GENSCAN 1.0	Date run:  6-Nov-116	Time: 05:19:57

Sequence gi568815585f:75449821_75705809 : 255989 bp : 39.15% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    351    346    6                               1.05
 1.03 Term -   2952   2785  168  0  0   68   38    87 0.028  -1.40
 1.02 Intr -  14990  14940   51  2  0   83   78    37 0.183   0.39
 1.01 Init -  31773  31087  687  0  0   54   25   406 0.138  24.02
 1.00 Prom -  51791  51752   40                              -5.55

 2.04 PlyA -  52049  52044    6                               1.05
 2.03 Term -  57777  57272  506  1  2    2   45   192 0.300  -0.08
 2.02 Intr -  58738  58661   78  2  0   72   46   136 0.208   6.40
 2.01 Init -  62752  62680   73  1  1   62   65    83 0.565   4.68
 2.00 Prom -  65647  65608   40                              -5.95

 3.00 Prom +  66887  66926   40                              -8.15
 3.01 Init +  70632  70766  135  2  0   73   86   117 0.853  10.19
 3.02 Intr +  75435  75538  104  2  2   66  100    23 0.004  -0.65
 3.03 Intr +  85575  85685  111  0  0    3   53   157 0.023   2.28
 3.04 Term +  87932  88091  160  2  1  102   43   210 0.676  14.33
 3.05 PlyA +  88868  88873    6                               1.05

 4.03 PlyA -  90670  90665    6                               1.05
 4.02 Term -  91857  91707  151  2  1   98   54    84 0.201   2.40
 4.01 Init - 100002  99503  500  0  2   80    5   384 0.195  21.88
 4.00 Prom - 110815 110776   40                              -5.35

 5.00 Prom + 113080 113119   40                              -3.25
 5.01 Init + 113664 113666    3  2  0   81   64     0 0.522  -3.05
 5.02 Intr + 116875 117031  157  0  1   61   27   128 0.904   2.66
 5.03 Term + 117407 117516  110  0  2   79   39   136 0.906   5.49
 5.04 PlyA + 118042 118047    6                               1.05

 6.00 Prom + 128935 128974   40                              -4.35
 6.01 Init + 135001 135240  240  0  0   44   27   148 0.308   2.22
 6.02 Intr + 140142 140309  168  2  0   71   81    37 0.245   0.52
 6.03 Intr + 145095 145207  113  2  2  103   54    24 0.326  -1.24
 6.04 Intr + 150293 150471  179  2  2   40   34   171 0.136   5.54
 6.05 Intr + 154949 155007   59  0  2  101   77    30 0.296   0.88
 6.06 Term + 155909 155992   84  1  0  122   33   161 0.993  10.67
 6.07 PlyA + 157286 157291    6                               1.05

 7.04 PlyA - 159117 159112    6                               1.05
 7.03 Term - 160901 160887   15  2  0  124   47     4 0.337  -2.84
 7.02 Intr - 167151 166894  258  0  0   42   80   184 0.253   9.74
 7.01 Init - 186263 186009  255  2  0   59   99   176 0.608  11.08
 7.00 Prom - 190458 190419   40                              -5.25

 8.02 PlyA - 190838 190833    6                               1.05
 8.01 Sngl - 210867 210559  309  0  0   91   37   218 0.999  12.65
 8.00 Prom - 213195 213156   40                              -3.75

 9.03 PlyA - 215055 215050    6                               1.05
 9.02 Term - 221372 221220  153  2  0  -15   41   181 0.212   0.04
 9.01 Init - 231418 231245  174  1  0   81   20   155 0.396   7.39
 9.00 Prom - 232043 232004   40                              -3.45

10.00 Prom + 240871 240910   40                              -5.85
10.01 Init + 247275 247355   81  2  0   90   29    74 0.161   2.72
10.02 Term + 254726 254953  228  1  0   81   43   222 0.963  12.65
10.03 PlyA + 255013 255018    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  75857  75699  159  2  0  101   39   108 0.913   4.16


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:75449821_75705809|GENSCAN_predicted_peptide_1|301_aa
MAEIRRRSQKPEAGGCGAPAAREVILVLSAPFLRCVPAPGAGASGGTSPSATQPNPAVFI
FEHKAQHISRFIHNSHDLTYFAYLIKAQPDDPESQMACHVFRATDPSQARQGLGGAGAGS
ALGDRGAGREGRGPHFKDRLRFGCRRARSTWRAQAPAGPFPGPWEWERRRSGAGRAAGAA
GRLQQGPGGKRTTVPGWRGSWRVQGARVEERPSREDGGVWGVTGDGLLAPVGYRKDLPRN
PGPSQFIITSLLRITHISGIEAFYDLIPYSSTFTSFFVENHLRQFVKTSVEWLCNGMWVN
V

>gi568815585f:75449821_75705809|GENSCAN_predicted_CDS_1|906_bp
atggccgagatccgcaggcgcagccagaagcccgaggcgggcggctgcggggcgccggcg
gcccgagaggtgatcctggtgctcagcgcgcccttcctgcgttgcgtccccgcgccgggc
gctggggcctcggggggcactagtccgtcggccacgcagcccaacccggcggtattcatc
ttcgagcacaaggcgcagcatatctcgcgcttcatccacaacagccacgacctcacctac
tttgcctacctgatcaaggcgcagcccgacgaccccgagtcgcagatggcctgccacgtt
ttccgcgccacagaccccagccaggcaagacaggggctcggaggcgcgggggcgggctcg
gccttgggggatcggggagcagggcgggaggggcggggaccccactttaaggaccgactg
aggtttggctgcaggcgcgcgcgctccacgtggcgcgctcaagcgccggctggccccttc
cctggaccttgggagtgggagagaaggcgttcgggggctgggcgagcggcgggagcggcc
ggccggctacagcagggacccggagggaaaaggacaacggtcccgggatggagggggagc
tggcgcgtccaaggagcacgcgtggaggagcgcccgtcccgggaggacggcggtgtctgg
ggtgtgaccggagatggcttgcttgccccagtaggctacaggaaagatttgcccaggaat
ccaggcccaagccagtttataattacttcactcctccgtatcactcatatatcagggatt
gaagccttttatgatttaataccgtatagttcaactttcaccagtttctttgttgaaaat
cacttacggcaatttgtaaaaacttctgtggaatggttatgcaatggaatgtgggttaat
gtttag

>gi568815585f:75449821_75705809|GENSCAN_predicted_peptide_2|218_aa
MQARCSRLHQKNVSVQQAQVHLTAVFASVPMMAAAAVWSGRCEDAGCSVGAPTACHIVGD
EKETRREELWPFRDPRPRGSPSQSCDTLFGSLQSLLSPSFWMPPHPPCPDAGAHSRNCVQ
CIWPNCSLAWSQHLCQHLELPAPTQQLACLAVCSGWTLHLLTHTPLAAPRLAHPGQVWDP
SQKCEPIIACWAEWVERAQRVQVILRQEALPAKEVSSW

>gi568815585f:75449821_75705809|GENSCAN_predicted_CDS_2|657_bp
atgcaagccagatgcagccgtcttcaccagaaaaatgtatctgtccagcaggcccaagta
catctgacagctgtttttgccagtgtcccaatgatggcagcagcagctgtctggagtggc
cgctgcgaagatgctggctgcagcgtgggagcccccaccgcttgccacattgtgggtgat
gagaaggagacaaggagagaagagctgtggcccttccgggatcccagacctaggggctca
ccaagccagagctgtgacaccctctttgggtctctgcagtccctgctgtctccaagcttc
tggatgccaccacatcccccttgtccagatgcgggtgcccacagcagaaactgtgtgcag
tgtatctggcccaactgcagccttgcttggagccagcacctgtgccagcatctggagctg
cctgccccaacacagcagctggcatgcctggctgtgtgcagtggctggaccctgcatttg
ctcacccacacaccccttgctgctccacgcctggctcaccctgggcaggtgtgggatcca
agccagaagtgtgagccgatcatagcctgctgggctgagtgggtggaacgggcccagcgg
gtgcaagtaatactcaggcaagaggcactgccagccaaagaagtttccagctggtga

>gi568815585f:75449821_75705809|GENSCAN_predicted_peptide_3|169_aa
MRENLELPRDLLKCCNQNGDSNMDNEVQVEEVLDEMRNLLETGAKCLSQGLTLGLFAYCL
KPRNATLQTGKGKEEGVNPKPPGEAQSLRKLEDPVTRLLRYSRKENGGLDPGGSKRRLEL
TSDLASSGGSLDASMGSVWDLRPGLERTPPDQRFRFHVLPLAAWRMGRT

>gi568815585f:75449821_75705809|GENSCAN_predicted_CDS_3|510_bp
atgagggaaaatttggaacttcctagagatttgttaaaatgttgtaaccaaaatggtgat
agtaatatggacaatgaagtccaggttgaggaggtcttggatgagatgaggaacttactg
gaaactggagcaaagtgtttgagccagggcctaactttgggtctttttgcatattgcctt
aaacctagaaatgctaccctgcaaacagggaaggggaaagaggaaggtgttaatccgaaa
ccgccaggtgaggcacaaagtttaaggaagttggaagaccctgttacaaggctactgcgg
tattccaggaaagagaatggcggcttggacccaggtggcagcaagaggaggttggaactc
acatcggacttagcatccagcggcggctcgctggacgcctccatgggcagcgtctgggac
ttgcggcccggactcgagagaacgcccccagaccagcgcttccgcttccacgtcctgccc
ctagcggcctggcgcatggggcggacgtag

>gi568815585f:75449821_75705809|GENSCAN_predicted_peptide_4|216_aa
MAAVPGPPALTAAAFAAAAASAHARLDLGPPNTPPGGGAPKHQKEFDGPLTLLTAPCRAV
GQVSYFKLRCCRGEKNKPISYFGRKTVSESTALSPHAWTLPSRALPSARVLRMRLAPVWD
RVVTRTFPFLQCQPTALGGVPRSPILRQTPGGYPLPGSKAGGRRAARAWLFTPFTSSDST
NHTTLRLMNTAGNMGKNSNTSLQTRIGPSRSTRVLL

>gi568815585f:75449821_75705809|GENSCAN_predicted_CDS_4|651_bp
atggccgcggtgcccggccctccagctctgacagccgccgccttcgccgccgccgccgct
tccgcccacgcgcgccttgacctgggccctcccaacacaccgcccggaggaggagcgcct
aaacaccaaaaagagtttgacgggcctctcaccctcttaaccgctccgtgcagggccgta
ggtcaagtgtcatattttaaattaagatgctgccgaggagaaaaaaataagccaatttcc
tatttcgggagaaaaacagtatctgaatccacagccctctcccctcacgcttggactctt
ccgagccgagccttgccgagcgctcgcgttctacgcatgcgccttgcgccggtctgggac
cgcgtggtcacccgcaccttcccattcttgcagtgtcaaccgactgcgctaggaggcgtg
ccgcggagtcctattctgagacagacgccaggtggctacccattgccaggcagcaaggcc
ggaggacgccgtgcagcacgagcatggcttttcaccccttttacttccagtgactctacc
aatcacacaactctacgccttatgaacacagcaggcaacatgggcaaaaatagtaacaca
tcactccagacccgtattggtccaagcagatcaactagagtccttctctga

>gi568815585f:75449821_75705809|GENSCAN_predicted_peptide_5|89_aa
MYEVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLK
KFLEESVSMSPEERARYLENYDVGTFFPF

>gi568815585f:75449821_75705809|GENSCAN_predicted_CDS_5|270_bp
atgtatgaagtattcagaacagaagaggaagaaaaaataaaatctcagggacaagatgtt
acatcatcagtatatttcatgaagcaaacaatcagcaatgcctgtggaacaattggactg
attcatgctattgcaaacaataaagacaagatgcactttgaatctggatcaaccttgaaa
aaattcctggaggaatctgtgtcaatgagccctgaagaacgagccagatacctggagaac
tatgatgtcggtaccttctttccgttttga

>gi568815585f:75449821_75705809|GENSCAN_predicted_peptide_6|280_aa
MPLTDSPVDSTKLRKESVNVKINHWKLPKLTHKGEKNSGKEGEKPHKTNSASNSCGTISS
DVICENGIPEGEERWKDMMGPHSSHCRTKASSLCHHASLPWVKRNHVGPAKATSPSLRLR
RWRPFLRLPSLGLHSVAPSIDEKVDLHFIALVHVDGHLYELGKNYFNLSWGEKCSVKAER
GEEATEERSEASSWFMRFKERSHLHNIKVHGEAAYADGEAASYPEDQAQIFREDGRKPFP
INHGETSDETLLEDAIEVCKKFMERDPDELRFNAIALSAA

>gi568815585f:75449821_75705809|GENSCAN_predicted_CDS_6|843_bp
atgccattaacagattcaccagtagactcaacaaagttgagaaaagaatcggtgaatgtg
aagataaatcactggaaattacccaaacttactcacaaaggggaaaaaaatagtggaaaa
gagggggaaaaaccacacaaaacaaacagtgcatccaacagctgtgggacaatttcaagt
gatgtaatatgtgaaaatggaatcccagaaggagaagagagatggaaagatatgatgggg
cctcattctagccactgcagaacgaaggcctcatcattgtgtcaccatgcatccctgccc
tgggtcaaacgtaaccatgtaggccctgcaaaggctaccagtccatctctccgtcttcgt
cgctggcgacccttcttacgtctaccatctttgggtctccattctgttgcaccaagtata
gatgagaaagtagatcttcattttattgcattagttcatgtagatgggcatctctatgaa
ttaggtaagaactattttaatttgtcctggggagagaaatgttctgttaaggctgagaga
ggtgaggaagctacagaagaaaggtctgaagctagcagttggttcatgaggtttaaggaa
agaagtcatctccataacataaaagtgcatggtgaagcagcatatgctgatggagaagct
gcaagttatccagaagatcaagctcagatcttccgtgaagatgggcggaagccatttcca
attaaccatggtgaaactagtgatgaaactttattagaggatgccatagaagtttgcaag
aagtttatggagcgcgaccctgatgaactaagatttaatgcgattgctctttctgcagca
tag

>gi568815585f:75449821_75705809|GENSCAN_predicted_peptide_7|175_aa
MRPRARILPAPARLAPALSRAPESGAPPGSRPPGPLDIPEIAAHNCTFPGQETSPAGERG
PPPSPEPRPAEPATRSPAAIRPSRQTPMNIHKHQENPGKHDFTKPNEAPGTKPGRTEICD
LSDREFKIAVLRKLKEIQDNTQKEFRILSDKFNKEIEIIKKNQAEILEWGQVNSQ

>gi568815585f:75449821_75705809|GENSCAN_predicted_CDS_7|528_bp
atgcgcccccgcgcccgcatccttcccgcacccgcccgcctggcccctgccctctcccgg
gcccctgagagcggcgcccctcccggctcgcggccgcccggcccgcttgacataccagaa
atagctgcacacaattgtacctttcccggccaagaaacctcccccgctggggagcgcggc
ccgccgccctcacctgagccccggccagctgagcccgctacccgctctcccgccgcgatc
cggcccagccgccagacaccaatgaacatccacaagcatcaagagaatccaggaaaacat
gacttcactaaaccaaatgaggcaccagggaccaagcctggaaggactgagatatgtgac
ctttcagatagagaattcaaaatagccgttttaaggaaactcaaagaaattcaagataac
acacagaaggaattcagaatcctatcagataaatttaacaaggaaattgaaataattaaa
aagaatcaagcagaaattctggagtggggccaggtgaactctcagtaa

>gi568815585f:75449821_75705809|GENSCAN_predicted_peptide_8|102_aa
MKPQASGKQKNLKESRNNKDPVKREKQDAVSSPGIVTLYTEEEALHPISQPIKKLENASV
KTKKQEGGFKEKGINDGMEMPFPANISKKGKLIQNWFFEMIT

>gi568815585f:75449821_75705809|GENSCAN_predicted_CDS_8|309_bp
atgaagccccaagcctctggtaagcagaagaatctgaaagaaagcagaaataacaaagac
cccgtgaagagagaaaagcaagatgcagtgagctctcctggtatagtaacactgtacact
gaagaagaagcactgcaccccatcagccagccaatcaagaagttggaaaatgcaagtgtg
aaaaccaagaaacaagaaggaggatttaaagagaagggcataaatgatggaatggagatg
ccattccctgcaaacatatcaaaaaaaggcaaattaatccaaaattggttctttgaaatg
atcacttag

>gi568815585f:75449821_75705809|GENSCAN_predicted_peptide_9|108_aa
MGKDFMAKTSKAIATKVRIGKWDLIKLKRFCTAKEAIIRVNRQPTEWEKSSAIIHLTKCQ
ASPSGGIPEEGIGVIGDDSFMCAIAPEGLPVGQDVEVEDSDIDDPNPG

>gi568815585f:75449821_75705809|GENSCAN_predicted_CDS_9|327_bp
atgggcaaagatttcatggcaaaaacatcgaaagcaattgcaacaaaagtaagaattggc
aaatgggatctaattaaactaaagcgcttctgcacagcaaaagaagctatcatcagagtg
aacagacaacctacagaatgggagaaaagttctgcaattatccatctgacaaagtgtcag
gccagtccctcaggaggtattccagaagaaggcattggtgtcataggagacgacagcttc
atgtgtgctattgcccctgagggccttccagtgggacaagacgtggaggtagaagacagt
gatatcgatgatcctaaccctgggtag

>gi568815585f:75449821_75705809|GENSCAN_predicted_peptide_10|102_aa
MNANTHSDWHEEKVEAERASHTLEGGRGFAHKYGGECFWDSRHLLNGCLKEIEKVKREKC
LLTRISGHFADNQSGMKWSSRSSQNVWDLSHVDYAIRTGTER

>gi568815585f:75449821_75705809|GENSCAN_predicted_CDS_10|309_bp
atgaatgccaatacacattcagattggcatgaggagaaggtggaagcagagagagctagc
cacactctggaaggaggtcgggggtttgcacacaaatatggtggagagtgcttttgggat
tctaggcaccttttaaatggctgcttaaaagaaattgaaaaagttaaacgagagaagtgc
ctgctgactcgcattagtgggcattttgctgataaccagtctggtatgaagtggtcttca
agaagctcccagaatgtttgggatttaagtcatgtggattatgcgatcagaactggaact
gagcgatag