GENSCAN 1.0	Date run: 14-Jul-118	Time: 21:20:05

Sequence gi568815584r:69676285_69897155 : 220871 bp : 44.13% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   8653   8692   40                              -2.56
 1.01 Init +  14189  14249   61  1  1   51   80    45 0.197   1.41
 1.02 Intr +  22669  22792  124  2  1   61   34    87 0.311   0.24
 1.03 Intr +  25115  25191   77  2  2   82   83    54 0.757   3.46
 1.04 Intr +  27111  27308  198  1  0  115   56   218 0.982  20.62
 1.05 Intr +  28320  28458  139  1  1   76  109   105 0.956  10.92
 1.06 Intr +  32393  32820  428  2  2   96  101   243 0.617  19.83
 1.07 Intr +  33340  33364   25  2  1   67  115    -6 0.035  -2.92
 1.08 Intr +  42922  43092  171  1  0   61  100    66 0.019   4.16
 1.09 Intr +  48974  49087  114  2  0   29   80    95 0.013   2.36
 1.10 Term +  82683  82827  145  0  1   47   54   127 0.185   2.58
 1.11 PlyA +  84687  84692    6                              -0.45

 2.00 Prom +  85488  85527   40                              -3.96
 2.01 Init +  91873  91998  126  0  0   78  103   109 0.767  11.56
 2.02 Intr +  92320  92390   71  0  2   44  100    70 0.756   1.78
 2.03 Intr +  92514  92612   99  0  0   74   92    34 0.560   1.63
 2.04 Intr +  94711  94821  111  1  0   83   70    41 0.520   1.29
 2.05 Term +  94913  95177  265  2  1   59   37   125 0.444  -0.52
 2.06 PlyA +  95702  95707    6                               1.05

 3.06 PlyA -  95969  95964    6                               1.05
 3.05 Term - 100104  99998  107  1  2  103   41    85 0.990   3.87
 3.04 Intr - 102245 102049  197  1  2   48   96   104 0.989   6.26
 3.03 Intr - 103076 102898  179  2  2  112   90   129 0.998  14.22
 3.02 Intr - 110023 109813  211  0  1  100  116   277 0.686  30.62
 3.01 Init - 120871 120516  356  1  2   74   96   517 0.991  47.71
 3.00 Prom - 123823 123784   40                              -5.06

 4.06 PlyA - 124358 124353    6                               1.05
 4.05 Term - 126959 126769  191  0  2   56   42   148 0.952   4.61
 4.04 Intr - 132631 132533   99  2  0   83   53    81 0.331   4.18
 4.03 Intr - 146714 146628   87  0  0   75   94    21 0.349   1.34
 4.02 Intr - 147630 147542   89  2  2   44  108    41 0.495   1.31
 4.01 Init - 148062 147824  239  0  2   81   36   199 0.712  11.49
 4.00 Prom - 152938 152899   40                              -5.76

 5.00 Prom + 154304 154343   40                              -4.56
 5.01 Init + 157938 157944    7  2  1   40   84     0 0.172  -4.25
 5.02 Intr + 166435 166581  147  2  0   43   58   213 0.559  14.01
 5.03 Intr + 169471 169616  146  2  2   89   45    41 0.090  -0.10
 5.04 Term + 183121 183330  210  0  0  108   42    67 0.013   1.39
 5.05 PlyA + 184676 184681    6                               1.05

 6.00 Prom + 195728 195767   40                              -4.76
 6.01 Init + 203395 203493   99  0  0  101  110   201 0.913  21.86
 6.02 Term + 205491 205607  117  2  0   63   53    31 0.531  -4.36
 6.03 PlyA + 206583 206588    6                               1.05

 7.02 PlyA - 206719 206714    6                               1.05
 7.01 Sngl - 209856 209056  801  0  0   94   36   910 0.991  82.24

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:69676285_69897155|GENSCAN_predicted_peptide_1|493_aa
MWEGFKEKACKRSRGIFQEHELSTELPSANLELSENDPGAQIKTVSCLDCGFWKPLNNFF
AMSCHGVLSINYATEMNQLDTVQGEPGMCPLPPEPENGGYICHPRPCRDPLTAGSVIEYL
CAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPTLSIVASTASSVALIL
LLVVLFVLLQPKLKSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEEAVYGSSGHCVPPAD
PRVQIVLSEGSGPSGRSVPREQQLPDQGACSSAGGEDEAPGQSGLCEAWGSRASETVMVH
QATTSSWVAGSGNRQLAHKETADSENSDIQSLLSLTSEEYTDAEETKAHRRIPLSNVQNQ
DTKPFSKMQSQMLSSLSSQDGFWVPGKIRQGQETQAAPVSSLGLASERLPGLWKIVKAAL
ANPYIQSQKWELDQGFFPQQEPIQASDRLSDEQITPQKASDIRKYLLEFWKGSKKLQQKL
LEGTHSPPLAYVV

>gi568815584r:69676285_69897155|GENSCAN_predicted_CDS_1|1482_bp
atgtgggaaggattcaaagagaaagcttgtaagaggagcagagggatcttccaggagcac
gagttaagtacagagcttccttctgcgaacctggaattgtcagagaatgatcctggtgca
cagatcaagacagtttcttgcctagactgtggcttctggaagccactgaacaatttcttt
gccatgagctgccatggggtgctcagcattaattatgccacggaaatgaaccaattagac
acagtccaaggagagccagggatgtgccccctaccaccggagccagagaatggtggctac
atctgccacccccggccctgcagagaccccctgacagcaggcagtgtcatcgaatacctg
tgtgctgaaggctacatgttgaagggcgattacaaatacctgacgtgtaagaatggcgag
tggaaaccagccatggagattagctgccgtctcaacgaggataaagacacccacacatca
cttggggtccccacgctgtctatagtggcttctactgccagctccgtggcgctcattctc
ctcctcgtggtgctgtttgtgctgctgcagccaaagctgaagtctttccatcatagcagg
cgtgaccagggggtatctggggaccaggtctccatcatggtggatggagtccaggttgca
ctaccatcatacgaggaggctgtatatggcagttctggtcactgtgtgccacctgctgac
cccagagtacagattgtgctgtcagaagggtctgggcccagtgggaggagcgtgccaagg
gagcaacagctgccggaccaaggggcctgctcctctgcaggtggagaagatgaggcccca
ggccagtctggactatgtgaagcctggggctctcgggcctcagagactgtgatggtgcat
caggcaaccacctcttcctgggtggccggctcagggaaccgccaactggcacacaaagaa
actgcagattcagagaacagtgacatacaaagccttttatccctcacgtcagaggagtac
acagatgctgaggaaactaaggctcacagaagaatccctctcagcaatgtccaaaaccag
gacaccaagccatttagcaaaatgcagtcccagatgctcagcagtctcagcagtcaggat
gggttctgggtccctggaaagatcaggcaaggccaggagacccaggcagcccctgtctcc
tccctgggccttgcttctgaaaggctgcccggtctatggaagattgtaaaggcagcccta
gcaaacccatacattcagtctcagaagtgggagctggaccagggcttcttcccacaacaa
gaacccatccaggccagtgatagactcagcgatgagcagataaccccacagaaagccagt
gacatcaggaagtatttgctggagttctggaaaggatctaagaagcttcaacagaagctc
ctggaagggacgcactctcctcctctggcctacgtggtgtga

>gi568815584r:69676285_69897155|GENSCAN_predicted_peptide_2|223_aa
MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRVVEFASYGDLKNAIEKLSGKE
INGRKIKLIEGSKRHRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSKSRS
VSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN

>gi568815584r:69676285_69897155|GENSCAN_predicted_CDS_2|672_bp
atgagtggctgtcgggtattcatcgggagactaaatccagcggccagggagaaggacgtg
gaaagattcttcaagggatatggacggataagagatattgatctgaaaagaggctttggt
tttgtggaatttgaggatccaagggatgcagatgatgctgtgtatgagcttgatggaaaa
gaactctgtagtgaaagggttactattgaacatgctagggctcggtcacgaggtggaaga
ggtagaggacgatactctgaccgttttagtagtcgcagacctcgaaatgatagacgggtg
gttgagtttgcctcttatggtgacttaaagaatgctattgaaaaactttctggaaaggaa
ataaatgggagaaaaataaaattaattgaaggcagcaaaaggcacaggtcaagaagcagg
tctcgatcccggaccagaagttcctctaggtctcgtagccgatcccgttcccgtagtcgc
aaatcttacagccggtcaagaagcaggagcaggagccggagccggagcaagtcccgttct
gttagtaggtctcccgtgcctgagaagagccagaaacgtggttcttcaagtagatctaag
tctccagcatctgtggatcgccagaggtcccggtcccgatcaaggtccagatcagttgac
agtggcaattaa

>gi568815584r:69676285_69897155|GENSCAN_predicted_peptide_3|349_aa
MEAHNASAPFNFTLPPNFGKRPTDLALSVILVFMLFFIMLSLGCTMEFSKIKAHLWKPKG
LAIALVAQYGIMPLTAFVLGKVFRLKNIEALAILVCGCSPGGNLSNVFSLAMKGDMNLSI
VMTTCSTFCALGMMPLLLYIYSRGIYDGDLKDKVPYKGIVISLVLVLIPCTIGIVLKSKR
PQYMRYVIKGGMIIILLCSVAVTVLSAINVGKSIMFAMTPLLIATSSLMPFIGFLLGYVL
SALFCLNGRCRRTVSMETGCQNVQLCSTILNVAFPPEVIGPLFFFPLLYMIFQLGEGLLL
IAIFWCYEKFKTPKDKTKMIYTAATTEETIPGALGNGTYKGEDCSPCTA

>gi568815584r:69676285_69897155|GENSCAN_predicted_CDS_3|1050_bp
atggaggcccacaacgcgtctgccccattcaacttcaccctgccacccaactttggcaag
cgccccacagacctggcactgagcgtcatcctggtgttcatgttgttcttcatcatgctc
tcgctgggctgcaccatggagttcagcaagatcaaggctcacttatggaagcctaaaggg
ctggccatcgccctggtggcacagtatggcatcatgcccctcacggcctttgtgctgggc
aaggtcttccggctgaagaacattgaggcactggccatcttggtctgtggctgctcacct
ggagggaacctgtccaatgtcttcagtctggccatgaagggggacatgaacctcagcatt
gtgatgaccacctgctccaccttctgtgcccttggcatgatgcctctcctcctgtacatc
tactccagggggatctatgatggggacctgaaggacaaggtgccctataaaggcatcgtg
atatcactggtcctggttctcattccttgcaccatagggatcgtcctcaaatccaaacgg
ccacaatacatgcgctatgtcatcaagggagggatgatcatcattctcttgtgcagtgtg
gccgtcacagttctctctgccatcaatgtggggaagagcatcatgtttgccatgacacca
ctcttgattgccacctcctccctgatgccttttattggctttctgctgggttatgttctc
tctgctctcttctgcctcaatggacggtgcagacgcactgtcagcatggagactggatgc
caaaatgtccaactctgttccaccatcctcaatgtggcctttccacctgaagtcattgga
ccacttttcttctttcccctcctctacatgattttccagcttggagaagggcttctcctc
attgccatattttggtgctatgagaaattcaagactcccaaggataaaacaaaaatgatc
tacacagctgccacaactgaagaaacaattccaggagctctgggaaatggcacctacaaa
ggggaggactgctccccttgcacagcctag

>gi568815584r:69676285_69897155|GENSCAN_predicted_peptide_4|234_aa
MPSGTIWILEARHSHSGVLLWPIYRVTRKAASFEREPEQDKALQQAQSAVQAALPLGLYD
PADPMVLEVSVADNDAGPHRHKVGRAQQHPIIQWKSYILDQAQTGPEGTKRAEICPHQVA
GLIDLDYQDEISLLIHNRAMQHQIQKFTNVLDGTERVQKYSLSDIAASAIGSHKMPCSFD
LSLVEQLLWGHQLPDKKSDYSEITMQMTYPQQPYEDPKQKPSAEPVISQNCERE

>gi568815584r:69676285_69897155|GENSCAN_predicted_CDS_4|705_bp
atgcctagtgggactatttggattttggaagcaagacattctcattcgggtgtgttactc
tggcccatttatcgagtgacccgaaaggctgccagttttgagcgagaaccagaacaggac
aaggcgctgcaacaggcccagtctgctgtgcaagctgctctgccacttgggctatatgac
ccagcagatccaatggtgcttgaggtgtcagtggcagataatgatgctggcccccataga
cataaagtgggtcgtgcacagcagcatcccatcatccaatggaagtcgtatatacttgat
caggctcaaacaggtcctgaaggcacaaaaagggcagaaatttgtcctcaccaggtggct
gggctgattgacctggactatcaagatgaaattagtctactaatccataacagagctatg
cagcaccaaattcagaaatttacaaatgtgcttgatggcacagagagagttcagaagtac
tcactgagtgatattgctgcttcagccataggaagtcataagatgccttgcagctttgac
ttaagcctcgtggagcaattgctctggggccatcagctaccagataagaagtctgactac
tctgagatcacgatgcagatgacttatcctcagcaaccatatgaggaccccaagcaaaag
ccatcagctgaacctgtcatatcccagaactgtgaaagagaataa

>gi568815584r:69676285_69897155|GENSCAN_predicted_peptide_5|169_aa
MQAAKRPSDEWEGKAEGGEEKEKEEEEEEEEEEEEVEEVAVAVQARQSGMECDSPQFFGA
SIAPSQSGPNLELKQVAGGSQSGLLIPLAPVIEYVAQPEAVRSERGCLEGPLLWPQKPHS
RSPQAPLSMRTVDPKAKEKSKKLGPDAMQLTPKFASKLGVREKLRIPKH

>gi568815584r:69676285_69897155|GENSCAN_predicted_CDS_5|510_bp
atgcaagctgcaaagaggcccagtgatgaatgggaggggaaagcggaaggtggggaggag
aaggagaaggaggaggaggaggaggaggaggaggaggaggaggaggtggaggaggtggca
gtggcggtacaagcaaggcagagtgggatggagtgtgacagcccccaattttttggtgca
tccattgctccctcacaatcaggccccaacttagagctgaagcaggtggcaggtggaagc
cagtcagggcttctcattcctctggctccagtaattgagtatgtggctcagccagaagca
gtgaggtcagaaagagggtgccttgaaggcccccttctgtggcctcagaaaccacactcc
cgcagtccccaggctcccctcagcatgaggacagtggatccaaaggcaaaggagaagagt
aagaagctggggcccgatgccatgcaattaacccccaagtttgcttcaaaacttggtgta
agagaaaaactgaggatccccaagcactaa

>gi568815584r:69676285_69897155|GENSCAN_predicted_peptide_6|71_aa
MLPARCARLLTPHLLLVLVQLSPARGHRTTGPRITIRATTYEHLGWALYMISYSNENKKL
GLLKAILQMTK

>gi568815584r:69676285_69897155|GENSCAN_predicted_CDS_6|216_bp
atgctgcccgcgcgctgcgcccgcctgctcacgccccacttgctgctggtgttggtgcag
ctgtcccctgctcgcggccaccgcaccacaggccccaggataacaataagagctaccact
tatgaacatctgggctgggcactttacatgatctcttactcgaacgagaacaagaagttg
ggtcttttaaaagccattttacagatgacaaagtga

>gi568815584r:69676285_69897155|GENSCAN_predicted_peptide_7|266_aa
MPKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRY
IRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEK
KAAGKGDVPKKRPPVLRAGVNTVTTLVENKKAQLVVISHDMDPIELVVFLPALCRKMGVP
YCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGN
VLGPKSVARIAKRKKAKAKELATKLG

>gi568815584r:69676285_69897155|GENSCAN_predicted_CDS_7|801_bp
atgccgaaaggaaagaaggccaagggaaagaaggtggctccggccccagctgtcgtgaag
aagcaggaggctaagaaagtggtgaatcccctgtttgagaaaaggcctaagaattttggc
attggacaggacatccagcccaaaagagacctcacccgctttgtgaaatggccccgctat
atcaggttgcagcggcagagagccatcctctataagcggctgaaagtgcctcctgcgatt
aaccagttcacccaggccctggaccgccaaacagctactcagctgcttaagctggcccac
aagtacaggccagagacaaagcaagagaagaagcagagactgttggcccgggccgagaag
aaagctgctggcaaaggggacgtcccgaagaagagaccacctgtccttcgagcaggagtt
aacactgtcaccaccttggtggagaacaagaaagctcagctggtggtgatttcacacgac
atggatcccatcgagctggttgtcttcttgcctgccctatgtcgtaaaatgggggtccct
tactgcattatcaaggggaaggcaagactgggacgtctagtccacaggaagacctgcacc
actgtcgccttcacacaggtgaactcagaagacaaaggcgctttggctaagctggtggaa
gctatcaggaccaattacaatgacagatacgatgagatccgccgtcactggggtggcaat
gtcctgggtcctaagtctgtggctcgtatcgccaagcgcaaaaaggcaaaggctaaagaa
cttgccactaaactgggttaa