GENSCAN 1.0	Date run:  8-Nov-116	Time: 01:47:32

Sequence gi568815585f:97176236_97466553 : 290318 bp : 39.64% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    249    366  118  2  1   71   59    97 0.703   5.51
 1.02 Term +  13882  14021  140  2  2   41   36   160 0.406   3.24
 1.03 PlyA +  15174  15179    6                               1.05

 2.03 PlyA -  15448  15443    6                               1.05
 2.02 Term -  23994  23882  113  1  2   86   44    75 0.321   0.64
 2.01 Init -  25071  24999   73  0  1   65  116    62 0.593   7.98
 2.00 Prom -  26031  25992   40                              -6.85

 3.10 PlyA -  26696  26691    6                               1.05
 3.09 Term -  26796  26711   86  1  2   76   53   109 0.089   3.04
 3.08 Intr -  32247  32163   85  0  1   53   87    32 0.002  -1.93
 3.07 Intr -  48085  47823  263  2  2   38   87   127 0.032   3.88
 3.06 Intr -  54356  54267   90  0  0   37   89    84 0.067   2.45
 3.05 Intr -  57636  57566   71  2  2   83  100    70 0.089   5.61
 3.04 Intr -  62286  62156  131  0  2   72   44    65 0.036  -0.93
 3.03 Intr -  66396  66264  133  2  1   91   92    49 0.329   5.33
 3.02 Intr -  66670  66525  146  1  2   75  108    31 0.024   1.96
 3.01 Init -  80450  80376   75  2  0   17   95    75 0.115   2.24
 3.00 Prom -  83040  83001   40                              -6.25

 4.02 PlyA -  83657  83652    6                               1.05
 4.01 Sngl -  85653  85222  432  0  0   87   42   225 0.502  13.83
 4.00 Prom -  91050  91011   40                              -3.05

 5.00 Prom +  95806  95845   40                              -3.45
 5.01 Init + 100001 100174  174  1  0  100  116    73 0.894  10.69
 5.02 Term + 107993 108106  114  1  0  101   43    54 0.058  -0.21
 5.03 PlyA + 108327 108332    6                               1.05

 6.05 PlyA - 108661 108656    6                               1.05
 6.04 Term - 114852 114745  108  0  0  107   41    34 0.364  -1.87
 6.03 Intr - 121136 120991  146  0  2   52   50   180 0.469   9.68
 6.02 Intr - 122636 122521  116  1  2   50   84    59 0.369   0.87
 6.01 Init - 124454 124405   50  2  2   62   78    57 0.449   2.57
 6.00 Prom - 128727 128688   40                              -5.85

 7.00 Prom + 130368 130407   40                              -6.65
 7.01 Init + 132725 132880  156  1  0  101   63    55 0.148   4.26
 7.02 Intr + 139487 139614  128  1  2   20   68   115 0.324   1.26
 7.03 Intr + 142687 142796  110  1  2   77   96    86 0.516   7.31
 7.04 Intr + 143283 143314   32  1  2   76   80    53 0.247   0.23
 7.05 Intr + 158041 158205  165  0  0   69   89    62 0.113   3.64
 7.06 Intr + 159310 159432  123  0  0   75   69    38 0.041   0.46
 7.07 Intr + 160961 161077  117  1  0   56   52   102 0.306   3.14
 7.08 Intr + 166781 166981  201  1  0  109   65    91 0.978   7.46
 7.09 Intr + 170569 170832  264  0  0   81  115   235 0.979  22.29
 7.10 Intr + 181247 181400  154  1  1   84   91   182 0.979  16.82
 7.11 Term + 190810 190958  149  2  2   45   38   108 0.185  -1.42
 7.12 PlyA + 191217 191222    6                               1.05

 8.08 PlyA - 191862 191857    6                               1.05
 8.07 Term - 195395 195015  381  2  0   77   32   156 0.682   2.75
 8.06 Intr - 195849 195760   90  0  0   47   84    67 0.686   1.47
 8.05 Intr - 199038 198898  141  0  0   38  111    86 0.861   5.53
 8.04 Intr - 199394 199333   62  0  2   48   94    28 0.262  -3.07
 8.03 Intr - 204791 204659  133  2  1   38  115    65 0.277   3.50
 8.02 Intr - 210042 209955   88  2  1   43   83    58 0.308  -0.15
 8.01 Init - 211522 211305  218  1  2   93   50   155 0.397  10.42
 8.00 Prom - 223174 223135   40                              -1.95

 9.00 Prom + 225692 225731   40                              -6.15
 9.01 Init + 229464 229545   82  2  1   75   42    64 0.953   1.68
 9.02 Term + 231024 231172  149  1  2   78   33   178 0.990   8.38
 9.03 PlyA + 231435 231440    6                               1.05

10.00 Prom + 235333 235372   40                              -7.65
10.01 Init + 236175 236228   54  2  0   67   64    69 0.300   3.73
10.02 Intr + 236505 236567   63  2  0   88   94    38 0.297   2.40
10.03 Intr + 242800 242970  171  0  0   77   75   167 0.201  13.52
10.04 Intr + 254146 254224   79  0  1   60   48    80 0.008  -0.59
10.05 Intr + 256585 256860  276  2  0   55   64   225 0.619  13.37
10.06 Intr + 257025 257155  131  1  2   18   -3   166 0.414  -0.01
10.07 Intr + 258191 258549  359  1  2  -14   89   716 0.281  54.63
10.08 Term + 287970 288207  238  0  1   97   39   297 0.965  20.36
10.09 PlyA + 289438 289443    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 107098 106904  195  1  0  106   49   155 0.808   8.31


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:97176236_97466553|GENSCAN_predicted_peptide_1|85_aa
MEQCSPAHVNLKASPEHYTPLEGSEDAILTWTSTNVLQEAWQKADSNQPQQVTGAEAQPF
LKATHALEDADGDLSTFSSSLVLCK

>gi568815585f:97176236_97466553|GENSCAN_predicted_CDS_1|258_bp
atggagcagtgcagccctgcccatgtgaacctcaaagcctctccggagcattatactcct
ctagagggttcagaggatgcaatactcacctggacttccacgaatgtattgcaagaggca
tggcagaaagcggattccaaccagccacagcaggtgacaggagctgaagctcagcccttc
ctgaaagcaacccatgccctcgaggatgctgacggtgatctgagtacattttccagctcc
cttgttctgtgtaaataa

>gi568815585f:97176236_97466553|GENSCAN_predicted_peptide_2|61_aa
MKEKEKEIIGNGNANQTGGLCVSKDLLLTPLQGLEWVYVQLCAERYQHLQQVAHSMEAGG
G

>gi568815585f:97176236_97466553|GENSCAN_predicted_CDS_2|186_bp
atgaaggaaaaagaaaaagaaataattggaaacgggaatgcgaatcagacaggaggacta
tgtgtttctaaagatctgctccttacacctctccaaggcctggagtgggtgtacgtgcag
ctctgtgctgaaaggtaccagcatctccagcaagtggcccacagcatggaggctggaggt
ggctag

>gi568815585f:97176236_97466553|GENSCAN_predicted_peptide_3|359_aa
MEDLEDLKQNTRIRHYHSWRSYQAMHQFQRMMSLDNDSIIHASYSSIPTDPSLTVLKLSI
KQRTGGGKKKKRNKPYISRGLGMFLCSTWGRGQVSDTTLCPAKSQVQGQDYILGRRRQDL
PPFPILTWFQEALIYDTVNSMILCHRSKGNERGYEAHTPVPSKPPFWYLSTQENKEAARV
ARIVGNSSFVIAYLCSRCLLSRGVSTNGFNYGFNTGHDDFSMKAAVLTITTSLELGGTTW
ILNSGSGATGNRAPGTIHPGGSAGLHQGGVRPEKKLCPAPCCFLPAQPEALQKTCADRPD
MWQELSSSIVQSGPSCGFHKRLKFQPYKGIRGRKRSSEVEGDLKEEEHKTRSGAKGSQH

>gi568815585f:97176236_97466553|GENSCAN_predicted_CDS_3|1080_bp
atggaagatttggaggacttaaaacagaacactcgtataaggcattatcattcctggagg
tcttaccaagccatgcaccaatttcagaggatgatgtcattggacaacgactccataata
catgccagttatagtagcatccccacagatccaagcttaactgttctcaaactgtcaatc
aagcaacgtacaggaggggggaaaaaaaaaaaaaggaacaaaccctacatttctcgggga
ctggggatgtttctgtgttccacatggggccgaggacaagtctcagacaccactctgtgc
cctgcaaaatcacaagttcagggtcaggattatattttgggtagaagacggcaggatctg
ccaccatttcccattctcacctggtttcaggaagccttaatctatgacacagtgaatagc
atgatcctttgtcacagatccaaaggcaatgagagaggttatgaggcccatacacctgtt
ccaagcaaaccaccattctggtacttgagtacccaggagaacaaagaagcagctagagta
gcacgcattgtgggaaattcatcctttgtcattgcctatctctgttcacgctgccttctt
tcacgaggtgtgagcaccaatggcttcaactacggcttcaacacaggacatgatgatttt
tctatgaaagcagctgttctcaccatcacaaccagccttgaacttggtggcacaacctgg
atcctaaatagtggctctggagcaactgggaatagggccccggggaccatccacccaggt
ggcagcgctgggctgcaccaagggggagtcaggccagaaaaaaagctttgccctgctccc
tgctgctttttgccagcccagccagaagccctgcagaaaacctgtgctgaccggcccgac
atgtggcaggaactatccagttctattgtacaatctgggccaagctgtgggttccacaaa
aggctcaagttccagccctacaaaggaatcagaggaagaaagagaagctcagaggtggaa
ggagacctgaaggaggaggagcacaaaacaagaagtggagccaaggggagtcaacactga

>gi568815585f:97176236_97466553|GENSCAN_predicted_peptide_4|143_aa
MEAQPQRGNETLISHSQDPQKVGSEGCSLARQQEMKPGQLQSCSLYRLSQIRAVLPAAKV
VLGPSSQCLKCGKSLVGSYRRWQGKRKAGNLKWPRRHNFSERALIYSEMNGYAVSIYPWP
VESRGRKRVLPNFKGQGLGDGTI

>gi568815585f:97176236_97466553|GENSCAN_predicted_CDS_4|432_bp
atggaggcccagcctcagcgaggaaacgagacactcatttcacactcacaggacccacag
aaggtgggaagtgagggatgcagcctggctagacagcaggaaatgaaaccagggcagctt
cagtcctgcagcctttatcgtctcagtcaaatcagagctgttttacctgctgcaaaagtg
gtgctggggccttccagccagtgcctgaagtgtgggaaatctttggtgggcagttacaga
agatggcagggaaagagaaaggcagggaatctcaagtggcccaggaggcacaacttcagc
gaaagagcgttaatttattctgagatgaatggttatgctgtctccatctacccttggcca
gtggaaagcagaggcagaaaaagggtgctgccaaatttcaaaggtcaaggtcttggagat
gggacaatttaa

>gi568815585f:97176236_97466553|GENSCAN_predicted_peptide_5|95_aa
MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKIV
GKYNTFKGHAPSEAPGVGEVGGEGWKPVLASFGFW

>gi568815585f:97176236_97466553|GENSCAN_predicted_CDS_5|288_bp
atggctttgaacgttgccccagtcagagatacaaaatggctgacattagaagtctgcaga
cagtttcaaagaggaacatgctcacgctctgatgaagaatgcaaatttgctcatcccccc
aaaagttgtcaggttgaaaatggaagagtaattgcctgctttgattccctaaagattgta
gggaagtataatacctttaagggccacgctccctctgaagcccctggggttggggaagtt
gggggagaggggtggaaaccagttcttgcctctttcggcttttggtag

>gi568815585f:97176236_97466553|GENSCAN_predicted_peptide_6|139_aa
MLKVKKKMKRKAMLQESRRPTAAARDKQSLMPCIPLVLFRHKQKNKTSPSFPTLIGHMET
LPGTYHTVRQLADTHLDASPDYQQFEGSSVVFTAEPSMSKTEPHADWPSHKTDQSLSSLY
SNLSAEHNIQTPTQFLSYS

>gi568815585f:97176236_97466553|GENSCAN_predicted_CDS_6|420_bp
atgttgaaggtgaaaaagaagatgaagagaaaggcaatgttgcaagagagcagaaggccc
actgcagctgcaagggacaagcaatccttaatgccgtgtattcctctagtacttttccgg
cacaaacagaagaataaaacttccccatcattccctactttaataggacacatggagacc
cttcctggtacttatcatactgtacggcagttggctgatactcatcttgatgcctctcct
gactatcagcaatttgaaggcagtagtgttgtcttcactgctgaaccctctatgtcaaag
acagaacctcatgctgactggccttcccataagacagatcagagcctgtcatccctgtac
tcaaatcttagtgctgagcataacattcaaacacctacacagtttctgtcttactcatga

>gi568815585f:97176236_97466553|GENSCAN_predicted_peptide_7|532_aa
MEKGHQRWACGGEVRGQSVQKEPMSIGAEAEKCGCVWNLRVAWLDCSIKNHGHEKKAGLG
LERKLTLWQCGRPCSWVRMWKALLVGEDVEGLTRGYVLEKHAAAGILRKISRYLLRVDHS
EEKPWMGTLRKVPAKMTPPVSRGRCSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAM
LAQQMQFMFPGTPLHPVASVQSSQEPALPRVKEMPGAEGSKINKIQCFGDRQTQEKGKQE
GTVYEPGSWSSSDIKSAGTLIWGVPASKTVRNSIQLFPTFPVGPAIGTNTAISFAPYLAP
VTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLEVCREFQRGNCARGETD
CRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHLQAKIKAAQHQANQAAV
AAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLHYQQALTSAQLQQHAAF
IPTGSAKLTWFPPYNLLQYWPKSQTIRNEESWVPLNSQRLDITDEEHLTLLV

>gi568815585f:97176236_97466553|GENSCAN_predicted_CDS_7|1599_bp
atggagaaagggcatcagagatgggcctgtgggggtgaagtaagagggcagtctgtgcag
aaagagcccatgagcataggcgcagaggcagaaaagtgtgggtgtgtttggaatctgaga
gtagcatggttggactgcagcataaaaaaccatgggcatgaaaagaaagcagggcttgga
ctggaaaggaagctcactctctggcaatgtggaaggccttgctcatgggtgaggatgtgg
aaggccttgctcgtgggtgaggatgtggaaggccttactcgtgggtacgtactggagaaa
catgcagcagcaggaattctgagaaaaattagcaggtatctactgagggtggaccacagt
gaagaaaaaccctggatggggaccctcagaaaggtgccagcgaagatgaccccacccgtg
tcacggggccgttgttcgagagagaactgcaagtatcttcaccctccgacacacttaaaa
actcaactagaaattaatggaaggaacaatttgattcagcaaaaaactgcagcagcaatg
cttgcccagcagatgcaatttatgtttccaggaacaccacttcatccagtggcttctgta
cagagtagccaggaaccagctctgcccagagtaaaagaaatgccaggtgcagagggctcc
aagataaataagatacagtgttttggggatagacagacacaagaaaagggcaaacaagaa
ggcactgtctatgaaccagggagctggtcctcatcagacatcaaatctgcgggcaccttg
atttggggggttccagcttccaaaactgtgagaaattcaattcagttgtttcccactttc
cctgtaggtcccgcgatagggacaaatacggctattagctttgctccttacctagcacct
gtaacccctggagttgggttggtcccaacggaaattctgcccaccacgcctgttattgtt
cccggaagtccaccggtcactgtcccgggctcaactgcaactcagaaacttctcaggact
gacaaactggaggtatgcagggagttccagcgaggaaactgtgcccggggagagaccgac
tgccgctttgcacaccccgcagacagcaccatgatcgacacaagtgacaacaccgtaacc
gtttgtatggattacataaaggggcgttgcatgagggagaaatgcaaatattttcaccct
cctgcacacttgcaggccaaaatcaaagctgcgcagcaccaagccaaccaagctgcggtg
gccgcccaggcagccgcggccgcggccacagtcatggcctttccccctggtgctcttcat
cctttaccaaagagacaagcacttgaaaaaagcaatggtaccagcgcggtctttaacccc
agcgtcttgcactaccagcaggctctcaccagcgcacagttgcagcaacacgccgcgttc
attccaacaggttctgccaaactcacttggttcccaccttacaatctgctccaatactgg
cctaagagccaaaccatccggaatgaagagtcatgggtgccgctgaactcacaaaggctg
gatataactgatgaggagcatttaactctgttggtttaa

>gi568815585f:97176236_97466553|GENSCAN_predicted_peptide_8|370_aa
MEKMTCIILTGLHNVQSACTNQHEFGDVTLLIGEGIPSRAWGRSEIGRRDTEVPKSMAVP
HGACFRGCLEEPLQYPLYSLSLDGFLSWHQPTLQATSWQAAVVQRKNQKEYWRGISGGLS
VPPVRFVPFRALVPHLACITLAPLQCGKQSPGGFNIMACGKQMAGAWSGQQTQSSLTLGV
TASSNVTPEECQKGLRDQSKCQCVFDVWQHLMCLSSDLETWTICIDSTPEGTLSFKQKPV
VGGRSTVSITILLENPSVAKSGPNPLTWHQGTTQSIRIKPTLQPLPQTDALINLNGSYSP
AELDTSPAFFVDLHLSFFLFNDGALRNVQSPCRIQRTGKVLLAGGGGERCSGKDSEYKLY
FNCAFKNVIK

>gi568815585f:97176236_97466553|GENSCAN_predicted_CDS_8|1113_bp
atggaaaagatgacgtgcataattttaactggcttgcacaatgtacaaagtgcttgcaca
aaccagcatgagtttggagatgtcactctgctcattggtgaaggcatcccctccagggca
tggggacggtctgagatagggcgacgggacacagaggttccaaagagcatggctgtgcct
catggagcctgcttcagagggtgcttagaagaacccctgcaatatccactatattcacta
agtctggatggcttcctgagctggcatcagccaacgctacaggcaacatcatggcaggca
gcagtggtgcaaaggaaaaatcaaaaagagtactggaggggaatttcaggaggcttgtct
gtgccaccagtcagatttgtgccctttcgagccttagttcctcacttggcttgtatcacg
ctggcacctctgcagtgcgggaaacagagtcccggtgggtttaacataatggcgtgtgga
aagcagatggctggtgcatggagtggtcagcagacccagtccagtctgaccttgggagtc
actgcctccagcaatgtcaccccagaggaatgccagaaggggctgagagaccagagcaaa
tgccagtgtgtctttgacgtgtggcagcatcttatgtgtttgagctctgatttggagaca
tggacaatatgcattgactctacacctgaggggactctttcctttaagcagaagcctgtg
gttggaggtaggagtactgtttccatcactattctgcttgaaaatccttcagtggccaag
tcagggccgaaccctttaacttggcatcaaggtaccacacaatcaatcagaatcaaacct
acgctgcagccgctcccacaaacggatgctctgatcaatctgaatgggagttattctcca
gctgaacttgatacttccccagctttctttgtagacttgcatttgtctttctttctattt
aatgatggtgccttaaggaatgtgcaaagtccttgtagaattcagaggacagggaaagta
cttcttgctgggggaggaggagagagatgttcagggaaagattcggagtataaattgtat
tttaattgtgcctttaagaatgtgattaagtaa

>gi568815585f:97176236_97466553|GENSCAN_predicted_peptide_9|76_aa
MGLYSTKSLVGPLMEMPSCSTCDFQSYFLPSTNEDKKIEHLASAVMMMNPVRISLEMRMK
VQGAGVPARTSPTQDT

>gi568815585f:97176236_97466553|GENSCAN_predicted_CDS_9|231_bp
atggggctctactccaccaagtcacttgtgggcccactgatggagatgccatcctgttca
acttgtgacttccaaagttattttttaccatctacaaatgaggacaagaagattgaacac
ttagcgagtgctgtcatgatgatgaatcctgtgagaatttcactggagatgaggatgaaa
gtacaaggagctggggtccccgctagaacatcaccaactcaggacacttag

>gi568815585f:97176236_97466553|GENSCAN_predicted_peptide_10|456_aa
MTLSHTLSPEEEHMQDCKSRIPAVLLNHTKQKLTKTQIKASSVPARAQPYSDCLVSSLIP
REPAIQNCKGKQIQENPTQVSECLYTNHILTEATVKILNCIRSLTGQETIVCSPYTCQQR
FTGRMPRRRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGS
RALVGLAEASVTRQLTYDWLAERARRAPPGKALGAGCCYEESRAFRLPFGIPLSRFSTHP
WLTGRGKSSTSVRHRKGRVYVAGGGGGGGRGGTMREYKVVVLGSGGVGKSALTVQFVTGT
FIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQ
QSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSSEGRALAEEWGCPFMETSA
KSKTMVDELFAEIVRQMNYAAQPDKDDPCCSACNIQ

>gi568815585f:97176236_97466553|GENSCAN_predicted_CDS_10|1371_bp
atgacactgagtcacactttgagtcctgaagaagagcacatgcaggactgcaagagtaga
attccagctgtcttactaaaccacactaaacaaaaacttactaaaactcagatcaaggcc
tcatcagtccctgccagagcacagccttactctgactgcctggtgtcatcactgatccca
agagaaccagccatccaaaactgcaaaggaaaacaaatccaggaaaaccctacacaggtc
agtgaatgcctctacaccaatcacatcttgactgaagctaccgtgaagattctcaactgt
attaggagcctcacaggtcaagaaaccatcgtctgctctccttatacttgccagcagcgt
ttcacaggcagaatgccacggaggcgacgtgaaaagtggaattcatcattctggcttgca
acgcatcttgttcttttgccagaacagggcacagcaactggctcctcaatctctgcccct
cccaaaccccagcagccggtccctgtctccatcccgccggcctcggtggcaaggggctcg
cgagctctggttggcttggccgaagcttccgtcactcgccagctcacctacgattggttg
gcagagcgtgcgcgaagagccccgcctggcaaggcactgggagctggctgttgctatgag
gagtccagggccttccggctgccgttcgggattccgctctccaggttttcaactcacccg
tggctgacagggcgtgggaagagctcgacttcagttcggcaccgaaaggggcgggtctat
gtcgcgggcggcggcggcggcggcggccgcggagggacgatgcgcgagtacaaagtggtg
gtgctgggctcgggcggggtaggcaaatccgccctgaccgtgcagttcgtgaccggcacc
ttcatcgagaaatacgaccccaccatcgaggacttctaccgcaaggagatcgaggtggat
tcgtcgccgtcggtgctggagatcctggacacggcgggcaccgagcagttcgcgtccatg
cgggacctgtacatcaagaacggccagggcttcatcctcgtctacagcctcgtcaaccag
cagagcttccaggacatcaagcccatgcgggaccagatcatccgcgtgaagcggtatgag
aaagtgccagtcatcttggttgggaacaaagtggacctggaaagtgagagagaagtatcg
tccagcgaaggcagagcccttgctgaagagtggggctgcccctttatggaaacttccgct
aagagtaaaacaatggtggacgaactctttgcagaaattgtgaggcagatgaactatgct
gctcagcctgacaaagatgacccatgctgttctgcatgtaacatacaatag