GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:11:49

Sequence gi568815584r:64848668_65072076 : 223409 bp : 44.75% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3571   3686  116  0  2   84   64    71 0.363   3.98
 1.02 Intr +   6302   6488  187  2  1   78   53    73 0.166   2.49
 1.03 Term +  11677  11787  111  0  0  102   54    31 0.159  -0.34
 1.04 PlyA +  12661  12666    6                               1.05

 2.08 PlyA -  13789  13784    6                               1.05
 2.07 Term -  21508  21497   12  1  0  115   43    -6 0.108  -4.20
 2.06 Intr -  26501  26401  101  0  2  121   37    54 0.386   3.43
 2.05 Intr -  28745  28655   91  2  1   82   90   -15 0.180  -2.33
 2.04 Intr -  30313  30260   54  1  0   74   91    30 0.191   1.08
 2.03 Intr -  30693  30612   82  2  1   76   94     8 0.095  -0.16
 2.02 Intr -  37323  37256   68  0  2   59  110    95 0.121   6.50
 2.01 Init -  58204  58121   84  1  0   82   89    46 0.865   4.92
 2.00 Prom -  60499  60460   40                              -7.06

 3.00 Prom +  64983  65022   40                              -4.06
 3.01 Init +  65748  65867  120  2  0   53   88   101 0.193   6.79
 3.02 Intr +  75324  75459  136  2  1   58   97    56 0.197   3.64
 3.03 Intr +  77343  77413   71  1  2   70   99    16 0.082  -0.20
 3.04 Term +  84420  84572  153  2  0  107   54    46 0.147   1.02
 3.05 PlyA +  86671  86676    6                               1.05

 4.03 PlyA -  87036  87031    6                               1.05
 4.02 Term -  91171  90821  351  1  0  114   37   507 0.999  42.69
 4.01 Init -  94059  94000   60  0  0   95   71    86 0.996   8.85
 4.00 Prom -  95695  95656   40                              -6.06

 5.12 PlyA -  96238  96233    6                               1.05
 5.11 Term -  99845  99687  159  2  0   78   47   211 0.935  13.94
 5.10 Intr - 100066 100001   66  1  0  105   78    93 0.767   9.10
 5.09 Intr - 101747 101658   90  2  0  102  111    87 0.796  12.59
 5.08 Intr - 102484 102407   78  1  0  107   75    78 0.956   8.15
 5.07 Intr - 102996 102936   61  2  1   98  115    60 0.999   8.44
 5.06 Intr - 103904 103844   61  0  1  138   93    92 0.999  12.49
 5.05 Intr - 106780 106694   87  2  0   88   82    28 0.512   2.14
 5.04 Intr - 108702 108678   25  0  1   77   97    12 0.398  -1.40
 5.03 Intr - 109322 109201  122  0  2   44   61    92 0.171   2.31
 5.02 Intr - 123433 123286  148  1  1   66   99   360 0.960  34.71
 5.01 Init - 124093 124043   51  1  0   69   88    70 0.634   6.31
 5.00 Prom - 129886 129847   40                              -8.76

 6.00 Prom + 130959 130998   40                              -7.06
 6.01 Init + 135100 135184   85  0  1   45   93    50 0.473   2.18
 6.02 Intr + 138348 138430   83  1  2   67   94   122 0.447  10.06
 6.03 Intr + 141353 141442   90  1  0  -23   99   104 0.135   0.59
 6.04 Intr + 155582 155646   65  1  2   80  121    77 0.420   7.72
 6.05 Intr + 160452 160470   19  0  1   75  105   -21 0.263  -5.09
 6.06 Intr + 162949 163130  182  0  2  101   29   177 0.307  11.77
 6.07 Intr + 163650 163722   73  0  1   68   82    46 0.565   1.41
 6.08 Intr + 166958 167049   92  1  2   97   70    70 0.696   4.89
 6.09 Intr + 178786 178932  147  1  0   69   92   192 0.998  17.05
 6.10 Intr + 179031 179114   84  0  0  111  105    61 0.989   9.04
 6.11 Intr + 183943 184029   87  1  0  102  100   100 0.992  11.69
 6.12 Intr + 192123 192252  130  0  1  105   83    86 0.977  10.50
 6.13 Intr + 195644 195776  133  1  1   88  105   113 0.999  13.22
 6.14 Intr + 204571 204682  112  2  1  105   89   102 0.987  11.44
 6.15 Intr + 205908 206022  115  0  1   92   99   103 0.995  12.25
 6.16 Term + 212514 212645  132  2  0  117   44   128 0.960   9.39
 6.17 PlyA + 213645 213650    6                               1.05

 7.00 Prom + 215390 215429   40                              -5.86
 7.01 Init + 216601 216665   65  0  2   97   82    -1 0.305   0.34
 7.02 Intr + 217196 217366  171  2  0   29  100    89 0.256   3.26
 7.03 Term + 221334 221442  109  0  1   70   42   123 0.290   3.88
 7.04 PlyA + 221707 221712    6                              -0.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:64848668_65072076|GENSCAN_predicted_peptide_1|137_aa
MEKWSQAQQGSKRKAYVEAWKDGRNSLEILGNCYQFREGKWRLNEIILGALALNLRQLAG
KQVPFTTTLWSNDSRDTWNHLALWKRRVPNAPVTRQRASQPNILVPQNGALRGTGGVPVK
TQLSTFPRETGPERAGL

>gi568815584r:64848668_65072076|GENSCAN_predicted_CDS_1|414_bp
atggagaagtggagccaggcacaacagggaagtaagaggaaagcatatgtggaggcatgg
aaggatggaagaaacagcctggagatcctgggaaactgctaccagttcagagaggggaag
tggcgcctgaatgagatcatccttggggcccttgcccttaatttacggcaactcgccgga
aaacaagtgcctttcacaaccactctgtggtcaaatgacagcagagacacctggaaccac
ttggctctctggaagagaagggtgcccaatgcgccagttaccaggcaaagggcctcccaa
ccaaacatcctggtgccccagaatggggcactgagaggcacaggaggagtcccagtaaaa
actcagttgtccacatttccaagagaaacaggacctgagagggcagggctctga

>gi568815584r:64848668_65072076|GENSCAN_predicted_peptide_2|163_aa
MEKEKGQAPPGSGFGKLPQGTKRKGAFLKVYFGYYVEAELKERETGERMNSLVAAHIPLL
GNLAALSSGHPAPRQEGQAGEAAAGLECCFPDNELQVRHSAGNIKYKLGRFDCLSSSFII
FIPRTSGNITKPSSSYLSKPFSGFAIMFYFHIIPVQTWLRVLG

>gi568815584r:64848668_65072076|GENSCAN_predicted_CDS_2|492_bp
atggagaaggagaaaggccaggctcctccaggaagtggatttggaaagttacctcaaggc
acaaagagaaagggagccttccttaaagtgtactttggctactatgtggaagcagaattg
aaggagagggaaactggagaacggatgaacagccttgtggccgctcatatccctcttctg
gggaacttggctgcgctctcctcgggccacccagcgcccaggcaggagggacaggctggg
gaagcagctgcggggctggagtgctgtttccctgacaacgagcttcaggttagacactca
gcagggaatataaagtacaagttgggaagatttgactgtttgtcttctagcttcataatc
ttcattcccaggacctcaggaaatattacaaagccctcttcttcctacctcagcaagccc
ttctcaggctttgccataatgttttatttccacatcatacctgtgcagacctggctgagg
gtcctggggtag

>gi568815584r:64848668_65072076|GENSCAN_predicted_peptide_3|159_aa
MRQPYLSSREVSSSRKRWRTFPVDCVAMCGDCVEKEYPNRGNTCLENGSFLLNFTGCAVC
SKRDFMLITNKSLKEEDGEEIVTYDHLCKNCHHVIARHEYTFSIMDEFQNSEPKSDQEKN
ITQIPIEKHSLKYLTSTSQNYQGHKKQGKSETWSQPRGA

>gi568815584r:64848668_65072076|GENSCAN_predicted_CDS_3|480_bp
atgcggcaaccgtatctcagttctcgcgaggtttcgtcttcccggaagcgttggaggaca
ttccctgttgactgcgtcgcgatgtgtggcgactgtgtggagaaggaatatcccaaccgg
ggtaatacctgcctggagaatggatctttcttactgaactttacaggctgtgcagtgtgc
agtaagcgggattttatgctgatcacaaacaaatccttgaaagaagaagatggagaagaa
atagttacctatgatcatttgtgtaagaattgtcatcatgtaatagccagacatgagtat
acattcagtatcatggatgaatttcagaactcagaacccaagtctgatcaggagaaaaac
atcacacaaattccaattgagaagcattctttaaaatacctaaccagtacttctcaaaac
tatcaaggccataaaaaacaaggaaaatctgagacatggtcacagccaagaggagcctga

>gi568815584r:64848668_65072076|GENSCAN_predicted_peptide_4|136_aa
MAFIAKSFYDLSAISLDGEKENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHP
VFAYLKDKLPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFP
TINIEPDIKRLLKVAI

>gi568815584r:64848668_65072076|GENSCAN_predicted_CDS_4|411_bp
atggctttcattgccaagtccttctatgacctcagtgccatcagcctggatggggagaag
gagaactgtcagaatgaggagatcctgaacagtctcaagtatgtccgtcctgggggtgga
taccagcccaccttcacccttgtccaaaaatgtgaggtgaatgggcagaacgagcatcct
gtcttcgcctacctgaaggacaagctcccctacccttatgatgacccattttccctcatg
accgatcccaagctcatcatttggagccctgtgcgccgctcagatgtggcctggaacttt
gagaagttcctcatagggccggagggagagcccttccgacgctacagccgcaccttccca
accatcaacattgagcctgacatcaagcgcctccttaaagttgccatatag

>gi568815584r:64848668_65072076|GENSCAN_predicted_peptide_5|315_aa
METGVRIQILLKAFLPRFPAPLAPVMAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHS
SHISTIAWATEEDSVKKKEKRHQVCQGVREKASGMPGRVGKGIGYAREAFIQQREVLSSG
KNQQPRREREGATMGTGYWGQGLTGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQY
YRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQ
QLAKEYGMDFYETSACTNLNIKESFTRLTELVLQAHRKELEGLRMRASNELALAELEEEE
GKPEGPANSSKTCWC

>gi568815584r:64848668_65072076|GENSCAN_predicted_CDS_5|948_bp
atggagacgggtgttcgaatccagatcctgctcaaggccttcctacctcggttcccggcc
ccgctggccccagtcatggcgaagcagtacgatgtgctgttccggctgctgctgatcggg
gactccggggtgggcaagacctgcctgctgtgccgcttcaccgacaacgagttccactcc
tcgcacatctccaccatcgcctgggcgacagaggaagactccgtcaagaaaaaagagaaa
aggcatcaggtatgccagggtgtgcgggaaaaggcatcgggtatgccagggcgtgtggga
aaaggcatcgggtatgccagggaagcctttattcagcagagggaagtgctcagcagtgga
aaaaaccaacagccacgcagggagagggaaggagccacgatgggcacgggttactggggc
cagggcttgactggtgttgactttaagatgaagaccatagaggtagacggcatcaaagtg
cggatacagatctgggacactgcagggcaggagagataccagaccatcacaaagcagtac
tatcggcgggcccaggggatatttttggtctatgacattagcagcgagcgctcttaccag
cacatcatgaagtgggtcagtgacgtggatgagtacgcaccagaaggcgtccagaagatc
cttattgggaataaggctgatgaggagcagaaacggcaggtgggaagagagcaagggcag
cagctggcgaaggagtatggcatggacttctatgaaacaagtgcctgcaccaacctcaac
attaaagagtcattcacgcgtctgacagagctggtgctgcaggcccataggaaggagctg
gaaggcctccggatgcgtgccagcaatgagttggcactggcagagctggaggaggaggag
ggcaaacccgagggcccagcgaactcttcgaaaacctgctggtgctga

>gi568815584r:64848668_65072076|GENSCAN_predicted_peptide_6|542_aa
MYYYTVSQDIKGNNSFRHTACMSENRENEPLYSLRPEHARERLQDDSVETVTSIEQMREE
AIMDLVQEYSGQRKQQAQRTKAAECQAKVEEKIQEVFSSYKFNHLVPRKDFWIESHRLFC
QTKKEVQPLCFARPVQVAMGGTFHLKASIADLKAKDSDWLQNTVLWPGLWVTRGRLVLQR
EKHFHYLKRGLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELCQS
PEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLMHV
GGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCG
LAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRAL
HAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQH
FGSGAMLHDVVLGVPENALQPTHPVYNIGPDKVIQATTYFLQKPVPGFEELKDETSAEPA
TD

>gi568815584r:64848668_65072076|GENSCAN_predicted_CDS_6|1629_bp
atgtattactacacagtttcacaagatattaaaggaaacaattcattccgacatacggct
tgtatgagtgaaaacagggagaacgagccgctgtacagtctgaggcccgagcacgcgcga
gagcggttgcaggacgactcggtggaaacagtcacgtccatagaacagatgagggaggaa
gccatcatggatctggtgcaagagtattctgggcagagaaagcagcaagcacaaaggacc
aaggcagcagaatgccaggcaaaagtagaagaaaagatccaagaggtcttcagttcttac
aagttcaaccaccttgtaccaagaaaagatttttggatagagtcacacaggctcttctgc
cagaccaagaaagaagtgcagcctctgtgctttgcccggcctgtgcaggtggccatgggc
ggcacattccatcttaaagccagtattgctgacttgaaagccaaggacagcgactggctg
cagaacacggtcctctggccagggctgtgggtcacacgtgggaggcttgttttgcagagg
gagaagcacttccattatctgaaaagaggccttcgacaactgacagatgcctatgagtgt
ctggatgccagccgcccatggctctgctattggatcctgcacagcttggaactgctagat
gaacccatcccccagatagtggctacagatgtgtgtcagttcctggagctgtgtcagagc
ccagaaggtggctttggaggaggacccggtcagtatccacaccttgcacccacatatgca
gcagtcaatgcattgtgcatcattggcaccgaggaggcctatgacatcattaacagagag
aagcttcttcagtatttgtactccctgaagcaacctgacggctcctttctcatgcatgtc
ggaggtgaggtggatgtgagaagcgcatactgtgctgcctccgtagcctcgctgaccaac
atcatcactccagacctctttgagggcactgctgaatggatagcaaggtgtcagaactgg
gaaggtggcattggcggggtaccagggatggaagcccatggtggctataccttctgtggc
ctggccgcgctggtaatcctcaagagggaacgttccttgaacttgaagagcttattacaa
tgggtgacaagccggcagatgcgatttgaaggaggatttcagggccgctgcaacaagctg
gtggatggctgctactccttctggcaggcggggctcctgcccctgctccaccgcgcactg
cacgcccaaggtgaccctgcccttagcatgagccactggatgttccatcagcaggccctg
caggagtacatcctgatgtgctgccagtgccctgcgggggggcttctggataaacctggc
aagtcgcgtgatttctaccacacctgctactgcctgagcggcctgtccatagcccagcac
ttcggcagcggagccatgttgcatgatgtggtcctgggtgtgcccgaaaacgctctgcag
cccactcacccagtgtacaacattggaccagacaaggtgatccaggccactacatacttt
ctacagaagccagtcccaggttttgaggagcttaaggatgagacatcggcagagcctgca
accgactag

>gi568815584r:64848668_65072076|GENSCAN_predicted_peptide_7|114_aa
MALITWLPRPTWPLDFQLYETMWVKQAYYLPFTTGETGWRAYVNHPRFPSCQVVVPEPEP
VSAASKAHALPPPQASEGRAVDGTSRQETMKLSSTVHGSHGLPGCQAASRIPDE

>gi568815584r:64848668_65072076|GENSCAN_predicted_CDS_7|345_bp
atggccctgatcacatggctcccgaggcccacgtggcctctggattttcagttatatgag
acaatgtgggtgaagcaggcgtattacctgccttttacaactggagaaacaggttggaga
gcttacgtaaatcacccaaggtttcccagctgtcaagtggtggtgcctgagcccgagccc
gtatctgctgcctccaaagcccatgcccttccaccaccgcaggcctctgaaggaagagct
gttgatggcaccagcagacaggaaacaatgaagctctcaagcactgtgcatgggagccat
gggctgccgggctgccaggctgccagccggattccggatgagtga