GENSCAN 1.0	Date run:  6-Nov-116	Time: 14:35:30

Sequence gi568815585f:72628941_72855213 : 226273 bp : 37.47% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5024   5095   72  1  0   41  106    83 0.694   6.52
 1.02 Intr +  26400  26435   36  2  0  127   71    15 0.249   1.24
 1.03 Intr +  51334  51424   91  0  1   44  100    67 0.161   2.15
 1.04 Intr +  54020  54159  140  0  2   54   64    81 0.470   1.56
 1.05 Term +  61614  61715  102  2  0  126   43   134 0.986  10.00
 1.06 PlyA +  62299  62304    6                              -0.45

 2.00 Prom +  63150  63189   40                              -4.95
 2.01 Sngl +  63941  64303  363  1  0   55   41   217 0.614   9.53
 2.02 PlyA +  66993  66998    6                               1.05

 3.00 Prom +  73357  73396   40                              -4.05
 3.01 Sngl +  74817  75041  225  2  0   97   47   125 0.607   4.19
 3.02 PlyA +  75212  75217    6                               1.05

 4.05 PlyA -  76570  76565    6                               1.05
 4.04 Term -  86157  85992  166  2  1   79   50    99 0.426   1.61
 4.03 Intr -  86739  86612  128  0  2   53   62   103 0.639   2.76
 4.02 Intr -  90157  90012  146  2  2  100   53   124 0.636   9.18
 4.01 Init -  98662  98584   79  1  1   92  113   179 0.994  20.07
 4.00 Prom -  99757  99718   40                             -10.45

 5.00 Prom +  99820  99859   40                             -10.94
 5.01 Init + 100001 100153  153  1  0   34  100    80 0.040   3.83
 5.02 Intr + 102341 102447  107  1  2   57  123    81 0.924   6.59
 5.03 Intr + 106020 106065   46  0  1   71   78    57 0.612   0.49
 5.04 Intr + 109022 109103   82  1  1   60   82    52 0.100   0.09
 5.05 Intr + 116041 116267  227  2  2   46   89    97 0.372   2.38
 5.06 Intr + 117004 117136  133  0  1   64   91    42 0.836   1.40
 5.07 Intr + 117561 118171  611  1  2  109  110   519 0.958  47.41
 5.08 Intr + 124750 124881  132  0  0   97  102    61 0.474   8.32
 5.09 Term + 126103 126129   27  0  0   74   39    22 0.198  -7.00
 5.10 PlyA + 126361 126366    6                              -0.45

 6.19 PlyA - 126482 126477    6                               1.05
 6.18 Term - 127995 127633  363  0  0   61   55   176 0.520   5.18
 6.17 Intr - 131711 131589  123  2  0    9  110    72 0.576   1.36
 6.16 Intr - 132581 132423  159  2  0   62   80    84 0.938   4.26
 6.15 Intr - 132874 132706  169  0  1   81   68   153 0.991  11.63
 6.14 Intr - 133197 132983  215  0  2  112   63   107 0.999   7.19
 6.13 Intr - 134667 134511  157  2  1   85   86   109 0.999   9.49
 6.12 Intr - 137118 137032   87  2  0   84   58    93 0.941   4.07
 6.11 Intr - 139972 139845  128  1  2   81   38   162 0.997   9.06
 6.10 Intr - 142956 142855  102  0  0   76   94    75 0.987   6.35
 6.09 Intr - 143335 143219  117  1  0   91   51   104 0.991   6.74
 6.08 Intr - 143899 143753  147  1  0   66  115    76 0.992   7.61
 6.07 Intr - 144881 144744  138  2  0   30   75   128 0.977   5.44
 6.06 Intr - 145119 145006  114  0  0   62  105    21 0.650   0.92
 6.05 Intr - 146435 146271  165  2  0   79   60   237 0.931  19.24
 6.04 Intr - 148553 148480   74  0  2   63   63    61 0.885  -0.69
 6.03 Intr - 149440 149247  194  0  2   81   89   170 0.999  14.61
 6.02 Intr - 152063 151906  158  2  2   16   63   166 0.965   4.79
 6.01 Init - 152844 152665  180  0  0   84   96   173 0.925  15.00
 6.00 Prom - 153537 153498   40                             -10.55

 7.00 Prom + 154383 154422   40                              -9.25
 7.01 Init + 154530 154781  252  2  0   49  116   202 0.995  16.49
 7.02 Intr + 163507 163607  101  0  2   52  110    97 0.993   6.29
 7.03 Intr + 166419 166617  199  0  1   46   84   218 0.999  15.63
 7.04 Intr + 168967 169086  120  0  0   51   68   123 0.649   6.37
 7.05 Intr + 192909 193042  134  2  2   70  107   169 0.987  15.52
 7.06 Intr + 198070 198178  109  1  1   63   99    47 0.978   2.67
 7.07 Intr + 198793 198950  158  0  2   55    5   193 0.020   5.59
 7.08 Intr + 206303 206428  126  2  0   80   98   174 0.052  16.47
 7.09 Intr + 225117 225215   99  0  0   38  115   180 0.206  14.01

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  98903  99067  165  1  0   51   94   123 0.891   8.90
S.002 Intr +  99986 100153  168  1  0   72  100    72 0.910   6.02
S.003 Init - 154061 154043   19  2  1   78  102   -13 0.918  -0.67
S.004 Term + 198793 199005  213  0  0   55   37   200 0.921   7.85


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:72628941_72855213|GENSCAN_predicted_peptide_1|146_aa
MTAPNKELTIEQCNSGAKVEEKNWIKIYDGYSQKQKVLKIQLGKEMTVTKYFTDCLRKVI
RDDGGEGETPLLVSFRRSAFKLIPQGYLSSPRGPSSPRISLLHVDSSEHSESQALNRVDD
DTRIEEDNLPYPVRQFKCQPYLETLS

>gi568815585f:72628941_72855213|GENSCAN_predicted_CDS_1|441_bp
atgactgcccctaataaagaacttacaattgagcagtgcaactctggggcaaaggtagaa
gaaaagaattggataaaaatatatgatggttatagtcagaaacaaaaggttttaaaaatt
caacttggcaaggaaatgacagttactaaatatttcactgactgtctcaggaaagttatt
agagatgatggaggagaaggggagaccccactgttggtcagcttcagaagatctgctttc
aagctcattccccagggctacctcagttctccacgtggcccctcatctcccaggatctct
cttctccatgtggactcttcagagcatagtgagagccaggccctcaatagagtggatgat
gacacccgcattgaggaggacaatctaccttacccagtccgccaattcaaatgtcaacct
tatttggaaacactttcatag

>gi568815585f:72628941_72855213|GENSCAN_predicted_peptide_2|120_aa
MADKEKAFWGEEFKLAVKQVLATEICITKREPTANSQENGENVWKAFWRFKWQPLPSQAL
RSRRKEWFCGPDPGPHCPAQPWEIAPCILTPWLDLWLKVPGYSSGCCFRGCELFALTASM

>gi568815585f:72628941_72855213|GENSCAN_predicted_CDS_2|363_bp
atggcagataaagaaaaagctttctggggagaggaattcaagctggctgtgaagcaagta
cttgctacagaaatctgcataactaaaagagagccaactgctaatagccaagagaatggg
gaaaatgtctggaaggcattttggagatttaagtggcagcccctcccatcacaggccctg
aggtctaggaggaaagaatggttttgtgggccagacccagggcctcactgccctgcgcag
ccttgggaaattgctccctgcatcctgaccccttggctcgatttgtggctcaaagttccc
ggatacagctcaggctgctgcttcagagggtgtgagctcttcgccttgacggcttccatg
tga

>gi568815585f:72628941_72855213|GENSCAN_predicted_peptide_3|74_aa
MELSLWPRICEIYKKGDIVDIKGMVTLQVLPWRNWKSLQRYPAGCWQCCQQVKGKILAKR
TKNTLSTLRVETAS

>gi568815585f:72628941_72855213|GENSCAN_predicted_CDS_3|225_bp
atggagttgtccctttggccacgtatatgcgaaatctacaagaaaggtgatattgtagac
atcaagggaatggttactcttcaggtgttaccatggcgaaactggaagagtctacaacgt
tatccagcaggctgctggcagtgttgtcaacaagttaagggcaagattcttgccaagaga
actaagaacacattaagtactctaagagttgagacagcttcttga

>gi568815585f:72628941_72855213|GENSCAN_predicted_peptide_4|172_aa
MASSSGAGAAAAAAAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEAL
SSVIKELRKATEALKRVQHQEDGAKPFMRDEFSQLPPGPTSNIGDYNGDYNIGNYISRVK
PPWLLSWAGIVECLQLFKAQGTSCQWIYHSGVGERWPSSHSSIRQFPSEDIV

>gi568815585f:72628941_72855213|GENSCAN_predicted_CDS_4|519_bp
atggcgagtagcagcggtgctggggcggcggcggcggccgcggcggcgaatctgaatgcg
gtgcgggagaccatggacgttctgcttgagatttcaagaattttgaatactggcttagat
atggaaactctgtctatttgtgtacggctttgtgaacaaggaattaacccagaagcttta
tcatcggttattaaggagcttcgcaaggctactgaagcactgaagcgagtacagcaccaa
gaggatggtgctaaaccattcatgagggatgaattcagtcaactcccaccaggccccacc
tccaacattggagattacaatggagattacaacattggaaattacatttcaagggttaag
cccccatggctgctttcgtgggctggcattgttgagtgtctgcagcttttcaaggctcag
ggtacaagctgtcagtggatctaccattctggggttggagaacggtggccctcttctcac
agctccattcggcagttccccagtgaggacattgtgtag

>gi568815585f:72628941_72855213|GENSCAN_predicted_peptide_5|505_aa
MGDVKESKMQITPETPGRIPVLNPFESPSDYSNLHEQTLASPSVFKSTKLPTPGKFRWSI
DQLAVINPVEIDPEDIHRQALYLSHSRIDKDVEDKRQKAIEEFFTKDVIVPSPWTDHEGK
QLSQCHSSKCDYFRADEFADQSPGNLSSSSLRRKLFLDGNGSISDSLPSASPGSPHSGVQ
TSLEMFYSIDLSPVKCRSPLQTPSSGQFSSSPIQASAKKYSLGSITSPSPISSPTFSPIE
FQIGETPLSEQRKFTVHSPDASSGTNSNGITNPCIRSPYIDGCSPIKNWSPMRLQMYSGG
TQYRTSVIQIPFTLETQGEDEEDKENIPSTDVSSPAMDAAGIHLRQFSNEASTHGTHLVV
TAMSVTQNQSSASEKELALLQDVEREKDNNTVDMVDPIEIADETTWIKEPVDNGSLPMTD
FVSGIAFSIENSHMCMSPLAESSVIPCESSNIQMDSGYNTQNCGSNIMDTVGAESYCKES
DAQTCEVESKSQAFNMKSSAKETCF

>gi568815585f:72628941_72855213|GENSCAN_predicted_CDS_5|1518_bp
atgggagatgtcaaggaatcaaagatgcaaataacaccagaaactccaggaaggatccct
gttttaaatccttttgaaagtcctagtgattattctaatctccatgaacaaactctcgcc
agtccttctgtttttaaatcaacaaaattaccaactccagggaaatttagatggtctatt
gatcaactagctgtaataaatcctgtagaaatagacccagaagatattcatcgtcaagct
ttatacttaagtcattctcgaatagataaagatgtggaagacaaaagacaaaaagccatt
gaagagtttttcactaaagatgtcatcgtaccctctccttggactgatcatgaagggaaa
cagctttcacaatgtcattccagtaaatgtgactattttagagctgatgaatttgcagat
caatctcctggaaacctcagttcttcatccctcagaagaaagctgtttttagatgggaac
ggaagcatctccgactccttaccttcggcttctcccggaagtcctcacagtggtgttcaa
acatcactagagatgttttattcaatagatttgtctcctgtaaagtgtaggagccccttg
cagacaccaagttcggggcagttttcttctagccctattcaggctagtgcaaaaaaatac
agcttgggaagcataactagtccttcgcctatttcttcacccactttctcaccaattgaa
tttcagataggagagactccactctcagaacaaaggaagtttactgttcattctcctgat
gcttcatctggaacaaattctaatgggataactaatccgtgtatcagaagtccttatata
gatggctgctcgccaattaaaaattggtctcctatgagacttcagatgtatagtggtggt
actcagtatcggacctcagtgattcagataccttttactcttgagactcaaggtgaagat
gaggaagataaagagaatattccttccacagatgtctcatcacccgccatggatgctgct
ggaatacacctacggcagtttagtaatgaggcttctacccatggtacacatttggttgtg
actgccatgtctgttacacaaaatcagtccagtgcttctgagaaagaattagcactgttg
caggatgttgaaagggagaaagacaataacactgtggatatggttgatcctatagagata
gcagatgagaccacttggattaaggagccggttgataatggcagtttacccatgactgat
tttgtaagtggcattgccttcagtattgaaaactctcatatgtgcatgtcacctcttgct
gaaagcagtgtcattccttgtgaaagcagtaacattcagatggatagtggctataatacg
cagaattgtggaagcaatattatggatacagttggggcagaaagttactgcaaagaaagt
gatgcacaaacatgtgaagttgagagtaaatctcaagcatttaatatgaagagttcagct
aaagaaacgtgcttttag

>gi568815585f:72628941_72855213|GENSCAN_predicted_peptide_6|929_aa
MKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQPQDPASSVCPQPHYLLPDTNVLLHQ
IDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHFYTFTNEHHRETYVEQE
QGENANDRNDRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIEEGIPAFTCEE
YVKSLTANPELIDRLACLSEEGIILQGLKHLNRAVHEDIVAVELLPKSQWVAPSSVVLHD
EGQNEEDVEKEEETERMLKTAVSEKMLKPTGRVVGIIKRNWRPYCGMLSKSDIKESRRHL
FTPADKRIPRIRIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDVGEKETETEV
LLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGCTDIDDALHC
RELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKASLTYAEAQLRIDSANM
NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETNSM
VEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVKAARSRNLEIKTDTAKSLA
ESLDQAESPTFPYLNTLLRILATRCMMQAVYFCSGMDNDFHHYGLASPIYTHFTSPIRRY
ADVIVHRLLAVAIGADCTYPELTDKHKLADICKNLNFRHKMAQYAQRASVAFHTQLFFKS
KGIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPNPQLIYDDEIPSLKIEDTVFH
VFDKVKVKIMLDSSNLQHQKIRMSLVEPQMRKWRFMVCSHTATKKYPKLGNYYKGKRFNG
LSSALLVRPQDTYTIMAEKGEAGTFFTGRQDENDCQQWKCQTLIKPSDLMRPAHYHRNSM
EETAPMIQLPPPGPTLDTWGLLQFKVRFG

>gi568815585f:72628941_72855213|GENSCAN_predicted_CDS_6|2790_bp
atgaagatcgtgcgcgagcactacctgcgagacgacatcggctgcggtgcgcccgggtgc
gcagcgtgtggaggggcgcacgaggggccggccctggagccgcagccccaggacccggcg
agcagcgtctgcccgcaaccgcactacttgctgcccgacactaatgtgttactgcaccag
attgatgttcttgaggaccctgccatcaggaatgtaattgtgctacaaacagttcttcaa
gaagtgagaaatcgcagtgcccccgtatataaacgcatccgagatgtgactaataaccaa
gagaagcatttctatactttcactaatgagcaccatagagaaacctatgtagaacaagaa
cagggagaaaatgctaatgacaggaatgatagagcgattcgagtagcagcaaaatggtac
aatgaacatttgaaaaaaatgtcagcagacaaccagctgcaagttatcttcataacaaat
gacaggagaaacaaagagaaagccatagaagaaggaataccagctttcacttgtgaagaa
tatgtaaagagcctaactgctaaccccgaactcatagatcgtcttgcttgtttgtctgaa
gaagggataatcttacagggacttaaacatttaaacagagctgttcacgaagatattgtg
gctgtggagcttctccccaagagtcagtgggtagcaccatcttctgtggttttacatgat
gaaggtcaaaatgaagaagatgtggagaaagaagaagagacagaacgaatgcttaagact
gctgtaagcgagaaaatgttgaagcctacaggtagagttgtaggaataataaaaaggaat
tggagaccatattgtggcatgctttccaagtctgacattaaggagtcaagaagacatctc
tttacacctgctgataagagaatccctcgaattcgcatagaaaccagacaggcttccaca
ttagaaggacggagaattattgttgctattgatggttggcccagaaattccagatatcca
aatggacactttgtgagaaatttaggtgatgttggagagaaagagactgaaacagaagtt
ttgttacttgaacacgatgttccccatcagcctttttcacaggctgttcttagttttctg
ccaaagatgccctggagcattactgaaaaggacatgaaaaaccgagaagacctgaggcat
ctgtgtatttgtagtgtagacccaccaggatgtactgatatagacgatgctctacattgt
cgagaactcgaaaatggaaatttggaggttggtgttcatattgctgatgtgagccatttt
attaggccaggaaatgccttggatcaagaatcagccagaagaggaacaactgtgtatctt
tgtgaaaaggcatctctgacgtatgctgaagctcagttgagaattgattcagcaaacatg
aatgatgatattaccactagtctccgtggactgaataaactagccaaaattctgaagaaa
agaaggattgaaaaaggggctttgactctatcctctcctgaagttcgattccacatggac
agtgaaactcacgatcctatagatctgcagaccaaggaacttagggaaacaaattccatg
gttgaagaatttatgttacttgccaatatttctgttgcaaaaaaaattcatgaggaattt
tctgaacatgctctgcttcgaaaacatcctgctccacctccatcaaattatgaaattctt
gttaaggcagccaggtcaaggaatttggaaattaagactgatacagccaagtctttggct
gagtctttggatcaggccgaatctcctacttttccatatctaaacactctgttgagaata
ttagccactcgctgtatgatgcaagctgtgtacttctgttctggaatggataatgatttt
catcactatggcttagcgtctccaatatacacacattttacttcacccattagaagatac
gcagatgtcattgttcatcggcttttggctgtggctattggggctgactgtacttatcca
gagttgacagacaaacacaagcttgcagatatatgtaaaaatctaaatttccggcacaaa
atggctcaatatgcccaacgtgcatcagtggcttttcatacccagttattcttcaaaagc
aaaggaatagtaagtgaagaagcctatattttatttgtaagaaagaatgccattgtggta
ttaattccaaagtatggtttagaagggacagtcttttttgaagaaaaggacaaaccaaac
ccacagcttatttatgatgatgagataccctcacttaaaatagaagatacagtgttccat
gtatttgataaagttaaagtgaaaatcatgttagactcatctaatcttcaacatcagaag
atccgaatgtccctggtagaaccacagatgagaaaatggaggtttatggtctgttctcac
actgctacgaagaaataccccaaactgggtaattattataaaggaaagaggtttaatgga
ctcagttccgcattgctggtgaggcctcaggacacttacacaatcatggcagaaaaagga
gaagcaggcacctttttcacagggcggcaggatgaaaatgactgccagcagtggaaatgc
cagacgcttataaaaccttcagatctcatgagaccggctcactatcacaggaacagcatg
gaggaaaccgcccccatgatccagttacctccacctggtcccacccttgacacgtgggga
ttgctacaattcaaggttagatttgggtga

>gi568815585f:72628941_72855213|GENSCAN_predicted_peptide_7|433_aa
MSRKISKESKKVNISSSLESEDISLETTVPTDDISSSEEREGKVRITRQLIERKELLHNI
QLLKIELSQKTMMIDNLKVDYLTKIEELEEKLNDALHQKQLLTLRLDNQLAFQQKDASKY
QELMKQEMETILLRQKQLEETNLQLREKAGDVRRNLRDFELTEEQYIKLKAFPEDQLSIP
EYVSVRFYELVNPLRKEICELQVKKNILAEELSTNKNQLKQLTETYEEDRKNYSEVQIRC
QRLALELADTKQLIQQGDYRQENYDKVKSERDALEQEVIELRRKHEILEASHMIQTKERS
ELSKEVVTLEQTVTLLQKDKEYLNRQNMELSVRCAHEEDRLERLQAQLEESKKAREEIDH
YKTEYENKLHDELEQIRLKTNQEIDQLRNASREMYERENRNLREARDNAVAEKERAVMAE
KDALEKHDQLLDS

>gi568815585f:72628941_72855213|GENSCAN_predicted_CDS_7|1299_bp
atgtctcgaaaaatttcaaaggagtcaaaaaaagtgaacatctctagttctctggaatct
gaagatattagtttagaaacaacagttcctacggatgatatttcctcatcagaagagcga
gagggcaaagtcagaatcaccaggcagctaattgaacgaaaagaactacttcataatatt
cagttactaaaaattgagctatcccagaaaactatgatgatcgacaatttgaaagtggat
tatcttacaaagattgaagaattggaggagaaacttaatgatgcacttcaccagaagcag
ctactaacattgagattagacaaccaattggcttttcaacagaaagatgccagcaaatat
caagaattaatgaaacaagaaatggaaaccattttgttgagacagaaacaactagaagag
acaaatcttcagctaagagaaaaagctggagatgttcgtcgaaacctgcgtgactttgag
ttgacagaagagcaatatattaaattaaaagcttttcctgaagatcagctttctattcct
gaatatgtatctgttcgcttctatgagctagtgaatccattaagaaaggaaatctgtgaa
ctacaagtgaaaaagaatatcctagcagaagaattaagtacaaacaaaaaccaactgaag
cagctgacagagacatatgaggaagatcgaaaaaactactctgaagttcaaattagatgt
caacgtttggccttagaattagcagacacaaaacagttaattcagcaaggtgactaccgt
caagagaactatgataaagtcaagagtgaacgtgatgcacttgaacaggaagtaattgag
cttaggagaaaacatgaaatacttgaagcctctcacatgattcaaacaaaagaacgaagt
gaattatcaaaagaggtagtcaccttagagcaaactgttactttactgcaaaaggataaa
gaatatcttaatcgccaaaacatggagcttagtgttcgctgtgctcatgaagaggatcgc
cttgaaagacttcaagctcaactggaagaaagcaaaaaggctagagaagagatagaccat
tataaaacagaatatgaaaataaactacatgatgaactagaacaaatcagattgaaaacc
aaccaagaaattgatcaacttcgaaatgcctctagggaaatgtatgaacgagaaaacaga
aatctccgagaagcaagggataatgctgtggctgaaaaggaacgagcagtgatggctgaa
aaggatgctttagaaaaacacgatcagctcttagacagn