatgagcacatttttggaatggtccttatgaacgactggagtgcacgagacattcag
aagtgggagtatgtccctctcgggccattccttgggaagagttttgggaccactgtctct
ccgtgggtggtgcccatggatgctctcatgccctttgctgtgcccaacccgaagcaggca
tgcagaccatcaggagggaagctctgtgcccacggcatgcccacagcagagtgcctggga
gttcctggccacgattacttccaggcagccagggcatcattctcccttgtggtttccctg
gccctggcacagttcttggagaaaacacagaattttgtaaccttaagaatcttgcaagac
ccgggggatctggccagttggcaggaggagtccctgcaggaccccaggcccctgccgtat
ctgtgccatgacgagccctacacatttgacatcaacctctctgttaacctgaaagctcca
ttgcccagtgtccatcccaaggcccggcatgggagaatgggagcgagggctttgctcacg
agaagcctctgctgtggtgtggacttagattctcccaatacgggactggagggtgttccc
agggcagagtggagtgttgtacacaagggcatgttgcaggctgagggactgagcagtaag
tacatgtactggacgatgctgcagcagctcactcaccactctgtcaacggctgcaacctg
cggccgggggacctcctggcttctgggaccatcagcgggccggagccagaaaacttcggc
tccatgttggaactgtcgtggaagggaacgaagcccatagacctggggaatggtcagacc
aggaagtttctgctggacggggatgaagtcatcataacagctatggctacccgggacttc
aagtggtactgccagggggatggttaccgcatcggctttggccagtgtgctggaaaagtg
ctgcctgctctcctgccatcatga

>gi568815583f:80020345_80237625|GENSCAN_predicted_peptide_6|733_aa
MAFHHVAQAGLDLLTSEPADDCTWSTRILLTLSEFIMSLQRTVYPHSEKWRALSVPSSSY
FQELVGTSQELALTFWHLLSMFGFFIVSYGFLTAFGRTLFHLDLLQPNLTPSRFDKYTGS
AQRPLSLRVTHSPSLFIYEIEGDGLDPCFQSMVQGILEVLWMSKVESAYHTNDGDTAGEG
VRNGSIGWSEQQALGAGVADKREQRGGKWYQSNPRRRRSSPQSLPRDGGAHARARLCRRR
QRADLGLLRLPLPLPCRDDHPLCQGHHGPLQRHPHIHLGGAAPGRLRHSGCGDWTWRSVG
GCAPGCIPCHPTEARNESGHPGKQKVQLSPLSPPSSTSVECPGAVGVATMDQPGEKSPGP
GPRRLGFQCGESLSGLWDNEDTSVVGHLGKYNLEGANSPRDKWGSRNMQNQEFRVMVTRR
NVASKDAQTVAEMSTCSYRVERSVSPCLIKFPELQRLNQSKRGWPCFQTPSEENYKVCLV
TGEGELLLIICIDCDAMETISNMTVLKLQYALESPGRLILTQLDPPGFCISQTGDLNSDV
IRTTCPASLKSLKGAQFNCPEDAELLLVYYFVTKRQFQGLPWGHFYNNSPHSMGPIVTLN
TNDFIHQDLSGKFKRFNEEGLILGQFSEGQVSPLCNRDRGSQPLEPLVPALAPGSSVPLS
LAPLPPYNKTSSGPHLARNTSGLTPPGQTLGQVHWVFPTSPSPLSALNAQQGDKRVISTD
DTSILWCQWEQVD

>gi568815583f:80020345_80237625|GENSCAN_predicted_CDS_6|2202_bp
atggcgttccaccatgttgcccaggctggtctcgatctcctgacctcagaaccagctgat
gattgcacatggtcaactcggattcttcttaccctgagtgaatttataatgtcgctgcag
cgtactgtttatccccacagtgagaagtggcgtgctctctcagtcccttcatcttcctat
tttcaggagctggtgggcaccagccaggaactggctctcaccttctggcatttactgtct
atgtttggattcttcatcgtgtcctatggctttctcacagcatttggcaggactcttttc
cacttggatctgctacaacccaaccttacaccttcacgctttgacaagtacactgggtca
gcccagcggccactttctttgagggtcactcattcgcctagtctcttcatctatgaaata
gagggagatgggttagatccatgttttcaaagcatggtccaaggaatcctagaggttttg
tggatgtccaaagtggagagtgcataccacactaatgatggtgatactgctggagagggt
gtgaggaatggttctatagggtggtctgagcagcaagctctcggtgcaggggtagcagat
aagagggagcagaggggtggaaaatggtaccagtcaaacccgaggcggaggaggagcagc
ccgcagtcgctgccgcgagatggaggagcccacgcccgagcccgtctatgtcgacgtaga
caaagggctgaccttggcctgcttcgtcttcctctgcctcttccttgtcgtgatgatcat
ccgctgtgccaaggtcatcatggacccttacagcgccatccccacatccacctgggagga
gcagcacctggacgactgaggcacagcggctgtggggactggacctggcgctctgtgggt
ggctgtgccccaggatgcatcccctgccatcccacagaggcaaggaatgaatctggccac
ccagggaaacagaaggtgcagcttagccctctcagccctccctcgagcaccagcgtggaa
tgcccgggtgccgtgggtgtcgcaaccatggaccagccaggggaaaagagccctggacca
ggacccaggaggctggggttccagtgtggggagtccctcagtggtctttgggacaatgaa
gacacctcggtggtgggtcacttagggaaatacaatctggaaggggccaacagtcccaga
gacaagtggggtagcagaaatatgcagaaccaagagttcagagtgatggtcactagaaga
aatgtggcctctaaggatgctcagacagttgctgaaatgtctacatgttcttatcgagtt
gaaagatcagtgtctccctgtctcattaaatttccagaacttcagaggctaaatcaatcc
aaaaggggctggccctgctttcaaacaccaagtgaagagaactacaaagtttgtcttgta
acaggtgaaggtgaactccttctgattatctgtattgattgtgatgcaatggaaactatt
tctaatatgacagttctcaaacttcagtatgcattagaatcaccgggacggctcattcta
acacagctggacccacctggcttttgcataagccagacaggtgacttaaatagtgatgtg
attagaaccacctgtcctgcatctctcaagtctttgaagggggcacaattcaattgccct
gaagatgcagaattgcttttggtttactattttgtcacaaagaggcagttccaagggctt
ccatggggccacttctacaataatagccctcactccatgggtccaattgtcacccttaat
accaatgactttattcatcaggatttaagcggcaaattcaaaaggttcaatgaagagggt
ttaattttgggacaattttcagagggacaggtaagtcccctctgcaatagggacaggggc
tcccagcccctggaacccctagtgcctgccctggccccgggcagtagcgtgcccctgagc
ctagctcccttgccaccctacaataaaaccagcagtgggccccatcttgccagaaacacc
tctggactgactcctcctggtcagactctggggcaggtccattgggttttcccaacatca
ccaagccctttaagtgcattaaatgcccaacaaggggataagcgtgtgatctctactgat
gacaccagcattctctggtgccagtgggaacaagtggattaa