GENSCAN 1.0	Date run:  6-Nov-116	Time: 14:27:46

Sequence gi568815584r:34335204_34562207 : 227004 bp : 43.65% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   2647   2642    6                               1.05
 1.02 Term -  10747  10610  138  1  0   83   55   103 0.801   4.46
 1.01 Init -  10903  10856   48  1  0   77   45    71 0.437   0.76
 1.00 Prom -  16562  16523   40                              -5.06

 2.00 Prom +  17156  17195   40                              -3.16
 2.01 Init +  19271  19415  145  1  1   60   80    77 0.732   4.38
 2.02 Intr +  24890  24981   92  0  2   93   84    -1 0.180  -0.29
 2.03 Intr +  44325  44501  177  2  0   22   89    99 0.145   3.52
 2.04 Intr +  52218  52279   62  2  2   95   66    24 0.019  -1.57
 2.05 Intr +  53948  54088  141  2  0   22  108   122 0.043   7.07
 2.06 Intr +  59741  59885  145  2  1   14   81   102 0.177   2.38
 2.07 Term +  74554  74664  111  0  0   99   43    39 0.309  -0.94
 2.08 PlyA +  75329  75334    6                               1.05

 3.00 Prom +  89886  89925   40                              -2.46
 3.01 Sngl +  97221  97556  336  2  0   56   38   232 0.883  11.03
 3.02 PlyA +  97595  97600    6                               1.05

 4.06 PlyA -  97744  97739    6                               1.05
 4.05 Term - 126541 126480   62  2  2   69   42    70 0.469  -1.53
 4.04 Intr - 127533 127513   21  1  0   75  116    18 0.211   0.82
 4.03 Intr - 127871 127787   85  2  1   89  111    19 0.372   3.69
 4.02 Intr - 134291 134202   90  2  0   95  115    54 0.961   8.99
 4.01 Init - 135283 135221   63  1  0   82  102    12 0.944   1.38
 4.00 Prom - 139214 139175   40                              -3.46

 5.00 Prom + 142092 142131   40                              -6.06
 5.01 Sngl + 150776 151249  474  1  0   91   47   491 0.997  41.41
 5.02 PlyA + 153497 153502    6                               1.05

 6.10 PlyA - 155478 155473    6                               1.05
 6.09 Term - 181383 181107  277  2  1   90   41   141 0.325   4.53
 6.08 Intr - 194272 194155  118  2  1    5   78    94 0.447  -0.38
 6.07 Intr - 198336 198241   96  1  0   45  111    82 0.900   6.18
 6.06 Intr - 201072 200891  182  2  2   21   57   175 0.944   7.21
 6.05 Intr - 204441 204352   90  2  0    7   80   206 0.029  10.81
 6.04 Intr - 206384 206213  172  0  1   23   29   136 0.006   0.20
 6.03 Intr - 211679 211519  161  1  2   64  111    44 0.034   3.93
 6.02 Intr - 221563 221411  153  0  0  127    9    64 0.046   1.59
 6.01 Init - 224861 224800   62  2  2   78   75    54 0.274   3.82

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 204425 204352   74  2  2  110   80   161 0.965  18.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:34335204_34562207|GENSCAN_predicted_peptide_1|61_aa
MGPALRAASRCCQPRAGRAWDLQPTMPEPPCPCRGLLHSLRLHDECRPLLRGAWSHRLPK
G

>gi568815584r:34335204_34562207|GENSCAN_predicted_CDS_1|186_bp
atgggccctgcactcagagcagccagccgatgctgccagccccgggcaggcagagcttgg
gacctgcagcccaccatgcccgagcctccctgcccctgccgtgggctcctgcacagcctg
agactccacgacgagtgccgccccctgctccgtggcgcctggtcccatcgactgcccaag
ggctga

>gi568815584r:34335204_34562207|GENSCAN_predicted_peptide_2|290_aa
MTSKPSLDQKIAQRTQRAQNTNPWSFGIQERSYDDPQLLQESNGHNGPAHRSRFLILPNK
NDLLSYARNEVLGQKKYKELYENTVARAQEASREYLALGNTGFDSGGIEKSFEGDLPSAD
EKNASLSFLAPSLGWQGQMPTPTLNSVPRNTCVVKDVNRSAQWNSPMQQDMNLAVAPVLI
CCDLSDREGKITVWRKLNEIKDNTDKLNQEEVESLNRPITSFEIEAVINSLPTKKSPGPD
GFTAKFYQRYREEQTQDSGLLLQTQAPSQFQHQATLADPGSRPTPIDSNS

>gi568815584r:34335204_34562207|GENSCAN_predicted_CDS_2|873_bp
atgacttccaaacccagtttggatcagaaaattgctcagagaactcagagagctcaaaac
acaaatccatggagctttggaatccaagagagaagttatgatgatccccagttgctgcaa
gagagcaatggacacaatgggcccgctcataggtcccgctttctgattcttcccaacaag
aatgatttactttcctatgccagaaatgaagttctgggacaaaaaaaatataaggagctg
tatgagaacactgtggccagagctcaggaggcctccagggaataccttgctctgggaaac
acaggctttgattcaggcggcattgagaaatcctttgagggagacctcccatctgctgat
gagaagaatgcttccctctcattcttggcaccctcacttggctggcaaggtcagatgcca
acccctactctaaactctgttccacggaacacctgtgttgtaaaagatgttaataggagt
gcccaatggaacagccccatgcaacaggacatgaacctggctgttgctccagttttgatc
tgctgtgacctttcagacagagaaggcaaaataactgtttggaggaaactcaatgaaatt
aaagataacactgacaaactaaaccaggaagaagtcgaatccctgaatagaccaataaca
agttttgaaattgaggcagtaattaatagcttaccaaccaaaaaaagcccaggaccagat
ggattcacagccaaattctaccagaggtacagagaggagcagacccaggattcaggcttg
ctcctgcaaactcaagctccaagtcaattccagcaccaggccacccttgcagacccaggc
tctagacctacaccaatagactcaaattcctga

>gi568815584r:34335204_34562207|GENSCAN_predicted_peptide_3|111_aa
MAYTPGEGAMNIVEITMKDLGYFINLVDKAAAGFERIASNFGGSSIVGKRLSNSLHATEK
SFMNEELINAANFIVVLFLKIAIATPTFRNHDPDQSAAINIKARPSTNKKL

>gi568815584r:34335204_34562207|GENSCAN_predicted_CDS_3|336_bp
atggcatatacacctggtgaaggtgctatgaacattgttgaaattacaatgaaggactta
ggatattttataaacttagttgataaagcagcagcagggtttgaaaggattgcttccaat
tttggaggaagttccattgtgggtaaaaggctatcaaatagcttacatgctacagagaaa
tctttcatgaatgaagagttgatcaatgcagcaaactttattgttgtcttatttttaaaa
attgccatagccaccccaaccttccgcaaccatgacccagatcagtcagcagccatcaac
atcaaggcaagaccctccaccaacaaaaaattatga

>gi568815584r:34335204_34562207|GENSCAN_predicted_peptide_4|106_aa
MNSSRAGSVLPALSLPQPLAKVGNTFSIEIFLDLKVRDDPRLINRDSQRQQNPLDQRASG
LDPLGGYLQPLRGGQIDVFARPPAAQGGGDHVTVEHIAPGLDAFDL

>gi568815584r:34335204_34562207|GENSCAN_predicted_CDS_4|321_bp
atgaactcctcaagggctggctctgtgctacctgccctatcactcccacagcccctggca
aaggttggaaatacttttagtatagaaattttcttggatctgaaagtacgagatgatcca
cggttaataaacagggatagccagcggcagcagaacccactagatcagcgcgcttctggc
cttgacccacttggtggttacctacagccactaagaggtgggcagatagatgtttttgct
aggccgccagctgcacaaggaggcggggatcatgtaacagtggagcacatcgctcccggc
ttggacgcctttgacctttaa

>gi568815584r:34335204_34562207|GENSCAN_predicted_peptide_5|157_aa
MALKAKKEALAPPKAEAKAKALKAKKAVMKDVHIHKKRRPARHPPSRGPGHCDSRPPKYP
RKSAPRRNKLDRYAIIKFLWTTESAMKKIEDNTTYVFRVDVKANKQQIKQAVKKLPDNDA
AKVNTLIRPDGEKKAYVQLAPDYDVLDVAKKKWDHLN

>gi568815584r:34335204_34562207|GENSCAN_predicted_CDS_5|474_bp
atggcgttgaaagcaaagaaggaagcgcttgcccctcctaaagccgaagccaaagcgaag
gctttaaaggccaagaaggcagtgatgaaagatgtccacatccacaaaaaaagaagaccc
gcacgtcacccaccttccagaggcccaggacactgcgactcgaggccacccaaatatcct
cggaagagcgcccccaggagaaacaagcttgaccgttatgccatcatcaagtttctgtgg
accactgagtccgccatgaagaagatagaagacaacaccacatatgtgttcagggtggat
gttaaagccaacaagcagcagatcaaacaggctgtgaagaagctccctgacaatgatgcg
gccaaggtcaacaccctgattcggcccgatggagagaagaaggcatatgttcaactggct
ccagattacgatgttttggatgttgccaaaaaaaaatgggatcatctaaactga

>gi568815584r:34335204_34562207|GENSCAN_predicted_peptide_6|436_aa
MIVASRYQGGRYTPGLSLTSRPPFQVPDSRPRAHLRPTSPGDTQACPTPSVGPRSGSGRD
RSAGDDPGKGVAKAGESANAVPHYHKLCSRVSHIWGNRRGQHIRSAMDKPRPGKTTFVIM
VSPLPEQQMKGLDLDPEARALGPAFIHWWTSHGLIFTSEGYVKDKTHSASNGNSTVQTAL
GNMPLQATMNRLPDDYDPYAVEEPSDEEPALSSSEDEVDVLLHGTPDQKRKLIRECLTGE
SESSSEDEFEKEMEAELNSTMKTMEDKLSSLGTGSSSGNGKVATAPTRYYDDIYFDSDSE
DEDRAVQVTKKKKKKQHKIPTNDELLYDPEKDNRDQAWVDAQRRGHESYKTQYRAMFVMN
CSINKEEVLRYKASENRKKRRVHKKMRSNREDAAEKAETDVEEIYHPVMCTECSTEVAVY
DKDEVFHFFNVLASHS

>gi568815584r:34335204_34562207|GENSCAN_predicted_CDS_6|1311_bp
atgattgttgcttccaggtaccaaggcggccgctacactccaggcctgagtctgacttcc
aggcctccctttcaggtcccagactcccggccgcgcgcccacttgcgcccaaccagcccc
ggagacacccaggcctgtcccacgccgtcggtaggtccccggtccgggagcgggagagac
cggagcgccggggacgaccccggcaagggcgtggctaaggcaggggaaagcgcgaacgca
gtcccccactaccacaaattatgcagtcgagtttcccacatttggggaaatcgcaggggt
cagcacatccggagtgcaatggataagcctcgccctgggaaaaccaccttcgtgatcatg
gtatctcccctgccagagcagcagatgaagggcctagacctggatccagaagctagggct
ctcggtccagcattcatccactggtggacatcacatgggcttatttttaccagcgaaggt
tacgtgaaggacaaaacgcactcagccagcaacggaaactcaacagttcaaacagcactg
gggaacatgccgctgcaggccaccatgaaccggcttccggatgactacgacccctacgcg
gttgaagagcctagcgacgaggagccggctttgagcagctctgaggatgaagtggatgtg
cttttacatggaactcctgaccaaaaacgaaaactcatcagagaatgtcttaccggagaa
agtgaatcatctagtgaagatgaatttgaaaaggagatggaagctgaattaaattctacc
atgaaaacaatggaggacaagttatcctctctgggaactggatcttcctcaggaaatgga
aaagttgcaacagctccgacaaggtactacgatgatatatattttgattctgattccgag
gatgaagacagagcagtacaggtgaccaagaaaaaaaagaagaaacaacacaagattcca
acaaatgacgaattactgtatgatcctgaaaaagataacagagatcaggcctgggttgat
gcacagagaagggggcatgaatcatacaaaactcaatatagagcaatgtttgtaatgaat
tgttctattaacaaagaggaggttctaagatataaagcctcagagaacaggaagaaaagg
cgggtccataagaagatgaggtctaaccgggaagatgctgccgagaaggcagagacagat
gtggaagaaatctatcacccagtcatgtgcactgaatgttccactgaagtggcagtctac
gacaaggatgaagtctttcattttttcaatgttttagcaagccattcctaa