GENSCAN 1.0	Date run:  6-Nov-116	Time: 14:27:18

Sequence gi568815584r:50230077_50495871 : 265795 bp : 40.06% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    887   1183  297  1  0   74   71   132 0.784   7.37
 1.02 Intr +   1419   1596  178  2  1   78   89    60 0.746   3.67
 1.03 Term +   2397   2554  158  1  2    7   43   150 0.584  -0.49
 1.04 PlyA +   2907   2912    6                               1.05

 2.11 PlyA -   5210   5205    6                               1.05
 2.10 Term -  17177  16982  196  1  1  122   36   236 0.917  17.70
 2.09 Intr -  35413  35282  132  0  0  105   82    60 0.730   5.94
 2.08 Intr -  37834  37677  158  1  2   72   60    98 0.764   3.29
 2.07 Intr -  39254  39087  168  2  0   77   94   116 0.890  10.32
 2.06 Intr -  48478  48444   35  2  2  122   98     9 0.866   2.32
 2.05 Intr -  53957  53795  163  2  1   78  103   180 0.953  17.13
 2.04 Intr -  64170  64039  132  0  0   58  110    79 0.990   7.02
 2.03 Intr -  72092  71941  152  0  2  100   86   110 0.997  10.96
 2.02 Intr -  72941  72826  116  1  2   19   77   137 0.927   4.87
 2.01 Init -  82074  81935  140  0  2   51  109    58 0.750   2.63
 2.00 Prom -  82780  82741   40                              -3.45

 3.00 Prom +  87112  87151   40                              -2.85
 3.01 Init +  89158  89225   68  0  2   66   30    83 0.483   0.90
 3.02 Intr +  92435  92643  209  2  2   84   28   218 0.602  13.20
 3.03 Intr +  93869  94040  172  0  1   89   71   102 0.490   6.68
 3.04 Intr +  95533  95569   37  1  1  100   46    -8 0.010  -6.45
 3.05 Intr + 101946 102160  215  2  2   70   91   174 0.078  12.49
 3.06 Term + 105383 105482  100  2  1   84   41   135 0.560   5.02
 3.07 PlyA + 105846 105851    6                              -0.45

 4.34 PlyA - 105875 105870    6                              -3.74
 4.33 Term - 106144 105917  228  1  0   39   48   177 0.781   4.45
 4.32 Intr - 108953 108871   83  0  2   87  101    84 0.935   8.04
 4.31 Intr - 111156 110956  201  1  0   36  106   360 0.704  30.94
 4.30 Intr - 112146 112056   91  0  1   56   61    52 0.166  -2.05
 4.29 Intr - 112982 112830  153  2  0   28   72    94 0.056   1.15
 4.28 Intr - 128068 127948  121  0  1   38   76    64 0.164  -0.22
 4.27 Intr - 129073 128952  122  1  2   91   96    75 0.505   6.97
 4.26 Intr - 132318 132110  209  1  2   37   52   124 0.593   1.57
 4.25 Intr - 132961 132814  148  1  1   58   73   163 0.965  10.69
 4.24 Intr - 146343 146261   83  1  2  111   57     2 0.060  -2.16
 4.23 Intr - 147653 147465  189  0  0   71   81   155 0.895  11.74
 4.22 Intr - 148356 148101  256  0  1   88  103   102 0.633   7.79
 4.21 Intr - 150156 150029  128  1  2   47   63    64 0.319  -0.72
 4.20 Intr - 160108 160053   56  0  2   81   91    32 0.683   0.50
 4.19 Intr - 160376 160201  176  2  2   -5   36   192 0.116   2.52
 4.18 Intr - 165848 165625  224  0  2    6   86   276 0.772  16.12
 4.17 Intr - 167205 166982  224  2  2   64   37   231 0.648  12.45
 4.16 Intr - 167560 167510   51  0  0   91   37   139 0.567   6.20
 4.15 Intr - 180572 180370  203  2  2   29   49   239 0.002  11.26
 4.14 Intr - 195901 195831   71  2  2   74   99    39 0.896   1.58
 4.13 Intr - 198678 198586   93  1  0   80   97    87 0.992   7.82
 4.12 Intr - 199184 199116   69  0  0   68   98    46 0.781   1.84
 4.11 Intr - 204495 204318  178  0  1   95  111   117 0.998  13.27
 4.10 Intr - 204989 204886  104  0  2   93   71    74 0.939   5.17
 4.09 Intr - 213960 213859  102  1  0   65   43    97 0.598   2.13
 4.08 Intr - 215118 214965  154  0  1   46   52   113 0.542   2.22
 4.07 Intr - 216045 216003   43  2  1   67  105     7 0.711  -2.38
 4.06 Intr - 217405 217338   68  1  2  106  108    59 0.847   6.48
 4.05 Intr - 224174 224115   60  2  0   97   99    11 0.434   1.11
 4.04 Intr - 232705 232589  117  1  0   93   94   126 0.979  13.44
 4.03 Intr - 237123 237102   22  2  1   58   94    27 0.336  -3.07
 4.02 Intr - 238706 238575  132  1  0   67   20   138 0.014   3.74
 4.01 Intr - 245073 245001   73  1  1   89   99    52 0.014   3.95

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 133165 133145   21  1  0   60  101    13 0.832  -0.81
S.002 Term + 137322 137499  178  0  1   81   47   163 0.867   7.68


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:50230077_50495871|GENSCAN_predicted_peptide_1|210_aa
MKSSFMIITKPSFRDQAKKKNLRNVLQNATGNCEPPIASQRETARPRGLEPCGRDDLLPV
RSSGGHGPPAGRPAPSTDLPQGRDQQSPPFRTVLLAEELRPQRKRGDPQARATPGGDLLS
RRRWPASGAAPPPLSGFAARQGYSWPSPAPTPATAAAGGPSLARAPVRSQNHIVFTKLSR
YFRIVFLIVSSKLCRLQVLQNLDRRLGNTH

>gi568815584r:50230077_50495871|GENSCAN_predicted_CDS_1|633_bp
atgaaatccagttttatgatcataacaaaaccttccttccgggaccaggcaaaaaaaaaa
aacttgagaaacgtccttcagaatgcaacaggcaattgtgagccccccattgccagccaa
cgagaaacggctcggccccggggactcgagccctgtgggagggacgacctgctccccgtt
agaagctcggggggccacgggccacccgccggccgccccgcccctagcactgaccttccg
cagggccgagaccaacagtccccgccatttcggactgttctcctcgctgaagaactccgc
ccgcagaggaagcgcggcgacccgcaagcccgggcgaccccgggcggcgacctcctttcc
cggcggcgctggcccgcttctggggcggctcctcctcctttgtctgggttcgcggcccgt
caggggtacagctggcccagccccgccccgactcccgctacggccgcggcgggcggtcct
tcacttgcacgggcccctgtgcgttcacaaaatcatatcgtttttacaaaactttcaaga
tattttcgaattgttttcttaatcgtgtcatccaaattgtgtaggcttcaggtcctacaa
aacctggatcggcgtctaggaaacactcattag

>gi568815584r:50230077_50495871|GENSCAN_predicted_peptide_2|463_aa
MVPALRYLVGACGRARGLFAGGSPGACGFASGRPRPLCGGSRSASTSSFDIVIVGGGIVG
LASARALILRHPSLSIGVLEKEKDLAVHQTGHNSGVIHSGIYYKPESLKAKLCVQGAALL
YEYCQQKGISYKQCGKLIVAVEQEEIPRLQALYEKGLQNGVPGLRLIQQEDIKKKEPYCR
GLMAIDCPHTGIVDYRQVALSFAQDFQEAGGSVLTNFEVKGIEMAKESPSRSIDGMQYPI
VIKNTKGEEIRCQYVVTCAGLYSDRISELSGCTPDPRIVPFRGDYLLLKPEKCYLVKGNI
YPVPDSRFPFLGVHFTPRMDGSIWLGPNAVLAFKREGYRPFDFSATDVMDIIINSGLIKL
ASQNFSYGVTEMYKACFLGATVKYLQKFIPEITISDILRGPAGVRAQALDRDGNLVEDFV
FDAGVGDIGNRILHVRNAPSPAATSSIAISGMIADEVQQRFEL

>gi568815584r:50230077_50495871|GENSCAN_predicted_CDS_2|1392_bp
atggtgccagcgctgcgttatttggttggtgcctgcggacgggcccgcgggcttttcgcc
ggtggctcccctggggcgtgcgggttcgcgtctgggaggccaagaccgctgtgtggaggt
agccgcagcgccagcaccagctcatttgatatagtcatcgttggtggcggaattgtgggg
cttgcctctgccagagcactcatcctgcgacatccatcactttctattggtgttctggaa
aaggagaaagatttagctgttcaccagactggacataacagtggtgtcatacatagtgga
atttattataaacctgagtctctgaaagccaaattatgtgtacaaggtgcagccctcctc
tatgagtactgtcagcaaaagggaatttcctacaagcagtgtggcaagcttatagtagct
gttgaacaagaagaaattcccagacttcaggccctatatgagaaaggcctccagaatggt
gtcccgggcctgaggctgatccagcaggaggatataaaaaagaaggagccatattgtagg
ggtctaatggctattgattgtccacatactggcattgtggactatcggcaggtggctttg
tcatttgcccaggatttccaagaagcaggtggctctgtcttgaccaattttgaagtaaaa
ggtattgaaatggctaaagaaagtccttcaagaagtatagatggaatgcaatatccaatt
gttataaagaatacaaagggagaggaaattcgatgtcagtatgttgtgacatgtgcagga
ctttactcagaccgtatttcagagttgagtggctgcactcctgatcctcgaattgtacca
ttccggggagattacctgcttttgaagccagaaaaatgttatcttgtaaaaggaaatatt
tatccggtcccagatagccggtttcctttcctaggagttcacttcacaccaaggatggat
ggcagtatttggctagggcctaatgcagttcttgcctttaaacgagagggttacagaccc
tttgacttcagtgccacagatgttatggatataattatcaatagtggcttgattaaactg
gcatcccagaatttttcctatggagttactgaaatgtataaagcatgttttcttggtgca
acagtgaagtatcttcaaaaattcatccctgaaattactatcagtgatatacttaggggc
ccagctggagtaagagcccaggccctggatagagatggaaatctggtagaagattttgta
tttgatgcaggagttggggatattggaaatcgcattcttcatgtgagaaatgcaccttct
cctgctgctacttcttccattgcaatttctggaatgattgcagatgaagtacaacaaaga
tttgaattataa

>gi568815584r:50230077_50495871|GENSCAN_predicted_peptide_3|266_aa
MIRGSGAEACSNEDGCSEKGMKGVDYDRIRDVGPDRAASEWLLRCGAMVRYHGQERWQKD
YNHLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLEHVEKIRLCKCHYIEDDCLLRLSQL
ENLQKTILEMEIISCGNITDKGIIALRHLRNLKYLLLSDLPGAGNPGPCVASGSSRTRAP
LGFRERGLQETDVPGALVDRSYDLSPSAGMRMLELKATTAILKSRFQLSVPGGSLLFKQS
PVGHSSISFWPYKAILRQSRAGDNQE

>gi568815584r:50230077_50495871|GENSCAN_predicted_CDS_3|801_bp
atgataagaggtagtggagcagaggcttgcagtaatgaagacggctgtagtgaaaaaggg
atgaaaggggtggattatgatcgcatcagggatgttggccctgacagggcggcatccgag
tggttgctgcgctgtggggccatggtgcgctaccatggccaggagaggtggcagaaggac
tacaaccaccttccaacaggccctctggacaaatacaagattcaggcgatcgacgccacc
gactcttgtatcatgagcattggatttgatcacatggagggcctagagcatgttgaaaaa
ataaggctgtgcaagtgtcattatatcgaggatgactgtttgctgagacttagtcaactt
gaaaatttacaaaaaaccatattggaaatggaaataatatcctgtgggaatatcacagac
aaaggcatcattgctttgcgtcatttaagaaacctcaaatatttgttgttaagtgatctt
cctggagctggaaaccctggcccctgtgtggcatcaggaagcagcaggacaagggcacct
ttaggattcagggagagggggcttcaggagacagatgtccctggggccctggttgataga
tcctatgacctgtctcctagtgctggaatgaggatgctggagctgaaagccacaactgcc
atcctcaagtctagattccaactctctgtaccaggtggcagcctgctgtttaaacagtct
cctgtggggcattcgtcaatctccttttggccgtataaggcgattttgcgccagtcacgt
gctggagacaatcaggaataa

>gi568815584r:50230077_50495871|GENSCAN_predicted_peptide_4|1410_aa
XDFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELGELQP
PMFDLHPMSPQENGSHHTFVAQPGLSRALAVELLDKVNNPDNHAHYTEADDDDFEANYYS
DLCHINWLLPDLDLQGLSSDPNFMLQWNPFVDGANTGKSTSKRAIPPPLPPKPRISSYPE
DNFPDEEKASTIKHCPDSESRAPQILRRQSSPSCGPVAETSSIGNGDGISKLMSENTEGS
AQAPQLPRKKDKRDFPVVRNPYTGHKYLCGALQSGIVLLQWYEPMQKFMLIKHFDFPLPS
PLNVFEMLVIPEQEYPMVCVAISKGTESNQVVQFETINLNSASSWFTEIGAGSQQLDSIH
VTQLERDTVLVCLDKFVKIVNLQGKLKSSKKLASELSFDFRIESVVCLQDSVLAFWKHGM
QGKSFKSDESNFPPCDSRVSKEEAQLPFPTPSSYGADSSNQTYAHKSQSEREQHKEVRAV
LNHCSGLDGGEESGLCGTSTRIDAGTGNGTDDKVTDQHRHRRCLQGTKGNNRGSEVWGLL
LQGNVDRSGGAPSAGVLLRRRGYSCALHGLRKFANLAGLLSRQQDSARGVSHHSRLKIHF
KKIYSSMMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIR
MLKAPSPYAAEPSLCGMKMVRRGKKEFLPAVAEKVDAPSGVGGQGQDSVTVGSLGRRSTY
GRKQEKQVRQREGIIYCYVAVLLRIYYFDQGCVAREEEQFQELVFGPFCHIGSYFTGHRT
NVRPYILLLSRPSPFKTAAGTYEAGLVILECSYFLAEQEPYCPTQALQQPHPIIGPWALE
GGGVESKEDRHPPPKEAPASCEGFLRSAVPKQAYTPFKTSPDKRLSDCVATPPWAPPTPL
IISSGVLVAICSMIDPVPEFHSEGLLAKATSGSAGILVWIFLCNDAFIYGKYILRSGVLW
VRGLPGFKSEAAALCHKCYSSADPKREQQQDLLQRVKEQSFHSVNGAQARHKGSPSPHQT
QEPSWPHPVDPTPGHRWSCLPVPCRAPALLSPWVVDGTGCCGAGGGSDRGGSAAQEPTQL
KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGICNIFVCTGRRLGEHTEALSK
KKKKGGGGPFLKLRAASCRITLFKNVGCGLETTGDLSLNSGGGAASRGVAAALRALVCGT
ELTSSDSPQRCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPE
LLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFST
NQYFSGVKIPDPEDMSLCLSVTLTEGGLLASGAVKRSQMGSSVSQATSWPHPDIVAETAE
LDDIAMARQTPVMLRFNRQKEQEKYLSYGA

>gi568815584r:50230077_50495871|GENSCAN_predicted_CDS_4|4233_bp
nctgactttggtgtggctgcaaaaataacagctaccattgcaaaacgaaaatctttcatt
ggcaccccttactggatggccccagaagttgcagcagtagagaagaatggtggctacaac
caactctgtgatatctgggcagtaggaataacagcaattgaacttggagaacttcagcca
cctatgtttgatctccacccaatgagcccacaagaaaatgggtcacaccacacttttgtt
gcacagccaggtctctctagagccctagcagttgaactgttagacaaagtgaacaatcca
gataaccacgcacattacactgaagcagatgacgatgactttgaggcgaattactattct
gatctctgtcacataaactggcttttacctgatcttgaccttcagggattgtcatcagac
ccaaatttcatgttacagtggaatccttttgttgatggtgcaaatactggcaaatcaacc
tcaaaacgtgcaataccacctcccctacctcctaagccaaggataagcagttaccctgaa
gacaactttccggatgaagaaaaagcatcaaccataaaacattgtcctgattcagaaagc
agagctccccaaattctcagaagacagagtagcccaagttgtgggcctgtggcagagact
tcttctattggaaatggtgatggtatttcaaaactgatgagtgaaaatacagaaggatca
gcacaagcaccacagttaccacgaaaaaaggacaaacgagacttccctgtagtcagaaac
ccttacacgggacataaatacctctgtggagctttacagtctggaattgttttacttcag
tggtatgagccaatgcagaaattcatgttgataaagcactttgattttcctttgccaagt
cctttgaatgtttttgaaatgctggtgatacctgaacaggaataccctatggtctgtgta
gctattagcaaaggcactgaatcgaatcaggtagttcagtttgagacaatcaatttgaac
tctgcatcttcatggtttacagaaattggtgcaggcagccagcagttagattccattcat
gtaacacagttggagagagataccgttttagtgtgtttagacaaatttgtgaaaattgta
aatctacaaggaaaattaaaatcaagtaagaaactggcctctgagttaagttttgatttt
cgcattgaatctgtagtatgccttcaagacagtgtgttggctttctggaaacatgggatg
cagggtaaaagcttcaagtcagatgagagtaatttcccgccttgtgactctcgtgtctcc
aaagaagaagcccaactccctttcccaacacctagcagctacggtgcagactcctccaac
cagacttacgcacacaagtctcagtctgaaagagagcagcacaaggaagtacgtgctgtc
ctgaaccattgttctggcttggatggtggagaggagtctggcctttgtgggacaagtacc
cgcattgatgctggcactgggaacgggacggatgataaagtcactgatcagcacagacac
agaagatgcctccaagggaccaaagggaataaccgcggttctgaggtgtggggactgctg
ttgcagggaaatgtggaccgctcaggaggggctcctagcgcaggcgtcttgctccgcaga
cgcggttacagctgcgctttgcacggcctgcggaagtttgcaaatctagcaggtctgctc
tcccggcagcaggactcggcccgcggcgtgagccaccattctcggctgaagatccatttt
aagaagatttattcctctatgatggagaagtatgaaaaaattgggaaaattggagaagga
tcctatggagttgttttcaaatgtagaaacagggacacgggtcagattgtggccatcaag
aagtttctggaatcagaagatgaccctgtcataaagaaaattgcccttcgggaaatccga
atgctcaaggccccaagcccctatgctgctgaaccttctctctgtggaatgaaaatggta
agaagaggaaagaaagaatttctgccagcagtggcagaaaaagtagatgctcctagcgga
gttggaggtcaaggacaggacagtgtcactgtgggatccctgggcagacgttctacctat
ggcagaaaacaagaaaaacaagtgagacaaagagaaggaatcatctactgctatgtggca
gttttgcttcggatttactattttgaccagggttgtgttgccagggaggaagagcagttt
caggagcttgtgtttggccctttctgccatattggctcttacttcacaggtcatagaacc
aatgtgaggccttacattttactactatcacggcccagccccttcaagacggctgctggt
acctatgaggcaggtcttgtcattcttgagtgcagttatttcctcgcagagcaagaacct
tattgccctactcaggcactgcaacaacctcatcctattataggtccgtgggccctagaa
ggaggtggggtagaatctaaggaggacaggcatccccctcctaaggaggcacctgcatca
tgtgagggatttttaaggtctgcagtgccgaagcaagcttacaccccattcaaaaccagc
cctgacaaaaggcttagtgactgtgttgctacacctccctgggctcctcccaccccactt
atcatcagcagtggggtccttgttgccatctgctccatgattgatccagttccagaattc
cattctgaaggcctgctagctaaggccacttcaggaagtgctggaatcctggtatggata
tttttatgcaatgatgcttttatttatggaaagtatattctcagaagtggagtgctatgg
gttcgtggtctccctggcttcaagagtgaagctgcagccctttgccataagtgttacagc
agtgcggacccaaagcgtgagcagcagcaagatttattgcaaagagtgaaagaacaaagc
ttccacagtgtgaatggtgcccaggctagacataaaggttctccaagtccccaccagact
caggagcccagctggcctcacccagtggatcccacaccaggccacaggtggagctgcctg
ccagtcccatgccgtgcgcccgcactcctcagtccttgggtggtcgatgggaccgggtgc
tgcggagcagggggcggttctgatcgtggaggctcggccgcgcaggagcccacgcaactc
aagcatcccaaccttgttaacctcctggaagtcttcaggaggaaacggaggcttcacctg
gtgtttgaatattgtgaccacacagttctccatgagttggacagataccaaagaggcata
tgcaacatctttgtgtgcactggaagaagacttggtgagcacacagaggccttgtccaag
aaaaagaaaaaaggaggagggggtcccttcctgaagttgagggcagcctcttgcaggatc
accctgtttaagaatgttggctgtgggctggaaaccacaggtgatttgagtctaaattct
ggagggggggccgcatctcgaggggtggctgcagctctcagagcacttgtgtgtgggaca
gagctgacatctagcgactctccccagaggtgcatacatagagacgtgaagccagaaaat
atcctcatcacgaaacattccgtgattaagctttgtgactttggatttgctcggcttttg
actggaccgagtgactactatacagactacgtggctaccaggtggtaccgctcccctgag
ctgctggtgggggacacgcagtacggccccccggtggatgtttgggcaattggctgtgtc
tttgctgagctgctgtcaggagtgcctctgtggccaggaaaatcggatgtggatcagctg
tatctgattaggaagaccttgggggatctcattcctaggcaccagcaagtgtttagcacg
aatcagtacttcagtggagtgaaaattccagaccctgaagatatgtccctctgcctgtca
gtaaccctgacagagggaggcctgcttgcttctggggctgtgaaacgctcacagatgggc
tccagcgtatcacaggcaaccagttggcctcatccagacattgttgctgagacagcagag
ctcgatgatatagcaatggcacgtcaaaccccagtgatgctcagattcaaccgacagaaa
gaacaagagaaatatttaagctatggagcatga