GENSCAN 1.0	Date run:  8-Nov-116	Time: 12:32:58

Sequence gi568815585r:102946136_103166249 : 220114 bp : 39.27% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   5681   6004  324  1  0   29   49   213 0.455   5.28
 1.02 PlyA +   6095   6100    6                               1.05

 2.08 PlyA -   6733   6728    6                               1.05
 2.07 Term -   7370   7205  166  1  1   75   33   192 0.771   8.81
 2.06 Intr -  10593  10357  237  2  0   45   65   124 0.454   1.61
 2.05 Intr -  11158  10974  185  1  2    7   93   165 0.271   6.56
 2.04 Intr -  12874  12771  104  2  2  109   84   -37 0.125  -3.03
 2.03 Intr -  13699  13613   87  2  0   92   76    30 0.181   1.22
 2.02 Intr -  15709  15554  156  2  0   91   12    84 0.109   0.16
 2.01 Init -  17757  17610  148  0  1   71   99    99 0.991   9.60
 2.00 Prom -  21902  21863   40                              -5.85

 3.06 PlyA -  23005  23000    6                               1.05
 3.05 Term -  24058  23913  146  2  2   80   42   147 0.904   6.39
 3.04 Intr -  27389  27353   37  2  1   84   92    49 0.952   1.82
 3.03 Intr -  28979  28689  291  2  0   65   93   159 0.805  10.51
 3.02 Intr -  52730  52672   59  0  2   93   99     7 0.588  -0.02
 3.01 Init -  53935  53734  202  1  1   70   48   128 0.537   6.09
 3.00 Prom -  66543  66504   40                              -5.35

 4.03 PlyA -  67074  67069    6                               1.05
 4.02 Term -  69367  69275   93  1  0  100   44    74 0.662   1.05
 4.01 Init -  71008  70880  129  1  0   73   75   126 0.702  10.00
 4.00 Prom -  78781  78742   40                              -3.75

 5.02 PlyA -  78999  78994    6                               1.05
 5.01 Sngl -  81828  81322  507  0  0   68   44   252 0.955  14.72
 5.00 Prom -  84605  84566   40                              -5.55

 6.07 PlyA -  84651  84646    6                               1.05
 6.06 Term - 100125  99998  128  1  2  103   42    86 0.944   2.96
 6.05 Intr - 103311 103154  158  2  2   79   67   195 0.998  15.23
 6.04 Intr - 105297 105122  176  0  2  110   80    51 0.640   4.32
 6.03 Intr - 106573 106485   89  2  2  127  106    35 0.998   7.97
 6.02 Intr - 112247 112129  119  1  2   68   97    58 0.003   3.89
 6.01 Init - 120114 119738  377  0  2   69   94   338 0.364  28.95
 6.00 Prom - 126744 126705   40                              -6.05

 7.00 Prom + 126855 126894   40                              -5.35
 7.01 Init + 134315 134429  115  1  1   85  110    19 0.694   4.22
 7.02 Term + 150235 150368  134  2  2  103   32   128 0.543   5.97
 7.03 PlyA + 150377 150382    6                               1.05

 8.03 PlyA - 153088 153083    6                               1.05
 8.02 Term - 166363 166114  250  0  1   78   45   144 0.152   3.29
 8.01 Init - 173261 172318  944  2  2   86   53   222 0.170  11.69
 8.00 Prom - 199647 199608   40                              -3.05

 9.04 PlyA - 200682 200677    6                               1.05
 9.03 Term - 210698 210567  132  2  0   44   45   156 0.777   4.01
 9.02 Intr - 211068 210900  169  2  1   71  105    75 0.995   6.53
 9.01 Intr - 211194 211125   70  1  1   63   74    94 0.435   2.82

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  36613  36694   82  0  1   42   30   172 0.985   7.98
S.002 Term +  41516  41736  221  0  2   87   44   142 0.955   5.92
S.003 Init - 112240 112129  112  1  1   92   97   124 0.961  12.14


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:102946136_103166249|GENSCAN_predicted_peptide_1|107_aa
LPKEKGERNGISRLSLKGSDGFSNSRRKSSFLIEAAVPQQRCGATGLSGLQLLKAGRDHT
NQSAGSHTAVSRKAMTTNHRIRDETGPGRQLQHRVADRKTIDHAASA

>gi568815585r:102946136_103166249|GENSCAN_predicted_CDS_1|324_bp
ttacctaaggagaaaggagagaggaatggaataagcaggctttcactaaaaggctcagat
ggctttagtaattcaaggaggaaatcttcctttcttatagaagcagcagtgccgcagcag
cgttgcggggcaacaggactcagtggcctgcaactcttaaaggcggggagagaccacact
aaccagagtgctggcagccacacagcagtgtcaaggaaggcgatgacaaccaaccatcgt
atcagggatgaaacagggcctggcaggcagctgcaacaccgagtagcggataggaagact
atagatcatgcagcatctgcttag

>gi568815585r:102946136_103166249|GENSCAN_predicted_peptide_2|360_aa
MKETKHHNNPVSLIEVNGLRHLHDPKGAQTSKPVSLMSDVQLMSESSKGGFVGVSNPVTN
VCRDQEADWREMCMASSDPNRCHKNMLEEIRLVLGSASHLLGLQLIIKMFTADRILLQHR
TILELADTEIAHIYTMSIKVKFQALILRKLTSESSILLVFSVSMEKLIYDADVMLLIHPL
RMPTEAAPTASAVHGINLTQELVRNAGPWASSQTYWGKKLQFNKIPSLIDRNRLKLTLRW
VLEGATALAILPEKRQSESISGRILCLDFTANHISPDLRRDSAESKGPRGESGIINPFIG
DVIGFLTNNQGPQDMTLRVLLDVVLIRFTQIIHHEVLLVELPGFSFITTTDSLIDIGPVT

>gi568815585r:102946136_103166249|GENSCAN_predicted_CDS_2|1083_bp
atgaaagaaacaaaacaccacaacaatcctgtgtccttgattgaggtgaatgggctgaga
cacctccacgaccccaagggtgcacaaacatcaaaacctgtcagtttaatgtctgatgtt
cagctaatgtctgagtcatcaaaaggaggatttgtgggagtatccaaccctgtaacaaac
gtatgcagggaccaggaagccgactggagagaaatgtgcatggcctcatctgatccaaat
cggtgtcataagaacatgttggaagaaatcagattggtcctgggaagtgccagtcatctt
ttagggctgcagctcattataaaaatgttcacagcagatagaatcttgcttcagcaccgc
actattttagagctggcagacacagaaatcgctcatatttacacaatgagcattaaggtc
aagtttcaagccctaatcctcagaaaactgacatcagaatcatcaatactgttagtattt
agtgtgtccatggagaaacttatctacgatgctgatgtgatgctgctgatccatcctttg
aggatgcctacagaagctgctcctactgcaagtgcggttcatggcatcaacctcacccag
gagcttgttagaaatgcaggaccttgggcctcctcccagacttactggggtaagaagctg
cagtttaacaagatccccagtttgatagataggaatagattaaaactgactctcagatgg
gttctggaaggagccacagccctggccatcctccctgagaagagacagagtgagtccatc
agcggcaggatactctgccttgacttcacagctaatcatatttccccagatctgagaaga
gactcagcagaatctaagggccccagaggagaatcaggtatcattaacccttttattgga
gatgttattggttttctcaccaacaaccagggccctcaggacatgaccctgagagtcctc
cttgacgtggttctcatccgcttcactcaaataattcaccatgaagtcctactggtagaa
ctacctggcttcagtttcatcaccaccactgactcgctgattgacattggaccagtcact
taa

>gi568815585r:102946136_103166249|GENSCAN_predicted_peptide_3|244_aa
MNPGGHSSAQYRSYLWKGIHVVCVGCLTIHACWQLKALENKPPFVMNCIVQLAAAAQGYS
RLDTRTRYASCSKAGLKSLSIHEIGFLIKRKSARSSKETYSIKDPNSTCENQETKESQIH
TPVTFYKGMFGSSDLRLTQPDSDQAAFANPVLEGRGVWEKQLLGCIGDTIVSPAFGDRVS
LFSTVSDCPECDDSAQVSFKARLAQTYTHLQACQGLRVHMDVLNDKPVPVLALTNTERFG
KSNA

>gi568815585r:102946136_103166249|GENSCAN_predicted_CDS_3|735_bp
atgaatcctgggggacactcttcagcccagtacagaagctacctctggaaaggtatccac
gtggtatgtgtgggctgcttgaccatacacgcatgttggcaactcaaagctctagaaaat
aagcctccctttgtcatgaactgtattgttcagcttgctgcagctgcccagggctacagt
cgtctggacactagaacaagatatgcttcatgtagtaaagctggactcaagagcctcagc
atacatgagataggatttttgataaagagaaaatcagccaggagctccaaagagacctac
tctatcaaagatccaaattccacgtgtgagaaccaggaaacgaaagagtctcagatccac
actcctgtaacattttataagggcatgtttggcagctctgatctgaggctcacgcagcct
gactcagatcaagctgcatttgcgaatccagtgctggagggaaggggagtttgggagaag
caattactgggttgcatcggagacaccattgtatctcctgcattcggtgacagagtctca
cttttctccactgtcagtgattgccctgagtgtgatgacagtgctcaagtgtctttcaaa
gcacgtttggctcaaacatatacacatttgcaagcttgccaaggccttcgagtacacatg
gatgttctaaatgataaaccagtgccagtattagctttaactaacactgaacgctttggg
aaaagtaatgcatga

>gi568815585r:102946136_103166249|GENSCAN_predicted_peptide_4|73_aa
MEKKKEKERKKELQGGRGRRRGGGWGKGRERGGRGKKRRGGGETSALLVIGPWDSDWDFH
HQAPWFSGLHTQT

>gi568815585r:102946136_103166249|GENSCAN_predicted_CDS_4|222_bp
atggagaagaagaaagagaaggaaaggaagaaagagctacagggaggaagaggaagacga
agaggaggaggatgggggaaaggaagagaaagaggaggaagaggaaaaaagagaagagga
ggaggagagacatcggcactcctggttattgggccttgggactcagactgggactttcac
catcaggccccctggttctcaggtcttcacactcagacttag

>gi568815585r:102946136_103166249|GENSCAN_predicted_peptide_5|168_aa
MPCGHLWTQALGLLSARWVPAVSPTTSAPIAPCFNRPSWSLGGLGRQTSSHGLRIQVPLS
RSRTQDHSYGLRCQAHLSGPRYQANPGTWPVLADSGSEPKPPEQPLWTLASQIQAASISS
LWTQPTGGSSGSKPQAQPHGPAPRRTSRELQQQARPWIMPNSLPKIFE

>gi568815585r:102946136_103166249|GENSCAN_predicted_CDS_5|507_bp
atgccctgtggacacctgtggacacaagctctgggcttgcttagtgccagatgggtccct
gcagtctcacccaccacgtcggcccctatagccccatgcttcaacagacccagctggagc
ctgggaggccttggtagacagaccagttcccatggactgagaatccaggtacccctcagt
agatccaggacccaggaccattcctatggactcaggtgccaggcccacctcagtggaccc
aggtaccaagccaatcctggcacctggccagtccttgcagactcaggctcagaacccaaa
ccaccagaacagcctctatggaccctggcttcacagatacaggctgcaagcatatcctct
ctgtggacccaaccaacaggtgggtccagtggatccaagcctcaggctcaacctcatggc
ccagcaccaaggcgaacttccagagaactccagcagcaagcccgtccatggatcatgcca
aatagcctgcccaaaatctttgagtag

>gi568815585r:102946136_103166249|GENSCAN_predicted_peptide_6|348_aa
MNDPNSCVDNATVCSGASCVVPESNFNNILSVVLSTVLTILLALVMFSMGCNVEIKKFLG
HIKRPWGICVGFLCQFGIMPLTGFILSVAFDILPLQAVVVLIIGCCPGGTASNILAYWVD
GDMDLSVSMTTCSTLLALGMMPLCLLIYTKMWVDSGSIVIPYDNIGTSLVSLVVPVSIGM
FVNHKWPQKAKIILKIGSIAGAILIVLIAVVGGILYQSAWIIAPKLWIIGTIFPVAGYSL
GFLLARIAGLPWYRCRTVAFETGMQNTQLCSTIVQLSFTPEELNVVFTFPLIYSIFQLAF
AAIFLGFYVAYKKCHGKNKAEIPESKENGTEPESSFYKANGGFQPDEK

>gi568815585r:102946136_103166249|GENSCAN_predicted_CDS_6|1047_bp
atgaatgatccgaacagctgtgtggacaatgcaacagtttgctctggtgcatcctgtgtg
gtacctgagagcaatttcaataacatcctaagtgtggtcctaagtacggtgctgaccatc
ctgttggccttggtgatgttctccatgggatgcaacgtggaaatcaagaaatttctaggg
cacataaagcggccgtggggcatttgtgttggcttcctctgtcagtttggaatcatgccc
ctcacaggattcatcctgtcggtggcctttgacatcctcccgctccaggccgtagtggtg
ctcattataggatgctgccctggaggaactgcctccaatatcttggcctattgggtcgat
ggcgacatggacctgagcgtcagcatgaccacatgctccacactgcttgccctcggaatg
atgccgctgtgcctccttatctataccaaaatgtgggtcgactctgggagcatcgtaatt
ccctatgataacataggtacatctctggtttctctcgttgttcctgtttccattggaatg
tttgttaatcacaaatggccccaaaaagcaaagatcatacttaaaattgggtccatcgcg
ggcgccatcctcattgtgctcatagctgtggttggaggaatattgtaccaaagcgcctgg
atcattgctcccaaactgtggattataggaacaatatttcctgtggcgggttactccctg
gggtttcttctggctagaattgctggtctaccctggtacaggtgccgaacggttgctttt
gaaacggggatgcagaacacgcagctatgttccaccatcgttcagctctccttcactcct
gaggagctcaatgtcgtattcaccttcccgctcatctacagcattttccagctcgccttt
gccgcaatattcttaggattttatgtggcatacaagaaatgtcatggaaaaaacaaggca
gaaattccagagagcaaagaaaatggaacggagccagagtcatcgttttataaggcaaat
ggaggatttcaacctgacgaaaagtag

>gi568815585r:102946136_103166249|GENSCAN_predicted_peptide_7|82_aa
MEQSLSHLAYWKRQFLTLVKEKQTKPNPVVSFLITPVKGSFTDNGRSEQVAVAGQPAFPA
LTPWHSRWSVPRIILLCLRSNP

>gi568815585r:102946136_103166249|GENSCAN_predicted_CDS_7|249_bp
atggagcaaagcttgtcacatttagcttattggaaaaggcagtttcttactttagtcaaa
gagaaacaaaccaaacccaatcctgtggttagctttctaataactccagtgaagggatcc
ttcactgacaatggccgctcggagcaagtggcagttgcaggccagcccgccttccctgcc
ctcactccctggcacagtcgctggagtgtccctcggatcatacttctgtgtctgcggtcc
aacccttaa

>gi568815585r:102946136_103166249|GENSCAN_predicted_peptide_8|397_aa
MATLPKVIYRFSAIPIKLPMTFFTELEKTTLKFIQNQKRALIAKSILSQKNKAGGITLPD
FKLYYKATVTKTAWYWYQNRGIDQWNRTEPSEIMPHIYNCLIFDKPDKNKKWGNDSLFNK
WCWENWLAICRKLKLDPFLTPYTKINSRRIKDLHVRPKTIKTLEENLGNTIQDIGMGKDF
MSKTPKAMSTKAEIDKWDLIKLKSFCTAKETTIRVNRQPTEWEKIFATYLSDKGLISRIY
NELQQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSSSLAIRGMQIKTTMRYHL
TPVRMAIIKKSGNNSVVPSNYNTERVRNSVWLNEIENTKQEWLKQEVIYFSLKLTKYNGS
TVIRKPGHSQHLTAALWIKMAALALTAGPMESDRRRD

>gi568815585r:102946136_103166249|GENSCAN_predicted_CDS_8|1194_bp
atggccacactgcccaaggtaatttatagattcagtgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatacagaaccaaaaaagagcc
ctcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
ggtatagaccaatggaacagaacagagccctcagaaataatgccgcatatctacaactgt
ctgatctttgacaaacctgacaaaaacaagaaatggggaaacgattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaattaattcaagacggattaaagacttacatgttagacctaaaaccata
aaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttc
atgtctaaaactccaaaagcaatgtcaacaaaagccgaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaaccaccatcagagtgaacaggcaacctaca
gaatgggagaaaatttttgcaacctacttatctgacaaagggctaatatccagaatctac
aatgaactccaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcaaag
gatatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaaaaa
tgctcatcatcactggccatcagaggaatgcaaatcaaaaccacaatgagataccatctc
acaccagttagaatggcaatcattaaaaagtcaggaaacaacagcgtggtcccatccaat
tataatacagaacgggtaaggaattcagtttggcttaatgagatagaaaacacaaaacaa
gagtggctgaagcaagaagtgatttatttctctctcaaattgactaagtataatggctcc
acagtcattaggaaaccaggccattctcagcacttgacagcagctttgtggatcaagatg
gcagccttggctctaacagcaggtcccatggagtcggatagaagaagggactga

>gi568815585r:102946136_103166249|GENSCAN_predicted_peptide_9|123_aa
XQKIPERFATDPSKQVKAGSDTALEFHTEVTTLTRVVNAHIHPFTILDSVERDGDRAQQS
CITAFKVTCFIYVSLSPKELWVTAVADSAGKAGAGWTEPPEDAAPGFGGREPLEQMILKN
EVT

>gi568815585r:102946136_103166249|GENSCAN_predicted_CDS_9|372_bp
nctcaaaaaattcctgaacgttttgcaacagatccttccaagcaggtaaaagctggctct
gacacagcactggagttccatacagaggttacaacactaaccagagtggtgaacgctcac
atccatcccttcaccatactggacagcgtagagagggatggagacagagctcagcagagc
tgcatcacagccttcaaagttacctgctttatatatgtgtctctctcccccaaagagctg
tgggtcacagcagtagcagatagtgcaggcaaagctggggcagggtggactgagccacca
gaagacgcagcacctggctttggaggaagagagcctttagaacagatgatcctcaaaaat
gaggtcacctga