GENSCAN 1.0	Date run:  8-Nov-116	Time: 05:25:40

Sequence gi568815584f:34896710_35129149 : 232440 bp : 41.72% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   8788   8844   57  0  0  111   64    34 0.191   2.66
 1.02 Term +  23954  24298  345  1  0   43   48   309 0.497  15.91
 1.03 PlyA +  25061  25066    6                               1.05

 2.00 Prom +  27069  27108   40                              -4.85
 2.01 Init +  42616  42797  182  0  2   91 -128   339 0.308  11.31
 2.02 Intr +  42972  43202  231  0  0   70   51   219 0.575  12.37
 2.03 Term +  43218  43626  409  0  1  -31   39   450 0.981  21.90
 2.04 PlyA +  43760  43765    6                               1.05

 3.00 Prom +  64365  64404   40                              -1.95
 3.01 Init +  65537  65619   83  1  2   66   57    80 0.319   3.19
 3.02 Intr +  85219  85293   75  1  0   74   98    94 0.272   6.71
 3.03 Intr +  85701  85906  206  0  2   62   30   200 0.700   9.52
 3.04 Intr +  86421  86506   86  1  2   73  115    60 0.761   5.82
 3.05 Intr + 102849 102940   92  2  2  114   97    95 0.894  10.87
 3.06 Intr + 114800 114950  151  2  1   50   92   166 0.825  12.44
 3.07 Intr + 116637 116785  149  2  2   44   85   139 0.803   7.31
 3.08 Intr + 117093 117193  101  0  2  108   76    46 0.963   4.23
 3.09 Intr + 118035 118121   87  1  0  113   31   113 0.724   7.12
 3.10 Intr + 122282 122365   84  0  0   26  116    53 0.250   0.77
 3.11 Intr + 126201 126371  171  1  0   44  116   134 0.944  10.79
 3.12 Intr + 137489 137634  146  0  2   90   22    88 0.001   1.48
 3.13 Intr + 149299 149421  123  0  0   27   86   105 0.008   4.06
 3.14 Intr + 149719 149919  201  0  0   37   96   206 0.008  14.86
 3.15 Intr + 156569 156742  174  1  0   28   94   186 0.039  12.41
 3.16 Intr + 165107 165197   91  1  1   46   39   106 0.021   0.15
 3.17 Intr + 182218 182315   98  2  2   70   69   161 0.997  11.21
 3.18 Term + 184313 184519  207  1  0   92   38   248 0.977  16.56
 3.19 PlyA + 184996 185001    6                               1.05

 4.08 PlyA - 185203 185198    6                               1.05
 4.07 Term - 189069 188881  189  0  0  112   39   203 0.997  14.27
 4.06 Intr - 194498 194361  138  2  0  104  110    44 0.992   7.94
 4.05 Intr - 198475 198339  137  2  2   82   22   119 0.959   4.07
 4.04 Intr - 202675 202543  133  1  1  109   98    16 0.524   4.00
 4.03 Intr - 213920 213816  105  2  0   40  110    83 0.908   5.19
 4.02 Intr - 220028 219901  128  0  2   72  110    46 0.609   4.68
 4.01 Init - 220241 220205   37  2  1   57   34    53 0.182  -2.98
 4.00 Prom - 223125 223086   40                              -6.75

 5.00 Prom + 224826 224865   40                              -7.55
 5.01 Init + 225481 225573   93  0  0   59   13   105 0.080   0.53
 5.02 Intr + 225774 225926  153  2  0   66   84   102 0.095   6.95
 5.03 Intr + 225988 226058   71  0  2   44   72    86 0.050  -0.34
 5.04 Intr + 226102 226201  100  1  1   56   94    84 0.093   4.99
 5.05 Intr + 226243 226400  158  0  2  100   56    65 0.068   2.39
 5.06 Intr + 226566 227522  957  0  0   32   76   393 0.066  21.75
 5.07 Intr + 230770 230902  133  1  1   32  109   154 0.976  11.63

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100001 100078   78  1  0   85   87    58 0.948   6.51
S.002 Term - 143154 143060   95  1  2   85   49    80 0.864   0.81
S.003 Intr - 149908 149771  138  2  0   71  119   228 0.916  23.71


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:34896710_35129149|GENSCAN_predicted_peptide_1|133_aa
MDGQARWLTPVIPALWEAEVFIEHMLYALNILRTVLGRARTLSLNHRCRLLLLSLLVLHC
VRSVRSWYLFCEAAAEKTLAFAMAEEKPKALSMGQIRFRFDSQPINETDTPVQVEMEDID
IIDVFHQQIGGVY

>gi568815584f:34896710_35129149|GENSCAN_predicted_CDS_1|402_bp
atggatggccaggcgcgatggctcacacctgtaatcccagcactttgggaggccgaggta
tttattgagcatatgttgtatgccctcaacattttaagaactgtacttggacgtgcacgc
accctgtccctcaaccaccgctgccgcctccttcttctgtcactcctggtgctgcactgt
gttcgttcagtgagaagctggtacctcttttgtgaagcggcagctgagaagactctggca
tttgccatggccgaggaaaagcccaaggcattgtcaatggggcagatcagattccgattt
gacagtcagccaatcaatgaaacagacacacctgtacaggtggaaatggaggatatagat
ataattgatgtgttccaccagcagataggaggtgtctactga

>gi568815584f:34896710_35129149|GENSCAN_predicted_peptide_2|273_aa
MAAEDKLLLPQLPELFETSKQLLDDVEVVTEPAGSRIVQKKVFKGLDLLEKAAEMLSQLD
LWQSLSCRKPRTQLKNHTANFSMAYPSLIAMASQRQAKRERHKQKELEHRLSAIKSAVET
GQADDERVREYYLLHLQSLEEIESIDQEIKILRERDSSREASTSNSSRQERPPVKPFILT
RNMAQVKVFGAGYPSLATMTVSDWYKQHWKYGALPDQGIAKATPEEFRKAAQQQEGQEEK
EEEDDEQTLYRVREWDDWKGIHPRDYGSQQSMG

>gi568815584f:34896710_35129149|GENSCAN_predicted_CDS_2|822_bp
atggctgctgaagacaaattactgctgccacagctccccgagctgtttgaaaccagcaaa
cagcttctggatgatgtagaagtagtgactgaacctgccggttcccggatagtccagaag
aaggtgttcaagggcctggacctccttgagaaggctgccgaaatgttatcgcagcttgac
ttgtggcagagcttgagctgccgaaaaccaagaactcagctgaaaaatcacactgctaat
ttctccatggcttatcctagcctcattgctatggcatctcaaagacaggctaaaagagag
agacacaagcagaaggagttggagcacaggttgtctgcaatcaaatctgctgtggaaact
ggtcaagcagatgatgagcgtgttcgtgaatattatcttcttcaccttcagagcttagaa
gagattgagagcattgaccaggaaataaagatcctgagagaaagagactcttcaagagag
gcatcaacttctaattcatctcgccaggagaggcctccagtgaaacccttcattctcact
cggaacatggcccaagtcaaagtatttggagctggttatccaagtctggcaactatgacg
gtgagtgactggtataagcaacattggaaatatggagcattaccagatcagggaatagcc
aaggcaacaccagaggaattcagaaaagcagctcagcaacaggaaggtcaagaagaaaag
gaggaagaggatgatgaacaaacactctacagagttcgggagtgggatgactggaagggc
atccatcctagggactatggcagccaacagagcatgggctga

>gi568815584f:34896710_35129149|GENSCAN_predicted_peptide_3|774_aa
MRHCTWPKSFYRVADGHRSYKPGKYVDGPFSTEQIHLRDPRRNSHRQAVASEGSGHLHLR
LVRIHCNSAWRSAGATVRSGRSITACLAVGNFTLLEQAAQALAGIAHAQAETAPPSAEQA
SAFLGFFRRRGASLRNSRPLRATALAVSFAVLNAMLKEVCTALLEADVNIKLVKQLRENV
NYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVM
DASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDD
FEPFKTQPFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHDFMSKGNEQESMARLKK
LMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKM
GGIKGLFKGNSPPPGCFHRLVLSVAFPGAQCKQLVDLPFWRLEDGGPFLTAPLSSAPPLK
YNDTAVFILQVQKPRSCGVTAPDAAGDGLRRGRDARLQPGSASDWAGRPRMEVGLPAITL
FLTSASSPVVATTMDQEPVGGVERGEAVAASGAAAAAAFGESAGQMSNERGFENVELGVI
GKKKKVPRRVIHFVSGETMEEYSTDEDEVDGLEKKDVLPTVDPNLPLLPYELGKGDQGPG
VLSGAMLKVEPPFLCDFLGEKIASVLGISTPKYQYAIDEYYRMKKEEEEEEEENRMSEEA
EKQYQQNKLQTDSIVQTDQPETVISSSFVNVNFEMEGDSEVIMESKQNPVSVPP

>gi568815584f:34896710_35129149|GENSCAN_predicted_CDS_3|2325_bp
atgaggcattgcacctggccaaaaagtttttatcgggttgctgatggccacagaagctac
aagccaggaaagtatgtggatggaccattctctacagagcaaattcatctacgagatcca
agacgcaactcccaccgccaggcggtcgcctcagaaggctctggtcacttacacttacgg
ttagttcgcatccactgtaacagcgcctggcggtcggcaggagccacagtgcgaagcggc
cgcagcatcactgcctgcctcgcagtgggaaattttaccttgctggagcaagccgcgcag
gcactggctggcattgcgcatgcgcaagcagagaccgccccaccctccgcggaacaagcc
tccgctttcttgggtttcttccgacggcgtggggcctcgctaaggaattcccggcccctc
agggccacggctttagcggtgtcttttgcggtattgaatgctatgctaaaagaagtctgt
accgctttgttggaagcagatgttaatattaaactagtgaagcaactaagagaaaatgtt
aactatacagaaatggatcctgtcatcattgcttctgaaggagtagagaaatttaaaaat
gaaaattttgaaattattattgttgatacaagtggccgccacaaacaagaagactctttg
tttgaagaaatgcttcaagttgctaatgctatacaacctgataacattgtttatgtgatg
gatgcctccattgggcaggcttgtgaagcccaggctaaggcttttaaagataaagtagat
gtagcctcagtaatagtgacaaaacttgatggccatgcaaaaggaggtggtgcactcagt
gcagtcgctgccacaaaaagtccgattattttcattggtacaggggaacatatagatgac
tttgaacctttcaaaacacagccttttattagcaaacttcttggtatgggcgacattgaa
ggactgatagataaagtcaacgagttgaagttggatgacaatgaagcacttatagagaag
ttgaaacatgattttatgagcaaaggaaatgaacaggagtcaatggcaaggctaaagaaa
ttaatgacaataatggatagtatgaatgatcaagaactagacagtacggatggtgccaaa
gtttttagtaaacaaccaggaagaatccaaagagtagcaagaggatcgggtgtatcaaca
agagatgttcaagaacttttgacacaatataccaagtttgcacagatggtaaaaaagatg
ggaggtatcaaaggacttttcaaagggaacagcccccctcccggctgctttcacaggctg
gtgttgtctgtggcttttccaggtgcacagtgcaagcagttggtggatctaccattctgg
cgtctggaggatggtggcccttttctcacagctccactaagtagtgccccacctttgaag
tacaacgacacagctgtcttcattttacaagtgcaaaaaccgaggtcctgcggggtgact
gccccagacgccgctggtgacgggctgcgccgaggtcgagacgccaggcttcagcctggc
tcggccagcgactgggcggggagaccaaggatggaagtgggcttaccggccattaccctc
tttctcaccagcgccagcagccctgtggtggcgacgacgatggaccaggagccagtgggc
ggtgtggaacgaggagaagccgtcgcagcctcgggagctgcggccgccgcggcattcggg
gaatctgcagggcagatgagtaacgaaagaggctttgaaaatgtagaactgggagtcata
ggaaaaaagaagaaagtcccaaggagagtcatccactttgttagtggtgaaacaatggaa
gaatatagcacagatgaagacgaagttgatggcctggagaagaaagatgttttgcctact
gttgatccgaacttgcctctgctgccttatgaactgggtaaaggcgatcagggccctggt
gttctcagtggtgccatgctcaaggtagagcctccattcttgtgtgacttccttggagag
aagattgcatctgttttgggtatcagcaccccaaagtaccaatatgccattgatgaatat
tatcggatgaagaaggaggaagaagaagaagaagaagaaaacaggatgtctgaagaagca
gaaaaacaatatcaacagaataaattgcagactgattccattgttcagacagatcaacca
gagacagtgatatccagctcatttgtgaatgtcaattttgaaatggagggagacagtgaa
gtaattatggaaagcaagcaaaatccagtctctgtcccaccataa

>gi568815584f:34896710_35129149|GENSCAN_predicted_peptide_4|288_aa
MVEDVEEAASVEEKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFYYRLPAED
EVLLQKLREESRAVFLQRKSRELLDNEELQDLENYILELIPTLPQLDGLEKSFYSFYVCT
AVRKFFFFLDPLRTGQYLNLDKDHNGMLSKEELSRYGTATMTNVFLDRVFQECLTYDGEM
DYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRDEIFDMVKPKDPLK
ISLQDLINSNQGDTVTTILIDLNGFWTYENREALVANDSENSADLDDT

>gi568815584f:34896710_35129149|GENSCAN_predicted_CDS_4|867_bp
atggttgaagatgtagaggaggctgcttcagtagaggaaaaaaaaagtgaacaagaatta
aaagatgaagaaatggatttatttacaaaatattactccgaatggaaaggaggtagaaaa
aacacaaatgaattctataagaccattccccggttttattataggctgcctgctgaagat
gaagtcttactacagaaattaagagaggaatcaagagctgtctttctacaaagaaaaagc
agagaactgttagataatgaagaattacaggatttagaaaactacatattggaacttatc
cctacgttgccacaattagatggtctggaaaaatctttctactccttttatgtttgtaca
gcagttaggaagttcttcttctttttagatcctttaagaacaggccagtacttgaatctt
gataaagatcacaatggcatgctcagtaaagaagaactctcacgctatggaacagctacc
atgaccaatgtcttcttagaccgtgttttccaggagtgtctcacttatgatggagaaatg
gactataagacctacttggactttgtccttgcattagaaaacagaaaggaacctgcagct
ctacaatatattttcaaactgcttgatattgagaacaaaggatacctgaatgtcttttca
cttaattatttctttagggatgaaatctttgacatggtaaaaccaaaggatcctttgaaa
atctctcttcaggatttaatcaacagtaatcaaggagacacagtaaccaccattctaatc
gatttgaatggcttctggacttacgagaacagagaggctcttgttgcaaatgacagtgaa
aactctgcagaccttgatgatacatga

>gi568815584f:34896710_35129149|GENSCAN_predicted_peptide_5|555_aa
MVLLQRRPKLTKPDFKGHDKPAFSFIVCLWRAERLSPGQSRPSVGAGAVHRGHCSFRRVY
GRVKSECRFELLNEVNFICQRSLTRHLLPPRPPTGGVLRSVESYAGLELGVPGYGFGFTP
PFQQASRGNLFLFRTAVIHVHELECKRHQRIPALSPGLRLATLDIPGLLFNRENSPAFLL
LSSPKSRTLICLFPKLWKSPYLGLGPGHSYVSLFLADRCGIRNQQRLFSLKTMSPQNTKA
TNLIAKARYLRKDEGSNKQVYSVPHFFLAGAAKERSQMNSQTEDHALAPVRNTIQLPTQP
LNSEEWDKLKEDLKENTGKTSFESWIISQMAGCHSSIDVAKSLLAWVAAKNNGIVSYDLL
VKYLYLCVFHMQTSEVIDVFEIMKARYKTLEPRGYSLLIRGLIHSDRWREALLLLEDIKK
VITPSKKNYNDCIQGALLHQDVNTAWNLYQELLGHDIVPMLETLKAFFDFGKDIKDDNYS
NKLLDILSYLRNNQLYPGESFAHSIKTWFESGQCSGCGKTIESIQLSPEEYECLKGKIMR
DVIDGGDQYRKTTPQ

>gi568815584f:34896710_35129149|GENSCAN_predicted_CDS_5|1665_bp
atggttctccttcagaggcgacccaagctcaccaagccggattttaaaggccacgataag
cccgcgttttcctttatcgtgtgcctttggcgcgcggaacgcctaagtccgggtcagtct
cgtccgtcggtcggggctggcgcggtgcatcgtgggcactgtagtttccgccgcgtttat
ggccgcgttaagtctgagtgccgctttgagttgttgaatgaagtgaacttcatttgtcag
cgttcgctgactcgccacctcctccctcctcgtccccccaccggaggagttttgcggtct
gtagagagctatgcagggctggagttgggggtccctggatacggttttggctttacaccc
cctttccagcaagcttcccgtgggaatctgttccttttcaggacagctgtgatccacgtt
catgaactggaatgtaagaggcaccagaggattcctgctctgtcccctggtttgcggctt
gcgacgttggacatccccggattgttgtttaatagagaaaactcacctgccttcttgctt
ttaagtagccccaaaagcagaaccttgatttgtctctttccgaagctttggaagagccca
taccttgggctaggcccagggcactcttatgtctcgctgtttctggcagaccgctgtggc
atcaggaaccagcagaggttgttttctcttaaaacaatgtctccacagaataccaaagca
acgaatctgattgccaaggccagatatctcaggaaagatgagggcagtaataagcaagtt
tattctgttcctcatttttttttagctggagcagctaaggagagatcacagatgaattct
caaactgaagatcatgccttggcacctgtgaggaacactattcaactcccaacacaacct
ttgaattcagaggagtgggataaacttaaggaagatttaaaagaaaacaccggaaagacc
agtttcgaaagttggatcatttcacagatggctggctgtcatagctctatagatgtggct
aaatctctgctggcatgggtagcagccaaaaataatggtattgtaagttacgatttactg
gtcaagtatttgtatctctgtgtctttcatatgcagacatctgaagttattgatgtcttt
gaaattatgaaagccagatataagactttagaacctagaggttacagtcttctcatccgg
ggattgatccattcagacagatggagagaagcattgttgctgttagaggacatcaaaaaa
gttataactccttcaaaaaagaactataatgactgtatccagggagctctccttcatcaa
gatgtaaacacagcttggaatttatatcaggaattgctaggtcatgatattgttcctatg
ttggaaactttaaaagctttctttgattttggaaaagacataaaggatgataactattca
aataaactactagatattctttcatatctaagaaataatcagctgtatccaggggagtca
tttgcacacagtataaaaacatggtttgagagtggccagtgttcgggctgtggaaaaacc
atagagtctattcagctgagtccagaagaatatgaatgtcttaagggaaaaatcatgagg
gatgtgatagatggaggtgaccagtacagaaagacaacacctcag