GENSCAN 1.0	Date run: 24-Oct-119	Time: 21:45:48

Sequence gi568815583r:75855930_76109295 : 253366 bp : 39.74% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1229   1234    6  1  0   87  116    10 0.885   4.06
 1.02 Intr +   3949   4053  105  0  0   63  103    60 0.897   4.49
 1.03 Intr +  13022  13081   60  1  0   85   50   126 0.491   6.51
 1.04 Intr +  15113  15212  100  1  1   65   98    76 0.871   5.06
 1.05 Intr +  15308  15495  188  0  2   60   49    65 0.803  -1.71
 1.06 Intr +  17499  17639  141  2  0  102  101   146 0.997  16.93
 1.07 Intr +  27437  27495   59  1  2  119  110    45 0.917   6.56
 1.08 Intr +  47798  47949  152  2  2   59    6   138 0.019   1.59
 1.09 Intr +  48081  48174   94  1  1   53   81    93 0.131   3.20
 1.10 Intr +  48562  48737  176  1  2   74   77   205 0.189  16.66
 1.11 Intr +  49649  49677   29  0  2   86   72    27 0.024  -2.18
 1.12 Intr +  57274  57361   88  0  1  108   84    72 0.268   7.42
 1.13 Intr +  61301  61465  165  0  0   67   97    44 0.083   2.21
 1.14 Intr +  73955  74120  166  0  1  132   53    98 0.961   8.80
 1.15 Intr +  76756  77101  346  1  1   77   83   323 0.425  25.17
 1.16 Intr +  78531  78550   20  2  2   71  115     5 0.158  -4.01
 1.17 Term +  84546  84693  148  0  1   76   37   128 0.167   2.89
 1.18 PlyA +  84747  84752    6                               1.05

 2.05 PlyA -  85845  85840    6                               1.05
 2.04 Term -  89119  89100   20  2  2  110   49    14 0.248  -2.80
 2.03 Intr - 100082 100003   80  1  2   78   79    93 0.738   5.68
 2.02 Intr - 106045 105899  147  0  0   79  111    93 0.968   9.13
 2.01 Init - 116517 116273  245  0  2   85   11   165 0.457   5.75
 2.00 Prom - 116571 116532   40                              -4.95

 3.02 PlyA - 117191 117186    6                               1.05
 3.01 Sngl - 120534 120142  393  0  0   78   42   382 0.840  28.59
 3.00 Prom - 122904 122865   40                              -4.95

 4.07 PlyA - 123497 123492    6                               1.05
 4.06 Term - 131255 131175   81  2  0   65   39    68 0.637  -3.69
 4.05 Intr - 131782 131621  162  1  0   -7  100   172 0.888   8.15
 4.04 Intr - 134553 134461   93  0  0   36   85   105 0.278   4.24
 4.03 Intr - 141850 141766   85  0  1   75   39    36 0.047  -3.70
 4.02 Intr - 149880 149815   66  2  0  120   55    87 0.220   5.70
 4.01 Init - 158491 158247  245  1  2   64   87   150 0.878   9.75
 4.00 Prom - 158545 158506   40                              -5.65

 5.05 PlyA - 158662 158657    6                               1.05
 5.04 Term - 162458 162058  401  0  2   55   48   297 0.878  16.69
 5.03 Intr - 196248 196138  111  1  0   90  111     8 0.040   2.73
 5.02 Intr - 204235 204135  101  0  2   69   45   127 0.064   5.33
 5.01 Init - 218043 217955   89  0  2   48  109    83 0.377   6.56
 5.00 Prom - 237669 237630   40                              -3.65

 6.02 PlyA - 238936 238931    6                               1.05
 6.01 Sngl - 240012 239578  435  0  0   55   41   231 0.822  11.12
 6.00 Prom - 240885 240846   40                              -6.15

 7.03 PlyA - 241061 241056    6                               1.05
 7.02 Term - 242053 241745  309  1  0    7   39   232 0.363   4.28
 7.01 Init - 243091 243002   90  1  0  112   36    56 0.694   3.34
 7.00 Prom - 244356 244317   40                              -5.05

 8.00 Prom + 245732 245771   40                              -9.05
 8.01 Init + 247058 247302  245  1  2   81   68   129 0.342   7.46
 8.02 Intr + 250114 250321  208  1  1   77   48   119 0.063   4.96
 8.03 Intr + 252258 252362  105  2  0   83    1    98 0.034   0.09
 8.04 Intr + 253044 253254  211  2  1   99  100    88 0.044   8.66

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 225217 225336  120  0  0   93   33   153 0.834   7.79


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:75855930_76109295|GENSCAN_predicted_peptide_1|680_aa
MKLRQQLKWLICELCSLYNLPKHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEVFL
REGDVSGSQDNSGERVSRQTREQRSLHHRQALRRFFPISVDGTYNRVLYRDIPLPRDGQE
ADAFLLSQLQEACLPLILIFLSTDPLRVSGWGTDIEDLDHYEMKEEEPISGKKSEDEGIE
KENLAILEKIRKTQRQDHLNDNFPFDPPFVRVVLPVLSGGIRPNLKNEENSSERITERST
PRSTGSRRGNAPALPRPPSPSSRKWRGRLLNPRSTFVLSNLAEVVERVLTFLPAKALLRV
ACVCRLWRECVRRVLRTHRSVTWISAGLAEAGHLEGHCLVRVVAEELEASSKGCHAQSFA
DSVQILPVVPNVRILPHTVLYMADSETFISLEECRGHKRVTPMGSGSNRPQEIEIGESGF
ALLFPQIEGIKIQPFHFIKDPKNLTLERHQLTEVGLLDNPELRVVLVFGYNCCKVGASNY
LQQVVSTFSDMNIILAGGQVDNLSSLTSEKNPLDIDASGVVGLSFSGHRIQSATVLLNED
VSDEKTAEAAMQRLKAANIPEHNTIGFMFACVGRGFQYYRAKGNVEADAFRKFFPSVPLF
GFFGNGEIGCDRIVTGNFILRKCNEDSRTLARNRKTHPEFHVESEGIPNSQVSLEKEEQI
GGLKPAEFKTYYNATVIKTM

>gi568815583r:75855930_76109295|GENSCAN_predicted_CDS_1|2043_bp
atgaagcttcgtcagcaattgaagtggttgatatgtgaactctgcagtttatataacctt
cctaagcacctggatgttgagatgctagatcaaccactacccacgggtcagaatgggaca
acagaagaagtgacttcagaagaagaggaagaagaagaagagatggctgaagtgtttctc
cgagagggggatgtgtcagggtcacaagacaatagtggggagagggtcagcagacaaaca
cgtgaacaaaggtctttgcatcatagacaagccctaaggcggtttttccctatctcagta
gatggaacgtacaatcgggttttataccgagacattccattgcccagggacgggcaggag
gcagatgccttcctcttgtctcaactgcaagaggcatgccttcctcttatactaatcttc
ctcagcacagaccctttacgggtgtcaggctgggggacggatatagaagacttagatcac
tatgagatgaaggaagaagagcctattagtgggaaaaagtcagaggatgaaggaattgaa
aaagaaaatttggcaatattagagaaaattaggaagactcaaaggcaagaccatttaaat
gataactttccatttgatcctccatttgttcgagtggtgttacctgttctctcaggaggc
attagacccaatctcaaaaatgaagaaaacagttccgagcgtattacggaacggagtaca
cctcggagtacgggctccagacgagggaacgcaccggcgttgccacgcccaccttccccg
tccagccggaagtggcgcggacgcctgctcaacccgcggagcaccttcgtgttgagtaac
ctggcggaggtggtggagcgtgtgctcaccttcctgcccgccaaggcgttgctgcgggtg
gcctgcgtgtgccgcttatggagggagtgtgtgcgcagagtattgcggacccatcggagc
gtaacctggatctccgcaggcctggcggaggccggccacctggaggggcattgcttggtt
cgcgtggtagcagaggagcttgaggcaagtagcaaggggtgtcatgcacagtcatttgca
gactcggttcagattttgccagttgtcccaaatgttcgcatcttaccacatacagttctt
tacatggctgattcagaaactttcattagtctggaagagtgtcgtggccataagagagtg
actccaatgggatcaggtagcaatcgacctcaggaaatagaaattggagaatctggtttt
gctttattattccctcaaattgaaggaataaaaatacaaccctttcattttattaaggat
ccaaagaatttaacattagaaagacatcaactcactgaagtaggtcttttagataaccct
gaacttcgtgtggtccttgtctttggttataattgctgtaaggtgggagccagtaattat
ctgcagcaagtagtcagcactttcagtgatatgaatatcatcttggctggaggccaggtg
gacaacctgtcatcactgacttctgaaaagaaccctctggatattgatgcctcgggtgtg
gttggactgtcatttagtggacaccgaatccagagtgccactgtgctcctcaacgaggac
gtcagtgatgagaagactgctgaggctgcgatgcagcgcctcaaagcggccaacattcca
gagcataacaccattggcttcatgtttgcatgcgttggcaggggctttcagtattacaga
gccaaggggaatgttgaggctgatgcatttagaaagttttttcctagtgttcccttattc
ggcttctttggaaatggagaaattggatgtgatcggatagtcactgggaactttatattg
aggaaatgtaatgaggacagtagaacacttgcaagaaatagaaaaacccatcctgaattt
catgtggaatctgaagggatcccaaatagccaagtcagtcttgagaaagaagaacaaatt
ggaggacttaaacctgcagagtttaaaacttactataatgctacagtaatcaaaacaatg
tga

>gi568815583r:75855930_76109295|GENSCAN_predicted_peptide_2|163_aa
MGKDFVTKTPKAMATKAKIDKWDLIKLKSFCTAKETIIRVNRQPTECEKIFAIYPSDKGL
ISRIHKELKQIYKKKTNNPIKKCVENYTGARCEEVFLPGSSIQTKSNLFEAFVALAVLVT
LIIGAFYFLCRKGHFQRASSVQYDINLVETSSTSAHHKCSVTW

>gi568815583r:75855930_76109295|GENSCAN_predicted_CDS_2|492_bp
atgggcaaagacttcgtgactaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcatcagagtg
aacaggcaacctacagaatgtgagaaaatttttgcaatctatccatctgacaaagggcta
atatccagaatccataaggaacttaaacaaatttacaagaaaaaaaccaacaaccccatc
aaaaagtgcgttgaaaactatacaggagctcgttgtgaagaggtttttctcccaggctcc
agcatccaaactaaaagtaacctgtttgaagcttttgtggcattggcggtcctagtaaca
cttatcattggagccttctacttcctttgcaggaaaggccactttcagagagccagttca
gtccagtatgatatcaacctggtagagacgagcagtaccagtgcccaccacaaatgttca
gtgacatggtaa

>gi568815583r:75855930_76109295|GENSCAN_predicted_peptide_3|130_aa
MRKNQCKKAENSKSQNASSPPKDHNSLPAREQNWMENEFDKLTEVGFRRWVITNSFKLNE
HVLTQYKEAKNLEKRLEELLTGRTSVEKNISDLMELKNIAREFRKAYTGINRQIDQVEER
ISDVEDQLMK

>gi568815583r:75855930_76109295|GENSCAN_predicted_CDS_3|393_bp
atgaggaaaaaccagtgcaaaaaggctgaaaattccaaaagccagaacgcctcttctcct
ccaaaggatcacaactccctgccagcaagggaacaaaactggatggagaatgagtttgac
aaattgacagaagtaggcttcagaaggtgggtaataacaaactccttcaagctaaacgag
catgttctaacccaatacaaggaagctaagaaccttgaaaaaaggttagaggaactgcta
actggaagaaccagtgtagagaagaacataagtgacctgatggagctgaaaaacatagca
cgagaatttcgtaaagcatacacgggtatcaatagacaaatcgatcaagtggaagaaagg
atatcagatgttgaagatcaattgatgaaataa

>gi568815583r:75855930_76109295|GENSCAN_predicted_peptide_4|243_aa
MGKDFVTKTPKAMATKAKTDKWDLIKPKSFCTAKETLVRVNRQPTEWEKIFAIYSSEKGL
ISRIYKELKQIYKKKTNNPIKNLHENENDNNEDLYDDLLPLNEYDLGGHVLQVSGPRDGE
GLPDWHWALDSSTVDNRQYGTVIPERRRTSLEIPLIFRAPFLETRWLKHQKLLRFLEDGK
SKVKVLADSVGGEGPLSGLQMDIFVLHTYMAERGRAEASSELVIEIYFFPGDRKAFIAHF
LLL

>gi568815583r:75855930_76109295|GENSCAN_predicted_CDS_4|732_bp
atgggcaaagacttcgtgactaaaacaccaaaagcaatggcaacaaaagccaaaactgac
aaatgggatctaattaaaccaaagagcttctgcacagcaaaagaaactctcgtcagagta
aacaggcaacctacagaatgggagaaaatttttgcaatctattcatctgagaaagggcta
atatccagaatctacaaggaacttaaacaaatttacaagaaaaaaaccaacaaccccatc
aaaaatctacacgaaaatgaaaatgacaacaatgaagacctttatgatgatctacttcca
cttaatgaatatgaccttggaggccatgttctccaggtgtcagggccaagagatggagaa
gggctgcctgactggcattgggcattagacagtagtacagttgacaacaggcagtacggg
acagtgatccctgagagaaggagaacaagcttagagatccctctaatcttccgggctccc
ttcctggagacaagatggcttaaacatcagaaacttctccgatttctggaggatgggaag
tccaaggtcaaggtgctagctgattcagttggtggtgagggccctctttctggtttgcag
atggacatcttcgtgctgcatacttacatggcagagagagggagagcggaagcctcatct
gagttagtgattgaaatatacttctttcctggggaccgcaaagctttcatagctcacttc
ctgctgttgtga

>gi568815583r:75855930_76109295|GENSCAN_predicted_peptide_5|233_aa
MCHKLQSSNIPLSVVNFNGLISTRTGQEARGMKVSGKIPALPSTHPANLDRSPHPPPRPQ
DSGMATNSIKAEEIVVNHKREPVSSLFCNLEEKFSSKDRSGSHSSPAREQNWMENEFDKS
TELGFRRWVITNSSKLKEDILTQCKEAKNHEKRLEELLTGISSLEKNISDLIELKNIARE
LQQAYTSINSQIDQVEERISEIEDQLNEIKCEDKIREKRLKRNKRASKKYGTM

>gi568815583r:75855930_76109295|GENSCAN_predicted_CDS_5|702_bp
atgtgtcacaaactacagtcctcaaacatcccattgagtgtggtcaatttcaacggcctc
atctccacaagaactggacaagaggccagggggatgaaggtcagcggcaagatcccagcc
cttccgagcacgcatcctgcaaaccttgaccggtccccccaccccccgccccgaccacaa
gactcgggcatggccacaaattctattaaagcagaagaaatagtggtgaaccataaaaga
gaaccagtttcctctctattctgcaatttagaggaaaaattttcatccaaggacagatca
ggatcacactcctcgccagcaagggaacaaaactggatggagaatgagtttgacaaatcg
acagaattaggcttcagaaggtgggtaataacaaactcctccaagctaaaggaggatatt
ctaactcaatgcaaggaagctaagaaccatgaaaaaaggttagaggaattactaactgga
ataagcagtttagagaagaacataagtgacctgattgagctgaaaaacatagcacgagaa
cttcaacaagcatacacaagtatcaatagccaaatcgatcaagtggaagaaaggatatca
gagattgaagatcaacttaatgaaataaagtgtgaagacaagattagagaaaaaagattg
aaaagaaacaaacgagcctccaagaaatatgggactatgtga

>gi568815583r:75855930_76109295|GENSCAN_predicted_peptide_6|144_aa
MQTTTIREYYKYLYANKLENLEEMDKFLDTYTLPSLNQEEVESLNTPITSSEIEAVINSL
PTKKSPGPDGFTAEFYQRYKEELVPFLLKLFRSIEKEGILPNSFYEASIILIPKPGRDTI
KKENFRPISLMTIDAKILNKILAN

>gi568815583r:75855930_76109295|GENSCAN_predicted_CDS_6|435_bp
atgcaaactaccaccatcagagaatactataaatacctctacgcaaataaactagaaaat
ctagaagaaatggataaattcctggacacatacaccctcccaagtctaaaccaggaagaa
gtcgaatccctgaatacaccaataacaagttctgaaattgaggcagtaattaatagccta
ccaaccaagaaaagcccaggaccagatggattcacagccgaattctaccagaggtacaag
gaggagctggtaccattccttctgaaactattccgatcaatagaaaaagagggaatcctc
cctaactcattttatgaggccagcatcatcctgataccaaaacctggcagagacacaata
aaaaaagaaaatttcaggccaatatccctgatgacaatcgatgcgaaaatcctcaataaa
atactggcaaactga

>gi568815583r:75855930_76109295|GENSCAN_predicted_peptide_7|132_aa
MEPSKVRSTSLKFPLPAQQLSEMDPGHSSLNSVEKNINDLMELKNIPRELHEAYTSFNSQ
INQVEERIPVIEDQLNEIKREDKIREKRIKRNKQSLQEIWDYVKRPNLRLIGVSESDREN
GTKLENTLQDII

>gi568815583r:75855930_76109295|GENSCAN_predicted_CDS_7|399_bp
atggagcccagcaaagtaagatccactagtttgaaattcccactgccagcacagcagctg
tctgagatggacccgggacactctagcttgaacagtgtagagaagaacataaatgacctg
atggagctgaaaaatataccacgagaacttcatgaagcatacacaagtttcaatagccaa
atcaatcaagtggaagaaaggataccagtgattgaagatcaacttaatgaaataaagaga
gaagacaagattagagaaaaaagaataaaaaggaataaacaaagcctccaagaaatatgg
gactatgtgaaaagaccaaatctacgtttgattggtgtatctgaaagtgacagggagaat
ggtaccaagttggaaaacactcttcaggatattatctag

>gi568815583r:75855930_76109295|GENSCAN_predicted_peptide_8|257_aa
MGGGKRGASHLTWVSAMWRTGKGGSRETGVYGSNRPRDSGGLDQDERGGEQWYNLGGIMK
VKLTYSLTDRMWGMKGRSQPGRFPDAQAPSLAGSGFSQTSPLCSSSLCTVSVFPSASHPP
APAKNKYSSGTCHVHGMVGESKIRTEGAHSLEGSTNLREGHTNLQPVAACHAWMPGIGAW
LLRHPRTVGSKAVSYSPVYLPLVPPERPHELWKAHYLGPGHLRRSLYQMFLGSKAQWNEP
QVGTRKTSAGSRPEVQX

>gi568815583r:75855930_76109295|GENSCAN_predicted_CDS_8|771_bp
atgggaggtggtaaacggggagcaagtcatctgacttgggtttctgctatgtggaggaca
ggcaaagggggaagcagggagacaggagtctatggcagtaatcggccgagagatagtggg
ggtttggaccaggatgagagaggtggtgagcagtggtacaatttgggaggtattatgaag
gtaaaactgacatactcgctaacagatcggatgtggggcatgaaagggaggagtcagcca
ggcagattcccagatgcacaggcccccagtttagcgggatcaggcttttcacaaacaagc
cctctgtgttcatcctccctctgcactgtttctgtgttcccctctgcctcccatccccca
gcccctgcaaagaataagtactcatcaggtacctgccacgtgcacggcatggtgggagaa
tcaaagatccgcactgaaggagctcacagtctggagggcagcacgaatctccgagagggt
cacactaacctgcagccagtggctgcctgccatgcctggatgcctggcattggagcctgg
ttgctgaggcaccctcggactgttggaagcaaggctgtatcttactctcctgtgtatctc
cctttggtcccacccgagaggccacatgagctgtggaaagcacattacctgggaccgggt
cacctgagaagatctttgtatcagatgttcctgggatcaaaggcacagtggaatgagccc
caagttggaaccagaaagacctcagcaggtagcagacctgaagtgcaagnn