GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:36:40

Sequence gi568815584f:69299370_69558590 : 259221 bp : 45.39% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   8717   8863  147  0  0  118   48   101 0.404   9.31
 1.02 Intr +  13793  13848   56  0  2   37   91    43 0.054  -1.80
 1.03 Intr +  21342  21499  158  2  2   97   96   284 0.992  28.91
 1.04 Intr +  25323  25421   99  0  0  113  107   199 0.999  23.53
 1.05 Intr +  25968  26035   68  0  2   58   78    60 0.970   0.55
 1.06 Intr +  26593  26658   66  2  0   89  113    51 0.964   6.58
 1.07 Intr +  29081  29202  122  0  2   89   83   161 0.899  15.91
 1.08 Term +  29618  29671   54  1  0   60   42    53 0.761  -4.54
 1.09 PlyA +  30260  30265    6                               1.05

 2.00 Prom +  31157  31196   40                              -3.06
 2.01 Init +  31385  31513  129  1  0   60   49   141 0.820   7.55
 2.02 Intr +  32095  32182   88  0  1  103  105    79 0.998  10.64
 2.03 Intr +  33716  33800   85  0  1  108   77    67 0.954   6.48
 2.04 Intr +  34128  34231  104  0  2  109   97   106 0.998  13.42
 2.05 Intr +  39282  39408  127  1  1   90   96   110 0.999  11.74
 2.06 Intr +  40158  40250   93  0  0  139   80   149 0.999  18.28
 2.07 Intr +  40297  40321   25  1  1   67   68    19 0.871  -4.17
 2.08 Intr +  41774  41858   85  1  1   55  100   105 0.926   7.79
 2.09 Intr +  42281  42395  115  0  1   61   94   188 0.926  16.21
 2.10 Intr +  47671  47812  142  1  1   88  110   105 0.999  13.06
 2.11 Intr +  48508  48633  126  0  0  121  109    95 0.999  15.78
 2.12 Term +  52662  52799  138  2  0  117   49    41 0.316   1.06
 2.13 PlyA +  55075  55080    6                               1.05

 3.04 PlyA -  56226  56221    6                              -0.45
 3.03 Term -  59302  59111  192  1  0   31   34   145 0.075   0.82
 3.02 Intr -  63906  63748  159  0  0   90   56    93 0.155   6.48
 3.01 Init -  69618  69604   15  0  0   73  109     7 0.122   0.49
 3.00 Prom -  78854  78815   40                              -0.96

 4.05 PlyA -  79225  79220    6                               1.05
 4.04 Term -  81271  81169  103  0  1  112   32   142 0.999   8.75
 4.03 Intr -  87714  87594  121  1  1   94   78    87 0.913   7.85
 4.02 Intr -  95543  95456   88  2  1   74  113    61 0.614   6.74
 4.01 Init -  95897  95895    3  2  0   63   46     0 0.291  -6.70
 4.00 Prom -  97721  97682   40                              -1.16

 5.00 Prom +  97840  97879   40                              -7.36
 5.01 Init +  98770  99081  312  0  0   57  116   357 0.797  30.73
 5.02 Intr + 124725 124833  109  2  1  106   76   145 0.694  14.96
 5.03 Intr + 142700 142897  198  0  0   74  113   172 0.983  17.62
 5.04 Intr + 153872 153940   69  0  0   94   91    34 0.900   3.45
 5.05 Intr + 155413 155528  116  2  2   60  121    49 0.916   5.57
 5.06 Intr + 156363 156497  135  2  0   63  121    57 0.984   7.26
 5.07 Term + 158994 159224  231  2  0   99   36    77 0.523   0.07
 5.08 PlyA + 160918 160923    6                               1.05

 6.00 Prom + 180505 180544   40                              -5.26
 6.01 Init + 185597 185745  149  1  2   61  101   275 0.995  25.66
 6.02 Intr + 200746 200839   94  1  1   77  100    57 0.980   5.77
 6.03 Intr + 201208 201297   90  0  0   93   84   137 0.970  13.99
 6.04 Intr + 201502 201578   77  0  2   90   78   100 0.994   7.51
 6.05 Intr + 202365 202456   92  0  2  135   24    80 0.452   5.94
 6.06 Intr + 203458 203510   53  2  2   68   92    35 0.482   0.53
 6.07 Intr + 222914 223008   95  1  2  131   26   173 0.871  14.16
 6.08 Intr + 224860 224953   94  1  1  102   78    82 0.905   8.57
 6.09 Intr + 226575 226753  179  2  2   81   77   271 0.999  24.02
 6.10 Intr + 227328 227460  133  0  1   80   86   241 0.936  23.75
 6.11 Intr + 227819 227963  145  1  1  114   80   169 0.999  18.56
 6.12 Intr + 228414 228563  150  1  0   94   79   298 0.990  29.63
 6.13 Intr + 228881 229046  166  0  1   73   -2   207 0.032   9.22
 6.14 Intr + 238362 238407   46  0  1  106   81    72 0.389   6.71
 6.15 Intr + 248442 248580  139  2  1   40   93   104 0.957   6.14
 6.16 Intr + 248613 248722  110  1  2   56  105   135 0.629  12.00
 6.17 Term + 253170 253226   57  2  0  102   43    54 0.526  -0.01
 6.18 PlyA + 254493 254498    6                               1.05

 7.02 PlyA - 254610 254605    6                              -0.45
 7.01 Term - 255466 255272  195  1  0   96   44   108 0.750   4.61

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  54674  54477  198  2  0   79   53   211 0.840   9.88
S.002 Init - 122420 122321  100  2  1   75   65    34 0.852   0.26
S.003 Init + 124345 124347    3  0  0  108   22     0 0.882  -4.60
S.004 Term + 228881 229050  170  0  2   73   45   212 0.885  13.44


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:69299370_69558590|GENSCAN_predicted_peptide_1|256_aa
XLSYSGRYLGPQMLQLRKDLLFINVFIPEFHSEDDDDNDDSNELNPFILDAQSSPHTLGY
SSCGWKDQVTGTPSKGFDEKAYLSAKQLKAGEDPYRQHAFNQLESDKLSPDRPIRDTRHY
SCPSVSYSSDLPATSVIITFHNEARSTLLRTVKSVLNRTPANLIQEIILVDDFSSDPEDC
LLLTRIPKVKCLRNDRREGLIRSRVRGADVAAATVLTFLDSHCEVNTEWLPPMLQRVKEG
GFGQMAEKDEVITTRP

>gi568815584f:69299370_69558590|GENSCAN_predicted_CDS_1|771_bp
ngactaagctactccggacggtacctcggccctcagatgttacagctgaggaaggactta
cttttcatcaatgtatttatccctgagtttcactctgaggatgatgatgataatgatgac
agtaatgagctcaatccttttatcttagatgcccagtcttccccccatactctgggctac
agcagctgtggctggaaggatcaggtgacaggaactccctcgaaaggctttgatgagaag
gcctacctgtcggccaagcagctgaaggctggagaggacccctacagacagcacgccttc
aaccagctggagagtgacaagctgagcccagaccggcccatccgggacacccgccattac
agctgcccatctgtgtcctactcctcggacctgccagccaccagcgtcatcatcaccttc
cacaatgaggcccgttccaccctgctgcgcacagtgaagagtgtcctgaaccgaactcct
gccaacttgatccaggagatcattttagtggatgacttcagctcagatccggaagactgt
ctactcctgaccaggatccccaaggtcaagtgcctgcgcaatgatcggcgggaagggctg
atccggtcccgagtgcgtggggcggacgtggctgcagctaccgttctcacctttctggat
agccactgcgaagtgaacaccgagtggctgccgcccatgctgcagcgggtgaaggaggga
ggatttggacagatggcagaaaaggatgaggtgataacaacccgaccataa

>gi568815584f:69299370_69558590|GENSCAN_predicted_peptide_2|418_aa
MRRLMKGDEVLHVVYDIIYHPKKEASKINIIHQGFGFGFVFWEDHTRVVSPIIDVISLDN
FAYLAASADLRGGFDWSLHFKWEQIPLEQKMTRTDPTRPIRTPVIAGGIFVIDKSWFNHL
GKYDAQMDIWGGENFELSFRVWMCGGSLEIVPCSRVGHVFRKRHPYNFPEGNALTYIRNT
KRTAEVWMDEYKQYYYEARPSAIGKAFGSTTPAKYEVLNVEETEAQIAGDEGRQPVAIVV
GVPEEGQSPSPASSYSVATRIEQRKKMNCKSFRWYLENVYPELTVPVKEALPGIIKQGVN
CLESQGQNTAGDFLLGMGICRGSAKNPQPAQAWLFSDHLIQQQGKCLAATSTLMSSPGSP
VILQMCNPREGKQKWRRKGSFIQHSVSGLCLETKPAQLVTSKCQADAQAQQWQLLPHT

>gi568815584f:69299370_69558590|GENSCAN_predicted_CDS_2|1257_bp
atgagaaggctcatgaagggtgatgaagttttacatgtggtatatgacataatctaccac
cccaaaaaagaggccagcaaaatcaacattattcatcaaggttttggatttggatttgtg
ttctgggaggaccacacccgcgtggtgagtcccatcattgatgtcatcagtctggataat
tttgcctaccttgcagcatctgctgaccttcgtggagggttcgactggagcctgcatttc
aagtgggagcagatccctcttgagcagaagatgacccggacagaccccaccaggcccata
aggacgcctgtcatagctggaggaatcttcgtgatcgacaagtcctggtttaaccacttg
ggaaagtatgatgcccagatggacatctgggggggagagaattttgagctctccttcagg
gtgtggatgtgtggtggcagtctggagatcgtcccctgcagccgggtgggccatgtcttc
aggaaacggcacccctacaacttccctgagggtaatgccctcacctacatcaggaatact
aagcgcactgcagaagtgtggatggatgaatacaagcaatactactatgaggcccggccc
tcggccatcgggaaggccttcggcagcacaaccccagcaaaatacgaagtgttgaatgta
gaggaaactgaggctcagatagctggtgacgagggccgtcaaccagtggccattgtggtg
ggtgtacctgaggaaggccaaagcccaagccctgcctcctcctacagtgtggctacgcgg
atagagcagaggaagaagatgaactgcaagtccttccgctggtacctggagaacgtctac
ccagagctcacggtccccgtgaaggaagcactccccggcatcattaagcagggggtgaac
tgcttagaatctcagggccagaacacagctggtgacttcctgcttggaatggggatctgc
agagggtctgccaagaacccgcagcccgcccaggcatggctgttcagtgaccacctcatc
cagcagcaggggaagtgcctggctgccacctccaccttaatgtcctcccctggatcccca
gtcatactgcagatgtgcaaccctagagaaggcaagcagaaatggaggagaaaaggatct
ttcatccagcattcagtcagtggcctctgcctggagacaaagcctgcccagctggtgacc
agcaagtgtcaggctgacgcccaggcccagcagtggcagctgttgccacacacatga

>gi568815584f:69299370_69558590|GENSCAN_predicted_peptide_3|121_aa
MARAQRDCHPPSGLVMAARPCVLYGPHKQRALAEDCLRSLHLPCSREPKSCQTGMQTTEG
EPPGALSTAKASSPSQHPSEGEVSPKPPPDGCRTKATPHTQEKAPSATLLLHLLPPQLTV
T

>gi568815584f:69299370_69558590|GENSCAN_predicted_CDS_3|366_bp
atggccagagcacagcgtgactgccatcctccctcaggcctggtgatggcagcaaggcca
tgcgtgctctacggcccccacaagcagagggcactggccgaggactgtctccgcagcctg
catcttccctgctccagggaacctaagtcatgtcagacagggatgcagacaacggagggg
gaaccccccggagctctaagcactgccaaagccagctcaccttcccagcatccttcagaa
ggagaagtcagtcccaagcccccacctgatggctgcagaaccaaggccacaccgcacacc
caagagaaagctcccagtgccactctgctgctccacctgctgcccccacaacttactgtg
acctga

>gi568815584f:69299370_69558590|GENSCAN_predicted_peptide_4|104_aa
MSHTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDF
IDDLADLSCLVYRADTQTYQPYNKDWIKEKIYVLLRRQAQQAGK

>gi568815584f:69299370_69558590|GENSCAN_predicted_CDS_4|315_bp
atgtctcacaccattttgctggtacagcctaccaagaggccagaaggcagaacttatgct
gactacgaatctgtgaatgaatgcatggaaggtgtttgtaaaatgtatgaagaacatctg
aaaagaatgaatcccaacagtccctctatcacatatgacatcagtcagttgtttgatttc
atcgatgatctggcagacctcagctgcctggtttaccgagctgatacccagacataccag
ccttataacaaagactggattaaagagaagatctacgtgctccttcgtcggcaggcccaa
caggctgggaaataa

>gi568815584f:69299370_69558590|GENSCAN_predicted_peptide_5|389_aa
MGLVGRGKRMGLGSLWRPGTRTRVAAEAFLTIAPNSLRYSSCRHRRRYTSLTTTPLTANP
RERSRRKSSKVQRKRAFWIIEAQSLPAARAATDSVSAIFDKGKKERLKLVTVLGAGLLCG
TALAVIVPEGVHALYEDILEGKHHQASETHNVIASDKAAEKSVVHEHEHSHDHTQLHAYI
GVSLVLGFVFMLLVDQIGNSHVHSTDDPEAARSSNSKITTTLGLVVHAAVFYVSLFPNIA
DGVALGAAASTSQTSVQLIVFVAIMLHKAPAAFGLVSFLMHAGLERNRIRKHLLVFALAA
PVMSMVTYLGLSKSSKEALSEVNATGVAMLFSAGTFLYVATVHVLPEVGGIGHSHKPDAT
GGRGLSRLEVAALVLGCLIPLILSVGHQH

>gi568815584f:69299370_69558590|GENSCAN_predicted_CDS_5|1170_bp
atggggctcgtggggaggggaaaacgtatggggctggggtcgctctggaggccggggact
cggactcgggtagccgcggaggcctttctcaccatcgcgccaaactctcttcgctacagc
agctgccgacaccgccgccgttacacgagcttaactacaacgccgctaacagccaatcct
cgcgagaggagccgccggaagtcgtcgaaagtgcaacgcaaaagagccttttggatcata
gaggcacagtcacttccggcagctagagcagctactgactctgtttcagccatcttcgat
aaaggcaaaaaggaacgactgaagctggtgactgttttgggtgctggccttctctgtgga
actgctctggcagtcatcgtgcctgaaggagtacatgccctttatgaagatattcttgag
ggaaaacaccaccaagcaagtgaaacacataatgtgattgcatcagacaaagcagcagaa
aaatcagttgtccatgaacatgagcacagccacgaccacacacagctgcatgcctatatt
ggtgtttccctcgttctgggcttcgttttcatgttgctggtggaccagattggtaactcc
catgtgcattctactgacgatccagaagcagcaaggtctagcaattccaaaatcaccacc
acgctgggtctggttgtccatgctgcagtattttatgtttccttgtttccaaatatagct
gatggtgttgctttgggagcagcagcatctacttcacagaccagtgtccagttaattgtg
tttgtggcaatcatgctacataaggcaccagctgcttttggactggtttccttcttgatg
catgctggcttagagcggaatcgaatcagaaagcacttgctggtctttgcattggcagca
ccagttatgtccatggtgacatacttaggactgagtaagagcagtaaagaagccctttca
gaggtgaacgccacgggagtggccatgcttttctctgccgggacatttctttatgttgcc
acagtacatgtcctccctgaggtgggcggaatagggcacagccacaagcccgatgccacg
ggagggagaggcctcagccgcctggaagtggcagccctggttctgggttgcctcatccct
ctcatcctgtcagtaggacaccagcattaa

>gi568815584f:69299370_69558590|GENSCAN_predicted_peptide_6|622_aa
MFTSKSNSVSPSPSLEQADSDALDISTKVQLYGVLWKRPFGRPSAKWSRRFFIIKESFLL
YYSESEKKSFETNKYFNIHPKGVIPLGGCLVEPKEEPSMPYAMKISHQDFHGNILLAAES
EFEQTQWLEMLQESGKVTWKNAQLGEAMIKSLEAQGLQLAKEKQEYLDKLMEETEELCLQ
REQREELERLNQVLEAEKQQFEEVVQELRMEQEQIKRELELTARCLKGVEQEKKELRHLT
ESLQQTLEELSIEKKKTLEMLEENENHLQTLANQSEQPPPSGGLHSNLRQIEEKMQQLLE
EKLLAEKRMKENEERSRALEEEREFYSSQSQALQNSLQELTAEKQQAERELKAEVKVRMD
LERRLREAEGALRSLEQGLNSKVRNKEKEERMRADVSHLKRFFEECIRNAELEAKMPVIM
KNSVYIHKAATRRIKSCRFHRRRSSTSWNDMKPSQSFMTSQLDANNMEELKEVAKRLSRD
QRFRESIYHIMATQPGAPSALSRGGNCKMFSHHIGTDGRKKWLLLSAPEDLISSQRLAPR
APHPTLGHACGLARVGETRPPSFTSNAAQTKPCGLHGIINSENAPRDLRKETPLVAGLQV
LVCLCPTDDTILPVTPGSPMAS

>gi568815584f:69299370_69558590|GENSCAN_predicted_CDS_6|1869_bp
atgttcacgtccaagtccaactcggtgtcgccctcgccgtccctggagcaggctgactcg
gacgccctggatatcagcaccaaagtgcagctctacggcgtgctgtggaagaggcctttc
ggcaggccgtcggccaagtggtcccggcggtttttcatcatcaaagagagctttctgctt
tactactctgagagcgaaaaaaagagctttgaaaccaataaatacttcaatatacatcct
aagggcgtcatccctctggggggctgcctggtggagcccaaggaagagcctagcatgccc
tatgccatgaagatctcccaccaggacttccatgggaacatcttgcttgctgctgagtcg
gagtttgagcagacccagtggctggagatgctgcaggagtctgggaaggtgacctggaag
aatgcccagctgggagaagccatgatcaaaagcctggaggcccaggggctgcagttggct
aaggaaaagcaggagtatttagacaaactgatggaagagaccgaagaactctgccttcag
agggagcagagagaggagcttgagcgccttaaccaggtgctggaggccgagaagcagcag
ttcgaggaggtggtgcaggagctgagaatggagcaggagcagatcaagagggagctggaa
ctgactgcaagatgccttaagggtgtagaacaagagaaaaaggaactgaggcacctcacg
gagtccttgcagcagacactggaggaactctccatagagaagaagaaaaccctggaaatg
ctggaggagaacgagaaccacctgcagacactggccaatcagagtgagcagccccctccc
agtgggggcctccatagcaacctccggcagatcgaggagaagatgcagcagctcttagag
gagaagctcctggcagagaagcggatgaaggagaacgaggagcgctcacgggccctggag
gaggagcgtgagttctactccagccagtcccaggcactgcagaactcgctgcaggagctg
acggcagagaagcagcaggctgagcgggagctcaaggctgaggtgaaggtccgcatggac
ctggagaggcgtctccgggaggcagaaggggccttgcgaagcctggaacaggggctgaat
tccaaggtgcggaataaggagaaggaggagaggatgcgggctgatgtgagccatctgaaa
aggttctttgaggagtgcatccggaatgccgagctggaggccaagatgcctgtgatcatg
aagaactccgtgtacatccataaggcagccactcgccgcatcaagagctgccgcttccac
cgacgccggtccagcacctcctggaatgacatgaagccgtcccagtccttcatgacctcc
cagctggatgccaacaacatggaggagctaaaggaggtggccaagcggctcagcagggac
cagcgcttccgggaatccatctaccacatcatggccacccagcctggagccccctcggca
ctctcccggggtggaaattgcaagatgttcagccatcacatcggcactgatggcaggaag
aagtggctgctgctgtctgcgcccgaggacctcatctcctcgcagaggctggctccccgc
gccccgcatcccacgctgggacacgcgtgtggccttgccagggtgggcgagacacggccg
ccttccttcacatccaacgccgcacagacaaagccttgcgggctccacgggataatcaac
agcgagaacgcccccagggacctccggaaagagacaccattggttgcaggcctccaggtt
ctcgtctgcctgtgccccactgatgacaccattctgccagtgacgcctggatctcccatg
gcatcgtag

>gi568815584f:69299370_69558590|GENSCAN_predicted_peptide_7|64_aa
VKTKATVCRKNPKRGPGKTEGSTNKKQQHLTAAKGNALKKCLQGKAGWEPEPWLSELAAR
PWSL

>gi568815584f:69299370_69558590|GENSCAN_predicted_CDS_7|195_bp
gttaaaacgaaagccactgtctgcagaaagaaccccaaaagagggcctggaaaaacagaa
ggaagcactaataaaaagcagcagcatctaactgctgccaagggcaatgcgctcaagaaa
tgtcttcaaggaaaggctggctgggagccagagccctggctttcagagttggctgcaaga
ccttggtccttgtag