GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:30:33

Sequence gi568815584f:54409960_54638380 : 228421 bp : 40.55% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1574   1747  174  2  0   27   60   154 0.367   4.63
 1.02 Intr +   5940   5971   32  0  2   88   91    26 0.744  -0.24
 1.03 Intr +   7892   7992  101  0  2   41  100    73 0.624   2.71
 1.04 Term +  10587  10757  171  2  0   91   49   192 0.995  12.44
 1.05 PlyA +  11686  11691    6                               1.05

 2.21 PlyA -  11814  11809    6                               1.05
 2.20 Term -  13680  13664   17  1  2   88   41    23 0.059  -4.98
 2.19 Intr -  19472  19269  204  0  0  115   72   136 0.662  12.95
 2.18 Intr -  20445  20366   80  2  2   89  -24    74 0.161  -5.42
 2.17 Intr -  22261  22149  113  1  2  108   75    -2 0.252  -1.24
 2.16 Intr -  26478  26410   69  0  0   48  105    84 0.529   4.56
 2.15 Intr -  31510  31288  223  0  1    9   94   323 0.079  22.21
 2.14 Intr -  33509  33308  202  0  1   42   97    57 0.004  -0.58
 2.13 Intr -  34554  34432  123  1  0   89   89     7 0.007   0.54
 2.12 Intr -  36321  36256   66  1  0   84   54    68 0.118   0.96
 2.11 Intr -  37458  37333  126  1  0   76   47   129 0.125   7.33
 2.10 Intr -  40248  40155   94  0  1   98   11    95 0.121   1.42
 2.09 Intr -  61136  61010  127  1  1   32   72   173 0.079   9.86
 2.08 Intr -  63205  63058  148  2  1  109    5    80 0.068   0.17
 2.07 Intr -  68200  68155   46  1  1   85   46    69 0.088  -0.54
 2.06 Intr -  71499  71407   93  0  0   68   29   117 0.004   3.04
 2.05 Intr -  72243  72194   50  1  2   60   68   101 0.992   2.78
 2.04 Intr -  73808  73712   97  2  1   99   71   156 0.997  13.66
 2.03 Intr -  78449  78364   86  0  2   98   25    70 0.053   0.32
 2.02 Intr -  95368  95233  136  1  1  111   80    96 0.104  10.32
 2.01 Init -  96925  96866   60  1  0   70   34    53 0.036  -0.60
 2.00 Prom -  98732  98693   40                              -6.25

 3.06 PlyA -  99297  99292    6                               1.05
 3.05 Term - 100251  99941  311  1  2   68   52   350 0.632  23.64
 3.04 Intr - 100370 100281   90  0  0   60   61   168 0.932  10.35
 3.03 Intr - 102305 102192  114  0  0   81   22    81 0.296   0.30
 3.02 Intr - 107977 107898   80  0  2   54   89    53 0.255   0.28
 3.01 Init - 110626 110505  122  1  2   69   27   136 0.308   5.31
 3.00 Prom - 112937 112898   40                              -6.35

 4.00 Prom + 118705 118744   40                              -6.65
 4.01 Init + 119169 119264   96  2  0   87    2    91 0.353   0.76
 4.02 Intr + 120915 121091  177  2  0   46   87   102 0.515   5.09
 4.03 Term + 128104 128424  321  0  0   83   49   113 0.350   0.74
 4.04 PlyA + 129304 129309    6                               1.05

 5.09 PlyA - 129343 129338    6                               1.05
 5.08 Term - 156714 156395  320  1  2   42   46   202 0.744   5.46
 5.07 Intr - 157065 156986   80  2  2  132   52   100 0.196   9.08
 5.06 Intr - 157630 157323  308  1  2   76   80   156 0.280   7.92
 5.05 Intr - 157890 157817   74  1  2   53   84   162 0.658  10.51
 5.04 Intr - 158245 157957  289  1  1   21   25   321 0.368  15.00
 5.03 Intr - 158445 158342  104  1  2   97  107   113 0.838  13.07
 5.02 Intr - 174395 174264  132  0  0   54   93    44 0.147   1.20
 5.01 Init - 177540 177090  451  0  1   86   43   154 0.214   6.82
 5.00 Prom - 185467 185428   40                              -5.75

 6.00 Prom + 191420 191459   40                              -5.95
 6.01 Init + 196913 197136  224  1  2  109   47   137 0.947   9.80
 6.02 Intr + 201344 201563  220  2  1   70   32   157 0.109   5.68
 6.03 Intr + 212801 212941  141  1  0   37   74    96 0.179   2.73
 6.04 Term + 218412 218564  153  2  0   39   43   155 0.209   3.04
 6.05 PlyA + 218575 218580    6                               1.05

 7.03 PlyA - 219463 219458    6                               1.05
 7.02 Term - 223667 223566  102  2  0   81   33    78 0.473  -1.10
 7.01 Init - 224620 224462  159  1  0   72   81   112 0.760   8.77

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  71499  71394  106  0  1   68   33   136 0.985   4.97


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:54409960_54638380|GENSCAN_predicted_peptide_1|159_aa
XGELSKYRVPNLLDLYQQCGIITHHHPIADGGTPDIASCCEIMEELTTCLKNYRKTLIHC
YGGLGRSCLAACLLLYLSDTISPEQAIDSLRDLRGSGAIQTIKTSGIEKDPVSLPLAPSQ
YWISPKGVYSLWAGTFSETRNSLVQTAAPPFVRPRNYTE

>gi568815584f:54409960_54638380|GENSCAN_predicted_CDS_1|480_bp
nnaggggaactgtcaaaatatagagtcccaaaccttctggatctctaccagcaatgtgga
attatcacccatcatcatccaatcgcagatggagggactcctgacatagccagctgctgt
gaaataatggaagagcttacaacctgccttaaaaattaccgaaaaaccttaatacactgc
tatggaggacttgggagatcttgtcttgctgcttgtctcctactatacctgtctgacaca
atatcaccagagcaagccatagacagcctgcgagacctaagaggatccggggcaatacag
accatcaagacctccggaattgaaaaggatcctgtgagtcttccactcgccccctcccag
tactggatcagccccaagggtgtttattcactatgggctggaacattttcagagacaagg
aattcactggttcagacagctgctccaccttttgtccgccctaggaactacacggaatga

>gi568815584f:54409960_54638380|GENSCAN_predicted_peptide_2|719_aa
MPNQATSATECHCSSTMVKVLFMAFSRNKAEARTGGYDAAPALALSPLHTPADHKQKTFL
PSYLAASYRGFLLIFAFLWQLETFRPKALALGLKSESLVVCDVAEDLVEKLRKFRFRKET
NNAAIIMKIDKDKRLVVLDEELEGISPDELKDELPERQPRYPFLSALKDLFSLVVFEIRN
TEDLTEEWLRGITELVEPDYQLITGSTLWCFRTQGLQNISSTDLMFYNSDFIPRNNLGRR
HLSGVVEEDPPSVWVSTIQSAGALERTKTEKANMPVYPVELVRTQCFSPSGDAAIRRHLG
RRQQPSPDTNPAGTPSAKGRMDDTATNIEKLHPAGQPEALYLHAAVTQGFGKVHRLQAAD
LCLAVQIGNMASGGSDESNFTKNVIGFYYFKKEIEMRLCLELVGSWSDFKNEATDPRGGA
ACQSRAVHPHSSALGWSMGLGAMEQGVALAGEAWAAQEPMEGVGGSGMAGCRSRALPRGK
AAKARRAERAGAAAVAVAVAAVAGGSEWFYPEGPAPPFSAGNGAAPRSSSPAMAFTFAAF
CYMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMFLC
AAEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNADILAYCQGVSASALLTLLG
CVGISVGSCPVYHGTFSSIPGLYPLVAMSTLLPPHDNQKCLWTLPDVLRGKIALENALK

>gi568815584f:54409960_54638380|GENSCAN_predicted_CDS_2|2160_bp
atgcccaatcaggctacctctgccactgaatgccattgctctagcaccatggtgaaggtg
ctttttatggccttttcacggaacaaggcggaagccagaacgggtggatatgatgctgca
cctgctctagccctttctcctctccacactccagcagatcacaagcagaagactttccta
ccctcctacttggcagcttcctacagaggatttctccttatctttgctttcctatggcag
ttggaaacctttcgacccaaagctttggcactgggccttaaaagtgagtctttggttgtt
tgtgatgttgccgaagatttagtggaaaagctgagaaagtttcgttttcgcaaagaaacg
aacaacgctgctattataatgaagattgacaaggataaacgcctggtggtactggatgag
gagcttgagggcatttcaccagatgaacttaaagatgaactacctgaacgacaacctcga
tatccttttcttagtgctttaaaagatttattttctttagtggtatttgaaataagaaat
accgaagacctaactgaagaatggttacgtgggatcacagaactggttgagccagattac
cagctcatcacaggctcgaccctgtggtgcttcagaacacagggtctgcagaatatctca
agcactgatcttatgttttacaacagtgattttatccccaggaacaatttggggagacgg
catctgagtggagtagtggaggaagatccaccctcggtgtgggtaagcaccatccaatct
gctggggccctggaaagaacaaaaacagaaaaggcaaatatgccagtctacccggtggag
ctggtgagaacacagtgtttctccccttcaggggatgcagcaataaggcgccatcttgga
aggagacagcagccctcaccagacaccaatcctgctggcactcccagtgcaaagggcaga
atggatgacacagccaccaatattgagaaactacatcctgctgggcagcctgaagctctc
tacttgcatgctgccgtaacccaaggttttggaaaggtacataggctccaagcagctgac
ttgtgtctagctgtccagattgggaacatggctagtgggggcagtgatgaaagtaacttt
acaaaaaatgttattggattttattattttaaaaaagaaatagagatgagattgtgcctg
gaattggtgggttcttggtctgacttcaagaatgaagccacggaccctcgtggtggagct
gcctgccagtcccgcgccgtgcacccgcactcctcagcccttgggtggtcgatgggactg
ggcgccatggagcagggggtggcgctcgctggggaggcttgggctgcacaggagcccatg
gagggggtgggaggctcaggcatggcgggctgcaggtcccgagccctgccccgcgggaag
gcagctaaggcccggcgcgctgagagggctggcgccgcggcggtagcggtggcggtcgcg
gctgtggccgggggaagtgaatggttttacccagagggccctgcgccgcctttctccgct
ggcaacggcgccgctccccgctcctcctccccagccatggcgttcacgttcgcggccttc
tgctacatgctggcgctgctgctcactgccgcgctcatcttcttcgccatttggcacatt
atagcatttgatgagctgaagactgattacaagaatcctatagaccagtgtaataccctg
aatccccttgtactcccagagtacctcatccacgctttcttctgtgtcatgtttctttgt
gcagcagagtggcttacactgggtctcaatatgcccctcttggcatatcatatttggagg
tatatgagtagaccagtgatgagtggcccaggactctatgaccctacaaccatcatgaat
gcagatattctagcatattgtcagggtgtctcagcttcggcactgttgacgcttctgggc
tgtgtgggaatttctgtgggaagctgtcctgtatatcatgggacgttcagcagcatccct
ggcctttacccactagttgccatgagcaccctcctgccccctcatgacaaccaaaaatgt
ctctggacattgccagatgtcctgaggggcaaaattgccctggaaaacgcccttaagtag

>gi568815584f:54409960_54638380|GENSCAN_predicted_peptide_3|238_aa
MVASGSTGVGLTGKEHKKIDGNVQYLDRGLSCIDDVFDNTWKMRQAGSHYPQQTNARTEN
QTLHILTLQADMANSGKKQIVKNSEKYQGKNHDRKHMNSRDGIMGETKLSKTPQCGTTPR
CPSDTDQTVMQGSDAEKVGVLGTRGHRIPDVLRPAALRLRCPLLLVATPLWRYPPLRLSP
LGHLPSQYQAGGHDEAGKDHRDVEKRRVFIKRYQKHRSHQGLALGRARLQPRSPAQPG

>gi568815584f:54409960_54638380|GENSCAN_predicted_CDS_3|717_bp
atggttgcttccggaagtacaggagtaggactgactgggaaagagcataagaaaattgac
ggtaacgttcagtatcttgacagaggcttaagctgtatagatgatgtgtttgataacact
tggaaaatgcgtcaagctggaagccattatcctcagcaaactaatgcaagaacagaaaat
caaacattgcatattctcactttgcaggcagacatggcaaacagtggaaagaagcaaata
gtgaaaaactcagagaagtaccaagggaaaaaccatgacagaaaacacatgaacagtaga
gatggtattatgggagaaacaaagctgagtaaaacaccccaatgcggtaccaccccaaga
tgccccagcgacacggaccaaacggtgatgcagggcagtgacgcagagaaagtcggagtt
ctaggcacccggggacaccgaatccccgacgtcctccggcccgcggccctccggctccgg
tgccccctgctgctcgtcgcgaccccactctggcggtatccgccccttcgtctctcaccc
ctgggacacttaccatcccaataccaggccggtggtcacgatgaagcaggtaaagaccac
cgcgatgtagaaaagcggcgagtattcataaagcgttaccagaaacaccgcagccatcag
ggtcttgctctgggtagagcccggctccagccgcggagcccagcccagcccggctga

>gi568815584f:54409960_54638380|GENSCAN_predicted_peptide_4|197_aa
MTKTRPFLSSQCISAKEYYTLQFALLQFAPPAWQFTFTFSKSIKKDSKEEIYCQLPRDTK
IEDFGTVPRSRYPLVALLTLADEDDREIYDIQLFMSANNNFTPSNNSSSEEKNTDRSLLE
KVGLSESEVEPSEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQQCPMCRQFVQES
FALCSQKEQDKDKPKTL

>gi568815584f:54409960_54638380|GENSCAN_predicted_CDS_4|594_bp
atgaccaaaaccaggccctttttatctagtcagtgtatcagtgccaaggagtactacacg
ttacagtttgcgctgctacagtttgcacccccagcatggcaatttacctttacattttca
aaaagtattaaaaaggatagcaaagaagaaatatattgccagttaccaagagatactaaa
attgaagactttggtacagtacccagatctcgctatccattggtagcgctattgacctta
gctgatgaggatgaccgggaaatttatgatattcaacttttcatgtctgcaaataataat
ttcactccctccaacaattcctcttcagaagaaaaaaacacagacagaagtttgttggaa
aaggtgggactctctgaaagtgaagttgagccatcggaagagaacagcaaggactgtgtt
gtttgccagaatgggactgtgaactgggtactcttaccatgcagacacacatgcctgtgt
gatggctgtgtgaagtattttcagcagtgcccaatgtgcaggcagtttgttcaggaatct
tttgcactttgcagtcaaaaagagcaagataaagacaaaccgaagactctttga

>gi568815584f:54409960_54638380|GENSCAN_predicted_peptide_5|585_aa
MTRIPTFTTSIQHSTGSPSWSNQTRERHQGIKISKEEVKLSLFADDMIVYLENPKDSSKK
LLELVNEFSKVSRYKINVHRSVVLLYTNSNQAENQIENSTPFTIAANKIKCLGIYLTKDM
KDPYKENYKTLLKEIIDDANKWKHIPFSWIAAMSYLQSSPTPAHARHSILNPNLNTEMQC
AKNEVSLAHNYNSKGNCMREKSIIHATVATTRKGLTEFTVGKIPKRPAEGLASAWPEAEK
RREERGLGRRDGGGGRRTLTGAVGLAFEDVQLGAVGQRVLQAELEEAGLGLAHALEQRQQ
RNSLLALVPALKPARQHPDLVAKHHVWRSRSPAAGDAFLFQGGSGARTLQLWDGDFRRPG
VSSPLGGNSDPSRPHSRAAITTGRRERAAVRPRLAEERALGGRGHQRVLGPGEGASRGRL
GSPKSSRPLRPLRTRCGRWAIPHRVTARSLLPREAAERLQLHLQQQPASPPPGAPLDLGR
RGRHSAGHTPREGTAGVRSAAPFGQRGGPAGNADRRRRHTPPNDSKESSAAGVPPVPSRF
SWPPPAGRRTQRLSLQGAASFQQHAASGSQNFSGGGGSPRGGDPQ

>gi568815584f:54409960_54638380|GENSCAN_predicted_CDS_5|1758_bp
atgacgaggatacccactttcaccacttctattcaacatagtactggaagtcccagctgg
agcaatcaaacaagagaaagacatcagggcatcaaaatcagtaaagaggaagtcaaactg
tcactgtttgctgatgatatgattgtatacctagaaaaccctaaagactcatccaaaaag
ctcctagaactagtaaatgaattcagcaaagtttcaagatacaaaattaatgtacacaga
tcagtagttctgctatacaccaacagcaatcaagctgagaatcaaatcgagaactcaacc
cctttcacaatagctgcaaacaaaataaaatgcttaggaatatacctaaccaaggacatg
aaagatccctataaggaaaactacaaaacactgctgaaagaaatcatagatgatgcaaac
aaatggaaacacatcccattctcatggatagctgctatgtcttatctgcaaagctctcct
actcctgcacatgcaagacactccatcctcaacccaaacctcaacactgaaatgcagtgt
gccaaaaatgaagtcagtctggcacataattataattccaaaggaaactgcatgagagaa
aaatcaatcattcatgctaccgtagctaccacacggaaagggctgacggagttcacagtg
ggcaaaatcccaaagcggccggcggagggactggcctcggcctggcccgaggcagagaag
cggagggaggagcgggggttgggcaggcgggacggcggcggcggccgccgcacacttacc
ggggctgttggcctcgcgttcgaggacgtgcagctcggcgcagtcggccagcgagtgctc
caggcagagctggaggaagcgggcctgggtctggctcacgcgcttgagcagcgacagcag
cgcaacagtctgctcgcactcgttccagcccttaaaccagcccgccagcaccccgacctg
gtcgcgaaacatcatgtttggcggagccgcagccccgcggccggagacgcgttcctgttc
caaggtggctctggtgcccggacgctgcagctttgggatggtgatttccggcgtcctggg
gtctcctccccgctgggcggcaactcggacccttcacgcccgcattcccgagcggcgatc
accactggaaggagagaaagagctgcagtgagacctcggctagcggaggagcgcgccctg
gggggacgagggcatcagagggtgctggggccaggggagggggcgtcccgcggaaggttg
ggttcgccgaaatccagccgccccctccgccccctccgcacccgatgtgggagatgggct
attccccaccgggtaacagcgagaagcctgcttcccagagaagcagccgagcggctgcag
ctccatctacagcaacagccagcatctccaccgccaggcgcccctctggatttaggccgc
cgagggcggcacagcgctgggcacacgccccgcgaggggacggccggggtccgcagcgct
gctcccttcggccagcggggcggccccgcggggaatgcggatcggcgccgcaggcacacg
ccccccaacgacagcaaagaaagttcggctgcgggggttcccccagtcccatcccggttc
tcgtggccgccgccggcggggaggagaacccagcgactcagccttcaaggagccgctagc
ttccaacaacacgctgcttccggctcccagaacttctcgggcggagggggaagcccccgg
ggaggggacccccagtga

>gi568815584f:54409960_54638380|GENSCAN_predicted_peptide_6|245_aa
MVFSAPFGGKIFTGLCPGSWLVRRWSLESRVQPASGDSQGVDSPELGLPLDSEHEALAER
GIKERQEFSAFKVISGLHSLTERFILLNEQHSGHQWPSEWAEIPWAAPDPSKPLNQPLHK
NRSLEKAFEETLPYASLFPSIVASGISKAWGVLLLKGCLCISSTGGITWEVLDTQILRPH
PSPAESEPAFQQEPQRGLHQGRELNNGMDEEYLLQQYNSASDEIADALKVKHETIGEAAM
EIGLQ

>gi568815584f:54409960_54638380|GENSCAN_predicted_CDS_6|738_bp
atggtcttcagtgctccctttggagggaagatcttcactgggctgtgtcctggctcttgg
ttggtgaggaggtggagtttggagagcagggtgcagcctgccagtggagattctcaggga
gtggactcaccagagctgggattaccactggactcggaacatgaggccttggccgaacgt
ggcataaaggagagacaggagttcagtgctttcaaggttatcagtggccttcacagcttg
acagagcgcttcattctgctgaatgagcaacactcaggacaccagtggccttccgagtgg
gcagaaattccttgggcagctccagatcccagcaaaccacttaatcagcctttacataaa
aatcgtagcctagagaaggcatttgaggaaactcttccttatgctagccttttcccctcc
attgtggcctctggaatcagtaaggcgtggggagttttgctcctcaaagggtgtctgtgc
atcagcagcactggtggcatcacctgggaggtgttagatacacagattctcaggccccac
cctagccctgctgaatcagaacctgcatttcaacaagaaccccagaggggtctgcaccaa
ggaagggaattgaataatggcatggatgaagaatatttactgcagcagtataactctgca
tcagatgaaattgctgatgctctgaaagtcaagcatgagactattggggaagcagctatg
gaaataggccttcagtag

>gi568815584f:54409960_54638380|GENSCAN_predicted_peptide_7|86_aa
MVLDSHRSADPIVNCACKGSRLHTPYDQPPSLSPLPWPVETLSSMKPVPGAKKQNQQAPP
PPSPLPPRHQAPHSLTWLTGMALAPN

>gi568815584f:54409960_54638380|GENSCAN_predicted_CDS_7|261_bp
atggtattagattctcatagaagcgcagaccctattgtgaactgtgcatgcaagggatct
aggttgcacactccttatgaccaacccccatccctgtccccactaccctggcccgtggaa
actttgtcttccatgaaaccagtccctggtgccaaaaagcaaaaccagcaggctccacct
cctccatccccactaccccctaggcaccaggcaccccactctctgacatggctgactggc
atggcattagctcctaactaa