GENSCAN 1.0	Date run:  5-Nov-116	Time: 22:46:22

Sequence gi568815584r:60546286_60749189 : 202904 bp : 40.93% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -     50     45    6                               1.05
 1.02 Term -   4549   4248  302  2  2   61   42   168 0.639   3.90
 1.01 Init -   8053   7906  148  1  1   85   68    64 0.354   4.40
 1.00 Prom -  17698  17659   40                              -5.05

 2.00 Prom +  24563  24602   40                              -4.95
 2.01 Init +  59296  59680  385  0  1   78   31   214 0.636  11.76
 2.02 Intr +  63185  63313  129  0  0   98   78    73 0.068   7.05
 2.03 Intr +  70424  70528  105  0  0   90   98    71 0.984   7.57
 2.04 Term +  71843  72003  161  0  2   73   41   181 0.971   9.02
 2.05 PlyA +  72185  72190    6                               1.05

 3.07 PlyA -  75011  75006    6                               1.05
 3.06 Term -  91545  91334  212  1  2   81   49   177 0.393   9.57
 3.05 Intr -  92308  92251   58  1  1   60   97    15 0.593  -2.86
 3.04 Intr -  95443  95278  166  0  1   69   96   171 0.932  15.04
 3.03 Intr -  96009  95816  194  0  2   74   80    80 0.774   3.17
 3.02 Intr - 100292 100016  277  1  1   84    3   164 0.612   4.10
 3.01 Init - 102904 102345  560  1  2   85  107   568 0.975  50.91
 3.00 Prom - 105127 105088   40                              -7.05

 4.06 PlyA - 105627 105622    6                              -0.45
 4.05 Term - 106474 106089  386  2  2   73   48   145 0.430   3.07
 4.04 Intr - 109232 109019  214  2  1   47   37   156 0.517   3.77
 4.03 Intr - 110478 110194  285  0  0   72   59   168 0.658   8.91
 4.02 Intr - 111000 110791  210  0  0  107   76   165 0.475  15.39
 4.01 Init - 111613 111392  222  1  0   57   59   189 0.609   9.53
 4.00 Prom - 113151 113112   40                              -4.55

 5.03 PlyA - 113454 113449    6                               1.05
 5.02 Term - 142592 142408  185  0  2   35   44   234 0.838  10.42
 5.01 Init - 150003 149955   49  0  1   86   58    40 0.435  -0.04
 5.00 Prom - 164522 164483   40                              -6.35

 6.05 PlyA - 165641 165636    6                               1.05
 6.04 Term - 167918 167122  797  0  2  100   43   573 0.946  46.45
 6.03 Intr - 174160 173421  740  0  2   80   87   410 0.630  30.25
 6.02 Intr - 175860 175468  393  2  0   -6    0   319 0.463   6.54
 6.01 Init - 177726 176927  800  0  2   35  105   867 0.556  75.32
 6.00 Prom - 178620 178581   40                              -8.45

 7.00 Prom + 184421 184460   40                              -5.15
 7.01 Sngl + 184475 184861  387  1  0   71   39   186 0.897   7.96
 7.02 PlyA + 185540 185545    6                               1.05

 8.03 PlyA - 186296 186291    6                               1.05
 8.02 Term - 188690 188381  310  1  1  116   49   326 0.983  25.05
 8.01 Intr - 202479 202332  148  1  1   11   25   173 0.091   1.67

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  67687  67741   55  0  1   59   60    59 0.892   1.70


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:60546286_60749189|GENSCAN_predicted_peptide_1|149_aa
MMKSVTGNMMKKRSSLPHCESFTNKRPSISVWFLPWVIEQKEVFLKACTDMNPGTLSSFV
STSQPEKQPHGMPHGTPLANMPPGQPSSCTSMSQAREAALWPTPSRHTPMPAEKPCDHVL
GLRNSPVGCPLWTCLQASQATTCPCALPE

>gi568815584r:60546286_60749189|GENSCAN_predicted_CDS_1|450_bp
atgatgaagtcagtgacggggaacatgatgaagaagagatcttccttgcctcactgtgag
tccttcaccaacaagcggccatccatttctgtctggttcctgccctgggtgattgaacaa
aaggaggtttttttgaaagcatgcactgacatgaatccaggcacgctgagcagctttgta
tccacatcccagcctgagaaacagccccatgggatgccccatgggacacccctggcaaat
atgcccccaggtcaaccaagcagctgtacctccatgtcccaagctagagaagcagccctg
tggcccacccccagcaggcacacacccatgccagctgagaagccctgtgaccatgtcctg
ggcctgagaaacagccctgtgggctgccccttgtggacatgcctccaggccagccaagca
actacatgcccatgtgctctgccagagtaa

>gi568815584r:60546286_60749189|GENSCAN_predicted_peptide_2|259_aa
MVSCDPAASAPAVAIRGQCTAQAAHTAQAIASEGARPKPWWLTCGVEPVGAQKSRIEVWE
PLSRFQRMYGNAWMSRQKFAAGVESSWKTSAGVVWKVKVRLEAPNGVPTGALGGRAVRRG
PPPFRPQNAILPLSQEVKFVTSNHKSPEFFHTNKHGATGESETYRKEEVKRGPLRAVFPH
LPPPFSNKVQNQQSVLTSTCKRLRAPGFSLLTFQHVPTHRSSYIPHLVVSDTQTGYRVCA
NKMTTKPDLPLGTLEPVEV

>gi568815584r:60546286_60749189|GENSCAN_predicted_CDS_2|780_bp
atggtgtcctgtgacccagctgcctcagctccagctgtggctataaggggccaatgtaca
gctcaggctgcacatacagctcaggccattgcctcagagggtgcaagacccaagccttgg
tggcttacatgtggtgttgaacctgtgggtgcacagaagtcaagaattgaggtttgggaa
cctctgtctagatttcagaggatgtatggaaatgcctggatgtccaggcagaagtttgct
gcaggggtggagtcctcatggaaaacttctgctggggtagtgtggaaagtaaaggtgagg
ttggaggccccaaacggagtccccactggggcactgggtggcagagctgtgagaagaggg
ccaccacccttcagaccccagaatgctattcttcctctttctcaagaggtcaagtttgtt
accagcaatcacaagagccctgagttcttccacaccaacaaacatggtgccactggggaa
tctgagacatacagaaaggaggaggtgaaaagaggccccttaagagctgtcttcccacac
cttccaccccctttctccaataaagtccaaaatcagcaatcagtgttgacatcaacgtgc
aaacggcttagagccccaggtttttccctactaacttttcagcatgttcccacccatcga
agttcttatattccacatttagtagtatcggatacacaaacaggctacagagtctgtgca
aataaaatgactaccaagcctgatcttccattgggaactctagagcccgtggaagtttga

>gi568815584r:60546286_60749189|GENSCAN_predicted_peptide_3|488_aa
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQGNMGH
ARSSNYSLPGLTASQPSHGLQTHQHQLQDSLLGPLTSSLAPRFPHRADGAGLGSWFGGGL
GPAADSPVPFLLQTPPVSFFASWGLGFGFRTQTLHPRALRRGASFPLEGTLKTLGDYLLQ
LPEASALVCVPTAPPWTIHTEGPEGSVSSPARVFRDLSQFPQVLNPTKMRIPQTKKLQGS
TRSGKEKPLPPALRRPLQASAASALGAWAARPPGHEGPEAPEGLSGGPAQPLRPLLARLE
APGLQASS

>gi568815584r:60546286_60749189|GENSCAN_predicted_CDS_3|1467_bp
atgtcgatgctgccgtcgtttggctttacgcaggagcaagtggcgtgcgtgtgcgaggtt
ctgcagcaaggcggaaacctggagcgcctgggcaggttcctgtggtcactgcccgcctgc
gaccacctgcacaagaacgagagcgtactcaaggccaaggcggtggtcgccttccaccgc
ggcaacttccgtgagctctacaagatcctggagagccaccagttctcgcctcacaaccac
cccaaactgcagcaactgtggctgaaggcgcattacgtggaggccgagaagctgcgcggc
cgacccctgggcgccgtgggcaaatatcgggtgcgccgaaaatttccactgccgcgcacc
atctgggacggcgaggagaccagctactgcttcaaggagaagtcgaggggtgtcctgcgg
gagtggtacgcgcacaatccctacccatcgccgcgtgagaagcgggagctggccgaggcc
accggcctcaccaccacccaggtcagcaactggtttaagaaccggaggcaaagagaccgg
gccgcggaggccaaggaaagggagaacaccgaaaacaataactcctcctccaacaagcag
aaccaactctctcctctggaagggggcaagccgctcatgtccagctcagaagaggaattc
tcacctccccaaagtccagaccagaactcggtccttctgctgcagggcaatatgggccac
gccaggagctcaaactattctctcccgggcttaacagcctcgcagcccagtcacggcctg
cagacccaccagcatcagctccaagactctctgctcggccccctcacctccagtctggcc
ccgcgcttcccgcacagggcagatggcgcaggccttggatcctggttcggaggcggccta
ggccctgctgccgattctccagtgcccttcttgcttcagacacctcctgtctccttcttc
gcttcctggggtcttggctttggttttcggacccaaactcttcacccgcgcgctctgagg
aggggtgccagctttcccttggaggggactctaaaaactctcggagactacctccttcag
ctgcccgaagccagcgcactagtgtgtgtccccaccgcgcccccatggacaattcacact
gagggacccgaaggctcagtctcatcgcctgcacgcgtgttccgcgaccttagccagttt
ccccaagttctaaatcctaccaagatgagaatcccacaaactaagaaattgcaagggtca
acccggagtgggaaggaaaagccgctgcctccggccctgcgtcgacccctgcaggctagc
gcggcctctgctctaggggcttgggccgcgcggcctccaggccatgagggcccagaggcc
cccgagggcctcagcggaggcccagcccagcctttgcggcccctacttgcccgcttggag
gctccaggactccaggccagctcttag

>gi568815584r:60546286_60749189|GENSCAN_predicted_peptide_4|438_aa
MRGQKHCHLLRRFNANDWLGSRLPAADSTKPRSQLGFMKGDPDFPARLGQIEAPHSPAKR
RRPYPNASSFWREKAPAPLPSSPDACGPHAPPEGTTPESAGPARRDSATSGYKPGRSRPR
RRRGAQELPHSPGREFLVQAAGRREGFVKHCSGVGNLVAKSKPKRVGETRRGAWMSGHLP
STLYPVSLFPLLRGLVIQTNAARPFWEQRRSSFCLRKSGSFRTRAICSCENAKTDPTAWG
EFGPGKWGKEKRVAKGFRVAAPRVQTSALPSRPACCGSHAVRVSLSFSSNQPPHLEVISS
REETCPPGISGRVESSPSFWMVKEFQESGPGAPNYLATSQKGNKWVPARGVCIKACQPSR
ETLATANAVPLNAFSSTKAHAAVTCTEEALESRNLASGAPCQRCSLPSRAAARAAAGWLE
LLISFKSPTHLCFSCDLH

>gi568815584r:60546286_60749189|GENSCAN_predicted_CDS_4|1317_bp
atgcgcggccaaaagcattgccacttgctgcggcgcttcaacgcgaatgactggctgggg
tcgcggcttccggccgcagattccacgaaaccgagaagccaactcggcttcatgaaagga
gatcccgatttccccgctcgcctcgggcaaattgaggcacctcattcgccagcgaagcgt
cgccgtccttatcccaacgcctccagtttttggagggaaaaagccccggcccctcttccc
tcaagccccgacgcctgtgggccccatgcaccgcccgagggaacaaccccagagagcgcc
gggccagcccggcgagatagcgcgacctctggctacaagcctgggcggagtcggccccgg
cgcagacgcggcgcccaagagctcccgcacagcccggggagggagtttctggtgcaggcg
gcggggcgacgggagggctttgtcaagcactgcagcggtgttggaaaccttgttgcaaag
tccaagcctaagcgagtgggcgagacgcgcagaggggcatggatgagtgggcaccttccc
agcaccctctacccagtatctcttttcccactgctcagaggactggtgattcagacaaac
gccgctcggcccttttgggaacagaggcggtcgagcttctgtctgcgaaaatctggatcc
tttagaacccgagcaatatgctcgtgtgagaatgcaaaaacagatcccacggcttggggt
gagtttgggcctggaaaatgggggaaagaaaagagagtagcgaaaggttttcgggttgcg
gcgccccgcgtgcagacgtctgctctccccagccgcccagcctgctgtggcagccacgct
gtgcgcgtgtctttatccttcagttcaaaccagcccccacatcttgaagtaatcagcagc
cgagaagagacttgtccccctggcatctcaggtagagtagaatcctcaccgtcgttctgg
atggtgaaagaattccaagaaagcggcccgggagcccctaactatcttgctacaagccag
aagggaaacaagtgggtcccagctaggggtgtttgcatcaaggcctgtcaacccagccga
gaaaccctagcaacagctaatgctgtcccactgaatgctttttcatcgactaaagcgcac
gcggccgttacctgcacagaggaggcactggagagccgaaacctggcatcgggcgctcct
tgccagcggtgttccctcccgagccgcgctgcagcgagggcagcagccggctggctagag
ttgctcatttcctttaaatctccaacgcatctctgcttttcgtgcgatttgcattga

>gi568815584r:60546286_60749189|GENSCAN_predicted_peptide_5|77_aa
MGFLHVGQAGLELLTSGSWRFEQRIGQNVQQSKERMMQRKNKCRDLLQMKVRSTAWERPE
QRPKGSRYRIFSGPNNG

>gi568815584r:60546286_60749189|GENSCAN_predicted_CDS_5|234_bp
atggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggttcttggcgt
tttgaacaaagaattggacaaaatgtacagcagagcaaggaaagaatgatgcagcgaaag
aacaaatgcagagatttattgcaaatgaaagtacgctccacagcgtgggagcggccagag
cagcggcccaagggctccagatacagaatcttctccggtccaaacaacggctag

>gi568815584r:60546286_60749189|GENSCAN_predicted_peptide_6|909_aa
MESASEGQEAHREVAGGAAVGLSPPAPAPFPLEPGDAATAAARVSGEEGAVAAAAAGAAA
DQVQLHSELLGRHHHAAAAAAQTPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDL
LRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWYKARYTEAERARGRP
LGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITG
LSLTQVSNWFKNRRQRDRNPSETQSKRRERIQKQLEGSSRGSKLGAGDPARLRQVKVITS
AFQSRSQPALAASGPLWGSDGSGSGVPRPRLGGRLGALSGPRGNQNKRCTGMCVRLPQIC
GEVQRRRFGYAEPPALRPLEAADPALGNQRNPQGRGRGESDGNPSTEDESSKGHEDLSPH
PLSSSSDGITNLSLSSHMEPVYMQQIGNAKISLSSSGVLLNGSLVPASTSPVFLNGNSFI
QGPSGVILNGLNVGNTQAVALNPPKMSSNIVSNGISMTDILGSTSQDVKEFKVLQSSANS
ATTTSYSPSVPVSFPGLIPSTEVKREGIQTVASQDGGSVVTFTTPVQINQYGIVQIPNSG
ANSQFLNGSIGFSPLQLPPVSVAASQGNNLIWYLNAPANVFISCCNISVSSSTSDGSTFT
SESTTVQQGKVFLSSLAPSAVVYTVPNTGQTIGSVKQEGLERSLVFSQLMPVNQNAQVNA
NLSSENISGSGLHPLASSLVNVSPTHNFSLSPSTLLNPTELNRDIADSQPMSAPVASKST
VTSVSNTNYATLQNCSLITGQDLLSVPMTQAALGEIVPTAEDQVGHPSPAVHQDFVQEHR
LVLQSVANMKENFLSNSESKATSSLMMLDSKSKYVLDGMVDTVCEDLETDKKELAKLQTV
QLDEDMQDL

>gi568815584r:60546286_60749189|GENSCAN_predicted_CDS_6|2730_bp
atggaaagcgcctcggaagggcaggaggcgcaccgagaagtggcggggggcgcggcggta
gggctgagccccccggctccagccccttttcccctggagccgggggacgccgcgaccgct
gccgccagggtgagcggagaggaaggggcagtggcggcggcggcggccggagcggcggcg
gatcaggtacaactccactcggaacttctgggcaggcaccaccacgccgccgccgccgcc
gcgcagaccccgctggccttctcgcccgaccacgtcgcctgcgtgtgcgaggcactgcag
caggggggcaacctggaccgcctggcccggttcctgtggtccctgccccagagcgacctg
ctacgtggcaacgagagcctgctgaaggcgcgggcgctcgtggccttccaccagggcatc
taccccgagctctacagcatcctcgagagccacagcttcgagtcggccaaccacccgctg
ctgcagcagctctggtacaaggcgcgctacaccgaggccgagcgagcccgcggccggccg
ctgggagccgtagacaagtaccggctgcgcaggaaattccccctgccccgcaccatctgg
gacggcgaggagacggtgtattgtttcaaggagaagtcgcgcaacgcgctcaaggagctc
tacaagcagaatcgctacccttcgcccgccgagaagcggcacctggccaagatcaccggc
ctctccctcacccaggtcagcaactggttcaagaaccgccggcagcgcgacaggaacccc
tccgagacccagtccaaaaggagagaaagaatccaaaagcagctcgaaggttcttctcgg
ggaagcaaactgggagccggggatccagcccgcctgcgccaggtgaaggtgatcaccagc
gcattccagagccggtctcagcccgcccttgccgcttctgggcccctgtgggggtccgac
ggctcgggctccggcgttcctcgcccaaggctgggagggaggcttggtgccctatccggc
cctcgcggtaaccaaaacaaaaggtgcaccgggatgtgcgtgcgccttccgcagatatgc
ggagaggtccagagaaggcgctttggttacgccgagccacctgccctgcgcccactagag
gccgcggatcccgcgctcggaaaccaacggaatccgcagggccggggcagaggtgagtca
gatggcaaccccagcactgaagatgaatccagcaagggacatgaggatttatctcctcac
ccactctccagttcatctgatggcatcaccaacctcagcctttccagtcatatggagcca
gtatatatgcaacaaattggaaatgctaagatatcattaagctcttctggagttctgttg
aatggaagcttggtacctgcaagtacttcacctgtcttccttaatggaaattcttttatt
cagggacccagtggagttatccttaatggattaaatgtgggaaatacacaggcagtggca
ttgaacccaccaaaaatgtcatcaaacattgtgagcaatggtatatccatgactgacata
ctggggtctacttcccaggacgtgaaggaattcaaagtcctccagagttctgctaactca
gcaaccaccacgtcctacagccccagtgtccctgtctcattcccaggcctgatacccagc
actgaggtgaaaagagaaggcattcaaacagtggcttcccaagatggagggtctgtagtg
acttttactacaccagtgcaaattaaccagtatggcattgtccagatccccaattccgga
gcaaacagccagttccttaatgggagcattggattctctccactgcagctgccccctgtg
tcagtggcagcttcacaaggtaacaatctcatttggtaccttaatgcaccagcaaatgtg
ttcatcagctgctgtaatatctcagtaagctcaagcacttcagatggaagcacatttaca
agtgagtctaccacagtccagcaaggaaaggttttcttgagctctcttgctcccagtgca
gtggtatacacggttcctaatacaggccagactataggatctgtgaaacaggaaggcttg
gaaaggagcctggtattttctcagttgatgcctgtcaatcagaatgcacaagtaaatgca
aacctgtcttctgaaaacatctcggggagtggcctgcatccactggcctcctcattagtt
aatgtatctccaactcacaatttttctctcagtccctctacactactaaatcccactgag
ctaaaccgcgacattgccgatagccaaccaatgtctgcaccggtggcaagcaaatctact
gtgacatctgtcagcaacactaactatgcaactcttcagaactgctcccttattactggt
caagacctattgtcagtccctatgactcaggctgcccttggggaaatagttcctacagct
gaagatcaggtaggtcacccctccccagcagtacatcaggattttgtccaagaacatcgt
ttggttctgcaatcggtagctaacatgaaagagaatttcttatcaaattctgagagcaaa
gcaacaagtagcttaatgatgctggactctaaatccaagtatgtcttagatggcatggtt
gatactgtctgtgaagacctggaaacagacaaaaaagagcttgccaagctccagactgtc
cagctggatgaagatatgcaagacttatga

>gi568815584r:60546286_60749189|GENSCAN_predicted_peptide_7|128_aa
MGKDFMTKTPKAMATKAKIDKWDLMKLKSFCTAKETTIRMNRQPTDWEKIFGIYSSDKGL
ISRIYKELKQIYKKKVKQPHQKVDKGYEQTLFQRRDLCSQQTHETMLIITGHQRNANQNH
NEIPPHTS

>gi568815584r:60546286_60749189|GENSCAN_predicted_CDS_7|387_bp
atgggcaaggacttcatgactaaaacaccaaaagcaatggcaacaaaagctaaaatagac
aaatgggatctaatgaaactaaagagcttctgcacagcaaaagaaactaccatcagaatg
aacaggcaacctacagactgggagaaaatttttggaatctactcatctgacaaagggcta
atatccagaatctacaaagaacttaaacaaatttacaagaaaaaagtcaaacaaccccat
caaaaagtggacaaaggatatgaacagacacttttccaaagaagagatttatgcagccaa
cagacacatgaaacaatgctcatcatcactggtcatcagagaaatgcaaatcaaaaccac
aatgagataccacctcacaccagttag

>gi568815584r:60546286_60749189|GENSCAN_predicted_peptide_8|152_aa
XSADHSGSILEEGIVITEDDNFMHVIALEDSPMRKNVERGDSDIDDPDPVESTAAQLTEC
VRTHSPSASRRGSDIWWSYTEGNPDRPWRFPSYRLSQAPVSARATYKPPQTRPSRFLPTG
AWQRRSLRERAPARGEALQHKRSGSQFPRSCI

>gi568815584r:60546286_60749189|GENSCAN_predicted_CDS_8|459_bp
ncctcagcagatcattccggaagtattctagaagaaggcattgttatcacagaagatgac
aacttcatgcatgttattgctctcgaagactctccaatgagaaaaaacgtggagagggga
gacagtgatattgatgatcctgaccctgtggaatccactgccgcccaactcacagagtgt
gtccgcacacattcaccatcagcttcaaggaggggttccgatatttggtggtcttacacc
gagggcaaccctgatcgtccatggcggtttccctcctacagactctcgcaggcgcctgtt
tcagccagagccacctacaagccccctcagacgcgaccaagcaggttcctaccaacaggc
gcttggcagagacggtcccttcgcgaaagagcaccggcaaggggcgaggcgctgcaacac
aaacgttccggcagtcagttcccccggtcttgcatctag