GENSCAN 1.0	Date run:  8-Nov-116	Time: 03:43:35

Sequence gi568815583r:74855987_75056583 : 200597 bp : 49.07% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   3932   3927    6                               1.05
 1.02 Term -  14939  14874   66  2  0   71   44    57 0.422  -2.46
 1.01 Init -  17509  17213  297  1  0   75   80   262 0.916  19.32
 1.00 Prom -  20868  20829   40                              -6.26

 2.00 Prom +  24059  24098   40                              -4.36
 2.01 Init +  34088  34232  145  1  1  102   48   103 0.672   6.30
 2.02 Intr +  34541  34668  128  0  2   55   83   125 0.580   9.10
 2.03 Intr +  35393  35593  201  1  0   96   98   176 0.996  18.88
 2.04 Intr +  36675  36816  142  2  1   88   89   171 0.999  17.13
 2.05 Intr +  37152  37334  183  1  0   73   38   184 0.948  11.66
 2.06 Intr +  40166  40339  174  0  0   62   83   262 0.926  23.01
 2.07 Intr +  41025  41233  209  1  2   79  105   123 0.982  11.90
 2.08 Term +  41526  41744  219  2  0   98   43   153 0.976   8.84
 2.09 PlyA +  43432  43437    6                               1.05

 3.08 PlyA -  43653  43648    6                               1.05
 3.07 Term -  45542  45433  110  0  2   62   48    61 0.534  -1.83
 3.06 Intr -  46077  45964  114  1  0  120  100    23 0.946   7.12
 3.05 Intr -  46704  46618   87  1  0   50   86    77 0.892   3.64
 3.04 Intr -  48726  48524  203  2  2   94   65    65 0.800   3.73
 3.03 Intr -  49245  49168   78  2  0  123  109   104 0.999  14.67
 3.02 Intr -  50379  50292   88  1  1   81   14   100 0.993   0.93
 3.01 Init -  50814  50601  214  0  1  107   66   134 0.962  10.03
 3.00 Prom -  51882  51843   40                              -5.96

 4.07 PlyA -  52550  52545    6                               1.05
 4.06 Term -  67784  67671  114  2  0   71   40   114 0.845   3.47
 4.05 Intr -  70901  70780  122  0  2   96   86    65 0.992   7.31
 4.04 Intr -  73246  73130  117  2  0   35   86   130 0.929   7.94
 4.03 Intr -  81621  81463  159  1  0   41   45    94 0.416   0.36
 4.02 Intr -  82050  81929  122  2  2   75   82   143 0.643  12.54
 4.01 Init -  87101  86953  149  2  2   76   43    52 0.179  -0.94
 4.00 Prom -  96111  96072   40                              -5.86

 5.05 PlyA -  98454  98449    6                               1.05
 5.04 Term - 100730  99998  733  1  1   -6   47   892 0.774  68.64
 5.03 Intr - 105770 105701   70  0  1   71  100    41 0.890   1.84
 5.02 Intr - 108306 108254   53  2  2   80  119    27 0.904   3.55
 5.01 Init - 109200 109193    8  0  2   95   81     0 0.794   0.52
 5.00 Prom - 110510 110471   40                              -6.16

 6.00 Prom + 117725 117764   40                              -2.46
 6.01 Init + 120345 120503  159  2  0   84   63    50 0.284   1.96
 6.02 Intr + 139589 139687   99  1  0   34  109    75 0.003   4.51
 6.03 Intr + 146270 146338   69  1  0   40   92    57 0.123   0.68
 6.04 Intr + 155806 155860   55  0  1  127  110    25 0.727   7.15
 6.05 Intr + 156691 156819  129  2  0   61   56   152 0.971   9.97
 6.06 Intr + 160607 160763  157  0  1   59  108   177 0.999  15.87
 6.07 Intr + 161884 161985  102  1  0  105   99   102 0.999  12.29
 6.08 Intr + 162408 162549  142  0  1   85   88   186 0.518  18.66
 6.09 Term + 162803 162997  195  1  0  140   46   138 0.985  12.21
 6.10 PlyA + 165484 165489    6                               1.05

 7.00 Prom + 175937 175976   40                              -6.16
 7.01 Init + 181312 181344   33  0  0   79   84    25 0.526   1.07
 7.02 Intr + 187455 187550   96  2  0   98   78   139 0.997  14.11
 7.03 Intr + 188400 188630  231  2  0  113   30   250 0.619  19.67
 7.04 Intr + 192567 192735  169  2  1   81   98   308 0.939  30.62
 7.05 Term + 193164 193249   86  1  2   49   43   131 0.748   2.52
 7.06 PlyA + 193735 193740    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:74855987_75056583|GENSCAN_predicted_peptide_1|120_aa
MWTEAECPPTALLWAGRGGGGGGRSDPGAVIGPRPRGRASRLRQNRCLAPGSGGSTRSAA
GSGCPEAAAFAEFARWPPITMSAFDTNPFADPVDVNPFQLLSFLQVSEKSLKESFLSFTA

>gi568815583r:74855987_75056583|GENSCAN_predicted_CDS_1|363_bp
atgtggacggaagccgaatgcccacccaccgcactattgtgggctgggcggggggggggg
gggggggggcggagcgaccccggtgccgtcatagggccacgccctcgggggagggcatcg
cgcctgcgccagaaccgctgcctcgctcccggaagtggagggtctacacgaagcgccgct
gggtctgggtgcccggaggcagcagcgttcgcggagttcgcccgctggcccccgatcacc
atgtcggctttcgacaccaaccccttcgcggacccagtggatgtaaaccccttccagctt
ttaagtttcctgcaggtgtcagagaagtccttgaaggagtccttcctgtcattcacagca
tga

>gi568815583r:74855987_75056583|GENSCAN_predicted_peptide_2|466_aa
MAAPRGEPLAGVSASVFVERVLGTTPGIIGQVESAPGIPRKDGWVPGRVFPLSCAVQQYA
WGKMGSNSEVARLLASSDPLAQIAEDKPYAELWMGTHPRGDAKILDNRISQKTLSQWIAE
NQDSLGSKVKDTFNGNLPFLFKVLSVETPLSIQAHPNKELAEKLHLQAPQHYPDANHKPE
MAIALTPFQGLCGFRPVEEIVTFLKKVPEFQFLIGDEAATHLKQTMSHDSQAVASSLQSC
FSHLMKSEKKVVVEQLNLLVKRISQQAAAGNNMEDIFGELLLQLHQQYPGDIGCFAIYFL
NLLTLKPGEAMFLEANVPHAYLKGDCVECMACSDNTVRAGLTPKFIDVPTLCEMLSYTPS
SSKDRLFLPTRSQEDPYLSIYDPPVPDFTIMKTEVPGSVTEYKVLALDSASILLMVQGTV
IASTPTTQTPIPLQRGGVLFIGANESVSLKLTEPKDLLIFRACCLL

>gi568815583r:74855987_75056583|GENSCAN_predicted_CDS_2|1401_bp
atggccgctccgcgaggtgagccattggctggggtgtcggcgagtgtgttcgtggagcgc
gtcctggggacgactcccggcattatcggccaggttgagtccgctcctggcattccgcgg
aaagatgggtgggtgccgggcagagtattcccactttcctgtgcggtgcagcagtatgcc
tgggggaagatgggttccaacagcgaagtggcgcggctgttggccagcagtgatccactg
gcccagatcgcagaggacaagccttatgcagagttgtggatggggactcacccccgaggg
gatgccaagatccttgacaaccgcatctcacagaagaccctaagccagtggattgctgag
aaccaggacagcttgggctcaaaggtcaaggacacctttaatggcaacctgcccttcctc
ttcaaagtgctctcagttgaaacacccctgtccatccaggcacaccctaacaaggagctg
gcagagaagctgcacctccaggctccgcagcactaccccgatgccaaccacaagccagag
atggccattgccctcacccccttccagggcttgtgtggcttccggccagttgaggagatt
gtaacctttctaaagaaggtgcctgagtttcagttcctgattggagatgaggcagcaaca
cacctgaagcagaccatgagccatgactcccaggctgtggcctcctctctgcagagctgt
ttctcccacctgatgaagagtgagaagaaggtggtggtggaacagctcaacctgttggtg
aagcggatctcccagcaagcggctgccggaaacaacatggaggacatctttggggagctt
ttgctacagctgcaccagcagtacccaggtgatatcggctgctttgccatctacttcctg
aacctgcttaccctgaagcctggggaggccatgtttctggaggccaacgtaccccatgcc
tacctgaaaggagactgcgtggagtgcatggcgtgttcagacaacacagttcgtgctggc
ctgacacccaagttcattgatgtgccaaccctgtgtgaaatgctcagctatacccctagc
tccagcaaggacaggctctttctcccaacacggagtcaggaagacccctacctctcaatc
tatgacccccctgtaccagacttcaccattatgaagacggaggtccctggctctgtcact
gaatacaaggtcttggcactggactctgccagcatcctcctgatggtacaggggacagta
atagccagcacacccacaacccagacaccaatccctctgcaacgtggtggcgtgctcttc
attggggccaatgagagtgtctcactgaagcttactgagccgaaggacctgctgatattc
cgtgcctgctgtctgctgtaa

>gi568815583r:74855987_75056583|GENSCAN_predicted_peptide_3|297_aa
MATAEPSGRALRLSTPGPRPSGARDRAPGAAGPPSGQIGNRALRLGERTPAAVEKRGPYM
VTRAPSIQAKLQKHRDLAKAVLRRKGMLGASPNRPDSSGKRSVKFNKGYTALSQSPDENL
VSLDSDSDGELGSRYSSGYSSAEASPEHLSVQGQAAGSITTTAKCLFGARCEHSTVPDFW
SVLRSSTLPSSPGGAHGLFNMLLLLVLSWGLFFLYPPVDITLQGCTCLTMTGIIAGCLMI
QQDPGFQNPWTWGIPNWSNRPDSSGHSMGLTGYSGLGFKQTSGCDTASFSPQPKQQK

>gi568815583r:74855987_75056583|GENSCAN_predicted_CDS_3|894_bp
atggcgaccgcggagcccagcgggcgcgcgttgcggttgtctaccccgggaccccggccc
agcggggctcgggaccgcgcgccgggagctgcggggccaccctccgggcagatcggtaat
agagccctccgtctgggggagcgcacccccgcggccgtggaaaagcgggggccatacatg
gtgacgcgcgcaccctccattcaagccaagctgcagaagcaccgggacctggccaaggcc
gttctgcggagaaaaggcatgctgggggcctcgccgaaccgcccagactcttcagggaaa
aggtcagtgaagtttaacaagggctatactgctcttagccagagtccagatgaaaacctg
gtgtccctcgactctgacagtgatggggagctgggatccagatactcctccgggtattca
tctgcagaggcaagtccagaacacctttctgtgcagggccaggctgcaggcagcattacc
accactgccaaatgcttgtttggtgcccgctgtgagcacagcactgtgccagacttctgg
tctgttctacgatcttccactctgccctcttcccccggtggagcccatggcctcttcaac
atgctcctgctgctggtgctgtcttggggactcttcttcctgtaccctccagtagacatt
accctccaaggttgcacctgtctaactatgacagggatcatagcaggttgcttaatgata
cagcaggatcctggcttccagaatccctggacctggggcatccccaactggtccaaccgt
ccggattcttctggtcacagcatgggccttactggatactcaggattgggctttaagcag
acctctgggtgtgacacagcctctttcagcccccagcccaaacagcagaaatag

>gi568815583r:74855987_75056583|GENSCAN_predicted_peptide_4|260_aa
MTFLSHQKSSCCVLKKEEEAKVQVWLLQRDSEGFQGRKWQEEIKDPEDLDPRAAIAVMLG
AALRRCAVAATTRADPRGLLHSARTPGPAVAPTLRPPDREWPPPACSASAKVTLSLRARR
LGSEDTIYFRMGHTIILFNQAFLAIQSVRCYSHGSQETDEEFDARWVTYFNKPDIDAWEL
RKGINTLVTYDMVPEPKIIDAALRACRRLNDFASTVRILEVVKDKAGPHKEIYPYVIQEL
RPTLNELGISTPEELGLDKV

>gi568815583r:74855987_75056583|GENSCAN_predicted_CDS_4|783_bp
atgacatttctgagccatcagaagtccagctgttgtgttttaaaaaaagaagaagaagca
aaagtccaggtgtggcttctccagagggacagcgaaggatttcaaggtaggaaatggcag
gaagagataaaagaccctgaagaccttgacccgcgcgccgccatcgccgtcatgctgggc
gccgctctccgccgctgcgctgtggccgcaaccacccgggccgaccctcgaggcctcctg
cactccgcccggacccccggccccgccgtggcgccgaccctgcggccacctgaccgagag
tggccgccgccggcctgcagcgcctcggcgaaggtgacattgagcctccgggcacgccgc
ttggggtccgaggacacaatatacttccgtatgggacacacgattatacttttcaatcag
gcatttctcgctatccagtcagttcgctgctattcccatgggtcacaggagacagatgag
gagtttgatgctcgctgggtaacatacttcaacaagccagatatagatgcctgggaattg
cgtaaagggataaacacacttgttacctatgatatggttccagagcccaaaatcattgat
gctgctttgcgggcatgcagacggttaaatgattttgctagtacagttcgtatcctagag
gttgttaaggacaaagcaggacctcataaggaaatctacccctatgtcatccaggaactt
agaccaactttaaatgaactgggaatctccactccggaggaactgggccttgacaaagtg
taa

>gi568815583r:74855987_75056583|GENSCAN_predicted_peptide_5|287_aa
MGRERNRGTETFHSLTKGTAGEASCQVMIRPVEKQRPLTNRYVNPPAGVCAAPAPLPLLA
LARRDRRPCSPGAEAAPWQSRRSRRRRRMENFRKVRSEEAPAGCGAEGGGPGSGPFADLA
PGAVHMRVKEGSKIRNLMAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLH
QVTRLRYRSVREVWQSLPPGPTQGQTPGEPAASLSVLKNVPGLAILLSKDALDPRQPGYQ
PPNPHPGPSSPPAAPASKRSLGEPAAGEGSAKRSQPEPGVADEDQTA

>gi568815583r:74855987_75056583|GENSCAN_predicted_CDS_5|864_bp
atgggaagggaaagaaatcgaggcacagagacgttccatagcttgaccaagggcacagct
ggggaagccagctgccaggtcatgatcagaccagtggagaaacagaggcctctgaccaac
agatatgtgaacccgcccgccggcgtctgcgctgctccggcgcccttacccctgctggcc
cttgcaaggcgcgaccggcggccatgcagccccggggctgaggccgccccatggcaaagc
cggcggtcccggcgacgacggcgcatggagaacttccgtaaggtgcgctccgaagaggcg
ccagcggggtgcggggccgagggaggcggcccgggctccggccccttcgcagacctggcg
ccgggcgcggtgcacatgcgggtcaaggaaggcagcaagatccggaacctgatggccttc
gccaccgccagcatggcgcagccagccacgcgcgccatcgtcttcagcggctgcggccgg
gccaccaccaaaaccgtcacgtgcgccgagatcctcaagcgccgcctggcgggcctgcac
caggtcacgcggctgcgctaccggagcgtacgcgaggtgtggcagagcctcccgcctggg
cccacgcagggtcagacgcctggcgagccggccgctagtctcagcgtacttaagaacgtg
cccggcctcgccatcctactttccaaggacgcgctggatccgcgacagcccggctaccag
cccccgaatccccatcctggtccctcgtccccgccagccgcgccagcgtccaagaggagc
ctaggggaacccgcagctggagaaggctccgcgaagcgatcgcaacccgagccaggggtt
gcggacgaggatcagacggcctga

>gi568815583r:74855987_75056583|GENSCAN_predicted_peptide_6|368_aa
MALSACRCQPMHFPVLVDWFGDPLGVKISSDSFMEWINEDNIKKCLCGIFINPPRSGSRP
APRRIARVQRSSAQRCGLSAAERPRQDQGLSTSLHWCPCVSLFTGFVYQFRTKRCGQATG
PAGNIMAEKVNNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLWMLNSVTLAVNL
VGCLAWLIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQ
LVISIIQAVGIPGWGVCPTLASSCSGWIATISFFGTNIGSAVVMLIPTVMFTVMAVFSFI
ALSMVHKFYRGSGGSFSKAQEEWTTGAWKNPHVQQAAQNAAMGAAQGAMNQPQTQYSATP
NYTYSNEM

>gi568815583r:74855987_75056583|GENSCAN_predicted_CDS_6|1107_bp
atggctctttcagcctgcaggtgtcagcccatgcatttccctgtgcttgtggactggttt
ggtgatccactgggtgtcaagatttcttctgatagctttatggaatggatcaatgaggat
aacatcaaaaaatgtttatgtggaatcttcatcaacccaccccggagcggctcgcggccg
gctccgcgccgcatcgctcgggtgcagcgcagctcagcgcagcgctgcggcctttcggca
gccgaacggccgcggcaggatcaaggcttgtccacctccttgcactggtgcccctgtgtc
tccctcttcacgggctttgtctatcagttcaggacaaagaggtgtgggcaggccactggg
ccagctggtaacatcatggcagagaaagtgaacaacttcccaccattgcccaaattcatc
ccgctgaagccatgtttctaccaagacttcgaggcagatattcctccccagcatgtcagc
atgaccaagcgcctctactacctctggatgttgaacagcgtcacgctggccgtgaacctg
gtgggctgtctcgcgtggctgatcggaggcgggggagccaccaactttggcctcgccttt
ctctggctcatcctcttcacaccctgctcctacgtctgctggtttcggcccatttacaag
gccttcaagactgacagctccttcagtttcatggcattcttctttaccttcatggctcag
ttggtcatcagcatcatccaggccgtgggcatcccaggctggggcgtctgccccacactg
gcctcttcctgcagcggctggattgctaccatctccttcttcggaacgaacattggctcg
gcggtggtgatgctaattcccactgtcatgttcacagtgatggccgtcttttccttcatc
gccctcagcatggttcataaattttaccggggaagtggggggagtttcagcaaagctcag
gaggagtggaccacaggggcctggaagaatccacatgtgcagcaggcagcccagaacgca
gccatgggggcagcccagggtgccatgaatcagcctcagactcagtattccgccaccccc
aattacacgtactccaatgagatgtga

>gi568815583r:74855987_75056583|GENSCAN_predicted_peptide_7|204_aa
MKEECGPEPPRLEVAVVTTERAKHFYSPQDIPVTLYSDADEWEIWKSRSDPVLHIDLRRW
ADLLLVAPLDANTLGKVASGICDNLLVSDVLVPSSVPGPHTQFAELQTSLYKETCCCGAP
TCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGA
MAEVGTIVDKVKEVLFQHSGFQQS

>gi568815583r:74855987_75056583|GENSCAN_predicted_CDS_7|615_bp
atgaaggaagaatgtggtccagagccccccaggctggaagtagcagtggtcacaactgag
agagccaaacatttctacagcccccaggacattcctgtcaccctctacagcgacgctgat
gaatgggagatatggaagagccgctctgacccagttctgcacattgacctgcggaggtgg
gcagacctcctgctggtggctcctcttgatgccaacactctggggaaggtggccagtggc
atctgtgacaacttgcttgtgagtgatgtcctggtgccctcgtccgtccctgggcctcac
acccagtttgctgagctgcagacatccttgtacaaggagacctgctgctgtggggccccg
acctgcgtcatgcgggcctgggaccgcagcaagcccctgctcttctgcccggccatgaac
accgccatgtgggagcacccgatcacagcgcagcaggtagaccagctcaaggcctttggc
tatgtcgagatcccctgtgtggccaagaagctggtgtgcggagatgaaggtctcggggcc
atggctgaagtggggaccatcgtggacaaagtgaaagaagtcctcttccagcacagtggc
ttccagcagagttga