GENSCAN 1.0	Date run:  8-Nov-116	Time: 05:52:59

Sequence gi568815584f:28667280_28868746 : 201467 bp : 37.05% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    310    305    6                               1.05
 1.02 Term -   6469   6348  122  2  2   84   42   150 0.490   7.66
 1.01 Init -  10184  10094   91  2  1   59   17    81 0.322  -1.20
 1.00 Prom -  10362  10323   40                              -6.25

 2.00 Prom +  11214  11253   40                              -1.85
 2.01 Sngl +  16653  17105  453  2  0   87   54   232 0.915  15.84
 2.02 PlyA +  21700  21705    6                               1.05

 3.03 PlyA -  22026  22021    6                               1.05
 3.02 Term -  25379  25191  189  2  0   11   47   135 0.673  -1.83
 3.01 Init -  28676  28593   84  2  0   85   90    87 0.863   9.47
 3.00 Prom -  81645  81606   40                              -1.85

 4.02 PlyA -  82051  82046    6                               1.05
 4.01 Sngl -  94586  94335  252  2  0   44   42   282 0.749  14.04
 4.00 Prom -  96055  96016   40                              -6.15

 5.00 Prom +  96275  96314   40                              -7.35
 5.01 Init +  98037  98209  173  2  2   53   -5   157 0.763   1.87
 5.02 Intr +  98613  98734  122  0  2   23   91   142 0.547   7.22
 5.03 Intr +  99497  99680  184  0  1   17   23    92 0.452  -6.48
 5.04 Term +  99838 101470 1633  1  1   11   38  1341 0.797 109.65
 5.05 PlyA + 102365 102370    6                               1.05

 6.04 PlyA - 102417 102412    6                               1.05
 6.03 Term - 106705 106572  134  2  2   61   44   105 0.650   0.67
 6.02 Intr - 106806 106717   90  1  0   39   50   165 0.404   6.85
 6.01 Init - 107294 106931  364  2  1   53   -7   332 0.574  15.47
 6.00 Prom - 109594 109555   40                              -6.75

 7.00 Prom + 110121 110160   40                              -8.45
 7.01 Init + 110598 110712  115  2  1   61   86    74 0.495   4.92
 7.02 Intr + 111000 111123  124  1  1   30    7   171 0.177   1.92
 7.03 Term + 118069 118432  364  1  1   58   54   226 0.608   9.25
 7.04 PlyA + 120567 120572    6                               1.05

 8.00 Prom + 128964 129003   40                              -3.05
 8.01 Init + 161892 162005  114  2  0   35  110   109 0.231   8.06
 8.02 Term + 179047 179346  300  0  0   76   34   177 0.044   5.34
 8.03 PlyA + 179366 179371    6                               1.05

 9.00 Prom + 180395 180434   40                              -6.15
 9.01 Sngl + 180556 181050  495  0  0   44   41   241 0.492  10.80
 9.02 PlyA + 181204 181209    6                               1.05

10.00 Prom + 181271 181310   40                              -8.05
10.01 Init + 182315 182738  424  1  1   60   65   208 0.227  12.25
10.02 Term + 182988 183382  395  1  2   -5   50   231 0.204   4.21
10.03 PlyA + 183429 183434    6                              -0.45

11.00 Prom + 183612 183651   40                              -2.75
11.01 Init + 190183 190341  159  0  0   58   54   106 0.357   4.09
11.02 Term + 190806 190964  159  2  0   -4   42   211 0.731   4.26
11.03 PlyA + 192473 192478    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 175700 175808  109  1  1   92   66    50 0.883   3.63


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:28667280_28868746|GENSCAN_predicted_peptide_1|70_aa
MGPDSYNSKEVNFVYTKNDHEMRFFPDPQTNPYWLREDERRNYEPRKTRQTAGISAYWWE
RNCSQKEEGS

>gi568815584f:28667280_28868746|GENSCAN_predicted_CDS_1|213_bp
atgggtcctgactcctacaacagcaaggaggtgaattttgtctacacaaagaatgaccat
gaaatgagatttttcccagatcctcagacaaacccttactggctccgagaagatgaaaga
cgcaattatgaaccaagaaaaactcgccaaactgcaggcataagtgcgtattggtgggaa
aggaactgctcgcagaaagaagaaggttcatag

>gi568815584f:28667280_28868746|GENSCAN_predicted_peptide_2|150_aa
MGKYLQAMSETFPAAPHITGLQAQEEKVVLCARPRVPVQPRDLVPCVPDAPAMAERGQCR
AQTVASEGGSPKPWQLPHGVECVGAQKSRIGFGNLHLDFRRCTEMPGCPGKSLLQGQGPH
GEPLLEQCGKEMWSQSPHTESLLGHILLEL

>gi568815584f:28667280_28868746|GENSCAN_predicted_CDS_2|453_bp
atggggaaatatctccaggccatgtcagagaccttcccagcagcccctcacatcacaggc
ctgcaggcccaggaggaaaaagtggttttgtgcgccaggccaagggtccccgtgcagcct
agggacttggtgccctgtgtcccagatgctccagccatggcagaaaggggacaatgtaga
gctcagaccgtggcttcagagggtggaagccccaagccttggcagcttccacatggtgtt
gagtgtgtgggtgcacagaagtcaagaattgggtttggaaatctccacctagatttcaga
aggtgtacagaaatgcctggatgcccaggcaaaagtttgctgcaggggcagggccctcat
ggagaacctctgctagagcagtgtggaaaggaaatgtggagtcagagcccgcacacagag
tccctactggggcatatcctactggagctgtga

>gi568815584f:28667280_28868746|GENSCAN_predicted_peptide_3|90_aa
MAAHEMLLVQYLVDVIKPHYLGKSDSEKPGQQEQNSISKQQQQQQTKQQQQQTKQQQQQK
TLNDITQIVRMMEMVMVMMRMMLMIIANTY

>gi568815584f:28667280_28868746|GENSCAN_predicted_CDS_3|273_bp
atggcggcacatgagatgcttcttgtccagtaccttgtggatgtgataaaacctcattat
ctggggaaatctgactctgaaaagcctggtcaacaagagcaaaactccatctccaaacaa
caacaacagcaacaaaccaaacaacaacaacaacaaaccaaacaacaacagcaacagaaa
actcttaatgatataacacaaatagtgaggatgatggagatggtgatggtgatgatgagg
atgatgttaatgatcatagctaacacttactaa

>gi568815584f:28667280_28868746|GENSCAN_predicted_peptide_4|83_aa
MFSLCKLGSHFKREKVQGEEEEQEEEEDKDEEKALTETPGTLQASLCDAARCSRLSEAKY
VRSQKKSPVIFSKMCMGEALSRH

>gi568815584f:28667280_28868746|GENSCAN_predicted_CDS_4|252_bp
atgtttagcttgtgtaagctagggagccactttaaaagggagaaagtccaaggcgaagaa
gaggagcaggaggaggaagaggacaaggatgaggagaaggccttgacagagacccctggg
actctccaggcaagtctctgtgacgctgccaggtgttccaggctctctgaagccaagtac
gtacgcagccaaaagaaaagtcccgtgatcttcagcaaaatgtgcatgggagaagctttg
tcccgacattag

>gi568815584f:28667280_28868746|GENSCAN_predicted_peptide_5|703_aa
MLGLSPAPGHGILLKPPIRNFPIHFNLQPNLPSSKAQEAGTVRSTFPRLPGAFQQHSGPS
EAPTTERPRPPQQHPEPQSRFPRGAGARSSPPPRPQESTRKINCGYSRLDRCLPSLAAAA
PGRARPPPGSPPLWAAAAAAVTAAARGGGGGGSSGGGSGGARACGPTALLPERSVPPLPP
APPAPRSAPTGRRRPPRRCPAPAPPPPFPPDDWVMLDMGDRKEVKMIPKSSFSINSLVPE
AVQNDNHHASHGHHNSHHPQHHHHHHHHHHHPPPPAPQPPPPPQQQQPPPPPPPAPQPPQ
TRGAPAADDDKGPQQLLLPPPPPPPPAAALDGAKADGLGGKGEPGGGPGELAPVGPDEKE
KGAGAGGEEKKGAGEGGKDGEGGKEGEKKNGKYEKPPFSYNALIMMAIRQSPEKRLTLNG
IYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFI
GGTTGKLRRRSTTSRAKLAFKRGARLTSTGLTFMDRAGSLYWPMSPFLSLHHPRASSTLS
YNGTTSAYPSHPMPYSSVLTQNSLGNNHSFSTANGLSVDRLVNGEIPYATHHLTAAALAA
SVPCGLSVPCSGTYSLNPCSVNLLAGQTSYFFPHVPHPSMTSQSSTSMSARAASSSTSPQ
APSTLPCESLRPSLPSFTTGLSGGLSDYFTHQNQGSSSNPLIH

>gi568815584f:28667280_28868746|GENSCAN_predicted_CDS_5|2112_bp
atgctgggccttagccctgcccctggccacgggatccttttaaagcccccgattcgcaat
ttccccattcacttcaacctccaaccgaaccttcccagttccaaagcccaagaagctggg
actgtgagatccacgttcccaaggctccccggtgctttccagcagcactcagggccatca
gaggcgcccactactgagcggccccggccgccgcagcagcacccggagccccagtcccgg
tttccccgcggtgccggagcccggagctcgccgccgcccaggcctcaggaatcgactcgg
aaaattaattgtggctatagccgcctcgatcgctgtctccccagcctcgccgcggccgct
ccgggacgcgcccgcccgccgcccggctctccccccctttgggctgctgctgctgctgct
gtgactgctgctgcgagaggaggaggaggaggaggaagcagcgggggggggagcgggggc
gcccgagcctgcggtccaactgcgctgctgccggagcgctcagtgccgccgctgccgccc
gcgccccccgcgccccgttcggcacccaccggtcgccgccgcccgccgcgccgctgtccc
gctcccgcgccgccgccgccgtttccccccgacgactgggtgatgctggacatgggagat
aggaaagaggtgaaaatgatccccaagtcctcgttcagcatcaacagcctggtgcccgag
gcggtccagaacgacaaccaccacgcgagccacggccaccacaacagccaccacccccag
caccaccaccaccaccaccaccatcaccaccacccgccgccgcccgccccgcaaccgccg
ccgccgccgcagcagcagcagccgccgccgccgccgcccccggcaccgcagcccccccag
acgcggggcgccccggccgccgacgacgacaagggcccccagcagctgctgctcccgccg
ccgccaccgccaccaccggccgccgccctggacggggctaaagcggacgggctgggcggc
aagggcgagccgggcggcgggccgggggagctggcgcccgtcgggccggacgagaaggag
aagggcgccggcgccgggggggaggagaagaagggggcgggcgagggcggcaaggacggg
gaggggggcaaggagggcgagaagaagaacggcaagtacgagaagccgccgttcagctac
aacgcgctcatcatgatggccatccggcagagccccgagaagcggctcacgctcaacggc
atctacgagttcatcatgaagaacttcccttactaccgcgagaacaagcagggctggcag
aactccatccgccacaatctgtccctcaacaagtgcttcgtgaaggtgccgcgccactac
gacgacccgggcaagggcaactactggatgctggacccgtcgagcgacgacgtgttcatc
ggcggcaccacgggcaagctgcggcgccgctccaccacctcgcgggccaagctggccttc
aagcgcggtgcgcgcctcacctccaccggcctcaccttcatggaccgcgccggctccctc
tactggcccatgtcgcccttcctgtccctgcaccacccccgcgccagcagcactttgagt
tacaacggcaccacgtcggcctaccccagccaccccatgccctacagctccgtgttgact
cagaactcgctgggcaacaaccactccttctccaccgccaacggcctgagcgtggaccgg
ctggtcaacggggagatcccgtacgccacgcaccacctcacggccgccgcgctagccgcc
tcggtgccctgcggcctgtcggtgccctgctctgggacctactccctcaacccctgctcc
gtcaacctgctcgcgggccagaccagttactttttcccccacgtcccgcacccgtcaatg
acttcgcagagcagcacgtccatgagcgccagggccgcgtcctcctccacgtcgccgcag
gccccctcgaccctgccctgtgagtctttaagaccctctttgccaagttttacgacggga
ctgtctgggggactgtctgattatttcacacatcaaaatcaggggtcttcttccaaccct
ttaatacattaa

>gi568815584f:28667280_28868746|GENSCAN_predicted_peptide_6|195_aa
MLLLPAQRPASPSAGIAAAMSRERFSSPPPPPRSQGGPNSAAEVTSPHRFKTRENNAARS
LPQRLQVPPLCHLSIFTPESLRRREKLINRTPRRESQIRFGPSQPVSGACSQPLWDREAL
ELFRRDRREDSHTHPVPHPTRSSPAKSDRDPGQGAGGGGPALGKVGYVSVQIEKGDPKKN
FREKQVLGSGAKSFN

>gi568815584f:28667280_28868746|GENSCAN_predicted_CDS_6|588_bp
atgttgctgctccctgcgcagcgcccggcttcaccctctgcggggatcgccgccgcaatg
tcccgagagcgcttctcctctcctcctccgccaccgcgcagccagggcggccccaactca
gcagctgaagttacttctccacaccggttcaaaacccgagaaaacaacgctgccaggtcc
ctgccacaacgacttcaagtcccgccattatgccacctctccatcttcaccccggagtcc
ctgaggcgccgggaaaagctaattaataggacaccgcgacgagagtcccaaattcgcttc
gggccgagccaacctgtgtctggcgcgtgctctcagccactctgggacagagaggctctc
gagctctttcgaagagacagaagagaagactcccacacgcacccagtgcctcacccgacc
cggagcagcccggctaaatccgaccgggaccctggccaaggagctgggggcggagggcca
gctctggggaaggttggctatgttagtgtgcaaatagagaagggcgatccaaagaagaac
tttagagagaagcaggttcttggctctggagcaaagagctttaactga

>gi568815584f:28667280_28868746|GENSCAN_predicted_peptide_7|200_aa
MEKELIFSPWRVFLKLLILSVSAVRGGAAQSRGWLQTEGVVDSVDLNCCPSFQAFPVNEP
ENTRQVVNNRFNECAKRATGHTFGPPPELRCPRVTAFCDRVRRDPVPLSPSVFREGEALR
ISGAVQQPRPHPRGSRPRGPFTSPSGLGDANSPKKTLAEERGPFTTNLTSGLQPHLGTSS
EKLRNHCFAKSLLYCDGALW

>gi568815584f:28667280_28868746|GENSCAN_predicted_CDS_7|603_bp
atggaaaaggaattaatcttctcaccctggcgagttttcctgaaactacttatccttagc
gtcagcgctgtaagaggtggagccgctcagtcccgcgggtggctgcagacagaaggggta
gtggacagtgttgacttgaattgctgtccctcgttccaagcctttcctgtgaatgaaccc
gaaaacactcgacaggtcgtgaataatcgttttaatgagtgtgcaaagcgtgcgacggga
cacactttcggtcccccgccagagctccggtgcccccgagtgaccgctttctgcgatcgc
gtccgccgggaccccgtccctctttccccttcagtcttcagggagggggaggcgctccgc
attagcggggcagttcagcaaccccgaccccacccgcgtggctccaggcccaggggtccg
ttcacttccccgtccggtttgggggacgccaattcgcctaagaaaaccctggcagaagag
cgcggacccttcactacaaacctcacgtcagggttacagccacatttaggaacctcttcg
gaaaagctgagaaatcactgttttgcaaaaagccttctgtactgtgatggggctttgtgg
tga

>gi568815584f:28667280_28868746|GENSCAN_predicted_peptide_8|137_aa
MLRILVKEEAEVSELSDCLETEKHAETSYSDGAINPGQDPSSLPATEQSWTENDFDELTE
VDFRRLVIRNFSELKERVLTHHKEAKNLEKRLDEWLTRINSVEKTLNDLMELTWQENFMT
HTQASIADLIKWKKGYQ

>gi568815584f:28667280_28868746|GENSCAN_predicted_CDS_8|414_bp
atgttaaggatactggttaaagaggaagcagaagtgtcagagttgagtgactgcttagaa
actgagaagcatgcagaaaccagttattcagatggagcaattaatccagggcaggatccc
agctccttaccagcaacagaacaaagctggacggagaatgactttgacgagttgacagaa
gtagacttcagaaggttggtaataagaaacttctctgagctaaaggagcgtgttctaacc
catcacaaggaagctaaaaaccttgaaaaaaggttagacgaatggctaactagaataaac
agtgtagagaagaccttaaatgacctgatggagctgacatggcaggagaacttcatgacg
catacacaggcttcaatagccgatttgatcaagtggaagaaaggatatcagtga

>gi568815584f:28667280_28868746|GENSCAN_predicted_peptide_9|164_aa
MQDLNSSWHQVDLIDIYRTLHPKSTEYTFFSAPHHTYSKIDHIVGSKALLSKYKRSEITT
NSLLDHSAIKLESRIKKLTQNCTTTWKLNNLLLNDYWVNNEMKAEIKVFFETNENKDTMY
QNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELEKQE

>gi568815584f:28667280_28868746|GENSCAN_predicted_CDS_9|495_bp
atgcaggacttgaactcatcctggcaccaagtggacctaatagacatctacagaactctc
caccccaaatcaacagaatatactttcttctcagcaccacatcacacttattctaaaatt
gaccacatagttggaagtaaagcactcctcagcaaatataaaagatcagaaatcacaaca
aactctctcctggaccacagtgcaatcaagttagaatccaggattaagaaactcactcaa
aactgcacaactacatggaaactgaacaacctgctcctgaatgattactgggtaaataat
gaaatgaaggcagaaataaaggtgttctttgaaaccaatgagaacaaagacacaatgtac
cagaatctctgggacacatttaaagcagtgtgtagagggaaatttatagcactaaatgcc
cacaagagaaagcaggaaagatctaaaatcgacaccctaacatcacaattaaaagaacta
gagaagcaagagtaa

>gi568815584f:28667280_28868746|GENSCAN_predicted_peptide_10|272_aa
MSELPFTIATKKIKYLGIQLTTDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWIGGINIM
KMAILPKVIYRFNALPIKIPMTFFTELEKTTLNFIWNQKRARIAKTILSTKNKAGGITLA
DFKLYYKPTLVKTAWYWYQNREENLGNTIQDIGMGKNFMTKTPKAMATKAKIDKRDLIKP
KSFCIAKETTIRMNRQPTEWEKLFAIYPSDKALISGIYKDLKQIYKKKNNPIKKWAKEMN
RHFSKEDIYAANRHVKNAHHHWSSEKCKSKPQ

>gi568815584f:28667280_28868746|GENSCAN_predicted_CDS_10|819_bp
atgagtgaactcccattcacaattgctacaaagaaaataaaatacctaggaatacaactt
acaacggatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaa
gaggacacaaacaaatggaagaacattccatgctcatggataggaggaatcaatatcatg
aaaatggccattctgcccaaggtaatttatagattcaatgctctccccatcaagatacca
atgactttcttcacagaattggaaaaaactactttaaatttcatatggaaccaaaaacga
gcccgcatagccaaaacaatcctaagcacaaagaacaaagctggaggcatcacactagct
gacttcaaactgtactacaagcctacactagtcaaaacagcatggtactggtaccaaaac
agagaagaaaacctaggcaataccattcaggacataggcatgggcaaaaacttcatgact
aaaacaccaaaagcaatggcaacaaaagccaaaatagacaaaagggatctaattaaacca
aagagcttctgcatagcaaaagaaactaccatccgtatgaacaggcagcctacagaatgg
gagaaactttttgcaatctacccgtctgacaaagcgctaatatccggaatctacaaagat
cttaagcaaatttacaagaaaaaaaacaaccccatcaaaaagtgggcaaaggagatgaac
agacacttctcgaaagaagacatttatgcagccaacagacacgtgaagaatgctcatcat
cactggtcatcagagaaatgcaaatcaaaaccacaatga

>gi568815584f:28667280_28868746|GENSCAN_predicted_peptide_11|105_aa
MAILIIISMAMSQRRYSELAQPCGGEGMKSLCHWDPFSAGWSEDTDAFTETRVVIQQVKI
WYRLQNQHPSDDELTGLLVVGPNPLRQQKIGAYYVKLVFLNHNVL

>gi568815584f:28667280_28868746|GENSCAN_predicted_CDS_11|318_bp
atggcaatcttgatcattatctcaatggccatgtcacagaggcgatattcagaacttgcc
caaccctgtggtggtgaagggatgaagtcactgtgtcactgggaccctttcagtgctggc
tggagtgaagacacagatgcctttactgaaactagggtcgtaatccagcaggttaaaatc
tggtacaggctccagaaccagcatccaagtgatgatgaactgacaggcctactggttgtt
ggaccaaatcctctccggcaacagaagattggagcctactatgtcaaacttgtttttctc
aatcacaacgtgctttaa