GENSCAN 1.0	Date run:  6-Nov-116	Time: 14:39:00

Sequence gi568815585f:30635606_30864103 : 228498 bp : 44.79% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7023   7152  130  1  1   78   92    13 0.032   0.45
 1.02 Intr +  11327  11452  126  2  0   77   87    21 0.013   0.69
 1.03 Intr +  17543  17700  158  2  2  134  115    -5 0.030   6.45
 1.04 Term +  21869  23751 1883  0  2  114   38   677 0.035  50.66
 1.05 PlyA +  25129  25134    6                               1.05

 2.07 PlyA -  25681  25676    6                               1.05
 2.06 Term -  27665  27649   17  0  2  117   44    26 0.033  -0.50
 2.05 Intr -  35957  35869   89  1  2   57  100    43 0.081   2.01
 2.04 Intr -  36204  36096  109  1  1   81   79    23 0.009   0.04
 2.03 Intr -  41463  41429   35  2  2   94   86    29 0.013   1.17
 2.02 Intr -  51258  51131  128  0  2   87   56    65 0.036   2.68
 2.01 Init -  61783  61736   48  1  0  100  -26   111 0.517   1.85
 2.00 Prom -  63348  63309   40                              -2.66

 3.00 Prom +  64743  64782   40                              -3.96
 3.01 Init +  70077  70094   18  2  0   91   62    37 0.270   0.36
 3.02 Intr +  70583  70734  152  1  2   96   42   101 0.045   5.26
 3.03 Intr +  81697  81741   45  1  0   69   70    90 0.009   2.82
 3.04 Intr +  99946 100070  125  1  2   82   91   140 0.450  13.93
 3.05 Intr + 108213 108302   90  1  0   98   42    60 0.816   2.37
 3.06 Intr + 108455 108554  100  0  1   78   89   107 0.731   8.97
 3.07 Intr + 116278 116377  100  1  1  101   91    43 0.623   6.01
 3.08 Intr + 120287 120420  134  1  2   37   92    20 0.086  -3.26
 3.09 Term + 128339 128501  163  2  1   95   35   147 0.907   7.51
 3.10 PlyA + 128792 128797    6                               1.05

 4.00 Prom + 135552 135591   40                              -4.76
 4.01 Init + 147686 147758   73  1  1  110  103    62 0.936   9.18
 4.02 Intr + 161818 161840   23  2  2   98  113     8 0.102   1.56
 4.03 Intr + 162370 162509  140  0  2   50   72    66 0.083   0.46
 4.04 Intr + 162714 162850  137  0  2   70   67    38 0.058   0.11
 4.05 Term + 167573 167655   83  0  2   69   43    73 0.027  -1.24
 4.06 PlyA + 170029 170034    6                               1.05

 5.10 PlyA - 171536 171531    6                               1.05
 5.09 Term - 173014 172869  146  2  2  111   42    81 0.685   3.87
 5.08 Intr - 183925 183868   58  1  1   72   95    35 0.304   1.06
 5.07 Intr - 196594 196442  153  1  0  104   60    49 0.785   3.97
 5.06 Intr - 197881 197452  430  0  1   13   64   212 0.045   5.02
 5.05 Intr - 201201 201174   28  1  1   81  105     2 0.021  -1.63
 5.04 Intr - 201445 201281  165  2  0   49   76    81 0.217   2.93
 5.03 Intr - 216768 216405  364  0  1   45   50   398 0.243  26.46
 5.02 Intr - 220324 220271   54  1  0   74   93    57 0.927   3.98
 5.01 Intr - 225169 225116   54  1  0   61  107    26 0.215   0.98

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  14404  14304  101  2  2   81   48    98 0.838   3.39
S.002 Sngl +  22459  23751 1293  0  0   89   38   602 0.929  51.30
S.003 Term +  40303  40421  119  2  2   86   48    81 0.826   2.60
S.004 Init + 105991 106039   49  0  1   86   58    39 0.827  -0.19


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:30635606_30864103|GENSCAN_predicted_peptide_1|765_aa
XDMESPVFAFPLLLKLETHIEKLFLYSFSWDFECSQCGHQYQNRHMKSLVTFTNVIPEWH
PLNAAHFGPCNNCNSKSQIRKMVLEKVSPIFMLHFVEGLPQNDLQHYAFHFEGCLYQITS
VIQYRANNHFITWILDADGSWLECDDLKGPCSERHKKFEVPASEIHIVIWERKISQVTDK
EAACLPLKKTNDQHALSNEKPVSLTSCSVGDAASAETASVTHPKDISVAPRTLSQDTAVT
HGDHLLSGPKGLVDNILPLTLEETIQKTASVSQLNSEAFLLENKPVAENTGILKTNTLLS
QESLMASSVSAPCNEKLIQDQFVDISFPSQVVNTNMQSVQLNTEDTVNTKSVNNTDATGL
IQGVKSVEIEKDAQLKQFLTPKTEQLKPERVTSQVSNLKKKETTADSQTTTSKSLQNQSL
KENQKKPFVGSWVKGLISRGASFMPLCVSAHNRNTITDLQPSVKGVNNFGGFKTKGINQK
ASHVSKKARKSASKPPPISKPPAGPPSSNGTAAHPHAHAASEVLEKSGSTSCGAQLNHSS
YGNGISSANHEDLVEGQIHKLRLKLRKKLKAEKKKLAALMSSPQSRTVRSENLEQVPQDG
SPNDCESIEDLLNELPYPIDIASESACTTVPGVSLYSSQTHEEILAELLSPTPVSTELSE
NGEGDFRYLGMGDSHIPPPVPSEFNDVSQNTHLRQDHNYCSPTKKNPCEVQPDSLTNNAC
VRTLNLESPMKTDIFDEFFSSSALNALANDTLDLPHFDEYLFENY

>gi568815585f:30635606_30864103|GENSCAN_predicted_CDS_1|2298_bp
ngtgatatggaaagccctgtgtttgcatttcccctgctcttaaaactagaaacccacatt
gaaaagctcttcctatattctttttcttgggactttgaatgttcgcagtgtggacaccaa
tatcaaaacaggcatatgaagagtctggtcacctttacaaatgtcatccctgagtggcac
ccacttaatgctgcccattttggtccatgtaacaattgcaacagtaaatcacaaataaga
aaaatggtattagaaaaagtatctcccatattcatgttgcactttgtagaaggcttacca
cagaatgacttgcagcactatgcatttcattttgaaggctgtctttatcagataacttct
gtaattcagtatcgagcaaataatcattttataacatggattttagatgctgatggaagt
tggctggaatgtgatgacttaaaaggcccatgttctgaaaggcacaagaaatttgaagtt
cctgcttcagagatacatattgttatttgggaaagaaaaatatcccaagtgacagataaa
gaagctgcctgccttccacttaaaaagactaatgaccaacacgctctcagtaatgagaaa
ccagtatctttaacatcgtgttctgtgggtgatgctgcctcagctgaaacagcctcagta
actcaccctaaagatatatcagttgcccctcgtactctttcacaggacacagctgtaact
catggagatcatttactttcaggtccaaaaggtttggttgacaatattttacctctgaca
cttgaagaaactatccagaaaacagcctcagtttcacagttaaattctgaagctttcctg
ttagaaaataaacctgtagcagaaaatacaggaattctcaaaaccaatactttgctatca
caagaatcactaatggcttcttcagtatcagctccatgtaatgaaaagcttattcaagac
caatttgtggacataagttttccatcccaagttgtaaatacaaacatgcagtcagtacag
ctgaatacagaagatactgtaaatactaaatctgtgaataatactgatgctactggtctt
atacagggagtgaagtcagtagaaattgagaaggacgctcagttaaaacaattccttaca
ccaaaaactgaacaattaaaaccagaacgtgtcacatctcaggtatctaatttgaagaaa
aaagaaactacagcagattctcaaaccacaacatctaagtcattacagaatcagtctctg
aaagaaaatcagaagaagccatttgtgggaagttgggttaaaggcttaataagcaggggt
gcttcttttatgccactctgtgtttcagctcataatagaaacactataactgatttacaa
ccttcagttaaaggggtaaataattttggtggctttaaaactaaaggtataaaccagaag
gccagccacgtatccaagaaagctcgtaagagtgcaagtaagcctcctcccatcagtaag
ccaccagcaggccctccatcgtctaatggcacagctgcccacccacatgctcatgctgct
tcagaagttttggaaaagtctggaagcacctcatgtggagctcaactcaaccacagttct
tatgggaatggtatttcttcagcaaaccatgaagacttggtggaaggtcagattcataaa
cttcgtctaaaacttcgtaaaaagctaaaggcagaaaagaagaaattagctgctcttatg
tcttccccgcaaagcagaacagttcgaagtgaaaatctagaacaggtgccccaggatggg
tctccaaatgattgtgaatcaatagaggacttgttaaatgagctaccatatccaattgat
attgccagtgagtctgcatgcaccactgttcctggtgtttccctgtacagtagtcaaact
catgaagaaattttagcggaattattgtctcctacacctgtttcaacagagctgtcagaa
aatggggaaggtgactttaggtatttgggaatgggagatagtcatatcccaccaccagta
ccaagtgaattcaatgatgtttcccagaacacacatctgagacaggaccataattattgt
agccccaccaagaaaaatccatgtgaagttcagccagactctctgacaaataatgcctgc
gttagaacattaaacttggagagtccgatgaagactgatattttcgatgagtttttttcc
tcctcagcattaaatgctttagcaaatgacacattagacctacctcatttcgatgaatat
ctgtttgagaattattga

>gi568815585f:30635606_30864103|GENSCAN_predicted_peptide_2|141_aa
MVGSRFADKEDFLEEASSECEAYSVETPCLKIDNAVETLTSSPLLPSYLEANNWGLPDVL
DMKSGEMKYKAGRHPLRHHLLREPPLMLLRSNIDTPSPSSHHNPRKQVWFTDGQPDKNAS
DGVSASQPKKNVPRPRTFSAI

>gi568815585f:30635606_30864103|GENSCAN_predicted_CDS_2|426_bp
atggtgggcagccgatttgcagacaaggaggacttcctggaggaggcaagctctgaatgt
gaagcctactcagtggagacaccttgcctgaaaatagacaatgcagtggaaaccctcacc
agctccccactcctcccgtcttacctagaagcaaacaactggggtttaccagatgttctg
gacatgaagtctggagaaatgaagtataaagctgggagacatccgctgaggcatcacctt
ctcagggaacctcccctgatgctgcttcgatctaatatagacaccccttctcccagcagt
caccacaacccccggaaacaggtatggttcacagatggacaaccagataaaaatgcatct
gatggagtgtcagcaagtcagccaaagaaaaatgttcccaggccacgaacatttagtgcc
atctga

>gi568815585f:30635606_30864103|GENSCAN_predicted_peptide_3|308_aa
MAKATLEIGGSIKKELKRSSTILWNTIITIITISTTNQHHHYQKHSPGVCLTNCKLHSIT
TIINAEDFCEQRAGCAAGGRAVLSGEPEANMDQETVGNVVLLAIVTLISVVQNDCKILES
GGRALLMTVFLTPNTVFSREQLLRFFAHKVEHESRTQNGRSFQRTGTLAFERVYTAKWQL
AAPSYWVDVSGITNGIYVSCTMVIINFNFQHVLVATKLTQVFSFLHLVPAAFAGLMYLFV
RQKYFVGYLGERTQSTPGYIFGKRIILFLFLMSVAGIFNYYLIFFFGSDFENYIKTISTT
ISPLLLIP

>gi568815585f:30635606_30864103|GENSCAN_predicted_CDS_3|927_bp
atggccaaggccaccttggagattggtggctccatcaaaaaggagttaaaaagaagcagc
actattttgtggaatacaatcatcaccattatcaccatcagcaccaccaaccagcaccac
cattatcaaaagcattcacctggtgtctgccttacaaactgcaaactgcacagcataaca
acaatcatcaatgcagaagacttctgcgagcaaagggcaggttgtgcagctggaggcaga
gcagtcctctctggggagcctgaagcaaacatggatcaagaaactgtaggcaatgttgtc
ctgttggccatcgtcaccctcatcagcgtggtccagaatgactgtaagatcctagaaagt
gggggccgtgccttgctcatgactgtgtttctaacaccaaacacagtgttcagtagagag
cagctgctgagattctttgcccataaagtggagcacgaaagcaggacccagaatgggagg
agcttccagaggaccggaacacttgcctttgagcgggtctacactgccaagtggcagctg
gctgccccatcttattgggtagatgtaagtggaattacgaatgggatttatgtttcatgc
acgatggtgattattaacttcaactttcagcatgttttggtggctacgaaactgacacag
gtgttttcatttctccacttagttcctgctgcgtttgctggactgatgtacttgtttgtg
aggcaaaagtactttgtcggttacctaggagagagaacgcagagcacccctggctacata
tttgggaaacgcatcatactcttcctgttcctcatgtccgttgctggcatattcaactat
tacctcatcttctttttcggaagtgactttgaaaactacataaagacgatctccaccacc
atctcccctctacttctcattccctaa

>gi568815585f:30635606_30864103|GENSCAN_predicted_peptide_4|151_aa
MADLLLSMLLLTLSLCWCRARLYTYRETSSEKEGYPGSPRQPLAAPLLWNPGFLHLKGES
SGTTPGAQEGCTCQGPTDSFPCCLLGLQQRFLQPRGISGNSLEDEATPKSRGVFAGLTVE
LWRASWMSLSVRVTGKAPGLVTVSSVGKKYG

>gi568815585f:30635606_30864103|GENSCAN_predicted_CDS_4|456_bp
atggctgatcttctactttccatgctcctgctcacactgtctctgtgctggtgtagagca
aggctctacacatatagggaaaccagctcagagaaggagggatatcctgggagtcccagg
cagccactggcagcacccctgctgtggaacccaggattcctgcacctgaaaggggagtct
tctgggaccactcctggagcccaggagggctgcacgtgtcaggggcccacagacagcttc
ccttgctgtctccttggactgcagcagcgtttcttacagccacgtggcatctcagggaat
tctctggaagatgaggctacaccgaagtcaagaggcgtctttgctgggctcactgttgag
ctgtggagggcctcgtggatgagcctttccgtgagggtgaccggaaaggcgcctgggctg
gtgacggtgtcaagtgtaggcaagaaatacggctga

>gi568815585f:30635606_30864103|GENSCAN_predicted_peptide_5|483_aa
VFRLLGGYFKNYSDIVKTFDEVDYVASSELHAWNLLDQDLEKPDGSKVVLTQDQDLEKPD
GSKVVLTQDQDLEKPDGSKVVLTQDQDLEKPDGSKVVLTQDQDLEKPDGSKVVLTQDQDL
EKPDGSKVVLTQDQDLEKPDGSKVVLTQDQDLEQPDGLEIPNVSDNGEWAWKVLQEAKGV
YPMLGLTLDREKGTSTDAERKIRTQKKCNGSQESFLFPARERGCQCQVMGNRVLWEGRKK
GAATGFSPMAQGKPTDSPLCLEPLTPELTMLSVQVCRGQGGDGPLEPEHQGAAPRLAQRV
SIWHQKAAAFKNQQAKEMKNTRPGPPRGTQTLAGLRGLSGKGMTNVVIAWLRASSAVTAL
LSRSQMGPALKGSSLLSSPWVPTMHSLHIIFVPTDRDPVTLPPMPVGLQEALMQVHLTIL
DYSDELGETSKVLSVGSITPTHSPSASPTGFISKPSHTYFMDSATPRPSSCHVLPELLQN
PSS

>gi568815585f:30635606_30864103|GENSCAN_predicted_CDS_5|1452_bp
gtatttcgccttctcggcggttactttaaaaattattctgacattgtaaaaacgtttgat
gaagtagactatgtggctagctctgagctgcatgcttggaatctgctggaccaagatctg
gagaaaccagacgggtctaaggtggtcctaactcaggaccaagatctggagaaaccagac
gggtctaaggtggtcctaactcaggaccaagatctggagaaaccagacgggtctaaggtg
gtcctaactcaggaccaagatctggagaaaccagacgggtctaaggtggtcctaactcag
gaccaagatctggagaaaccagacgggtctaaggtggtcctaactcaggaccaagatctg
gagaaaccagacgggtctaaggtggtcctaactcaggaccaagatctggagaaaccagac
gggtctaaggtggtcctaactcaggaccaagatctggagcaaccagatgggttagaaatt
cctaacgtatctgataatggggagtgggcgtggaaggtgttgcaggaagccaagggggtc
tatcccatgcttgggttgaccctggacagagaaaaaggaacatctacagatgcagaaaga
aaaataagaactcaaaagaaatgcaacgggagtcaggaatcattcctgttccctgccagg
gaaaggggttgccagtgccaggtgatgggcaacagggtgctctgggaaggaaggaaaaaa
ggagctgccacagggttttctccaatggcccaggggaaacccacagattcgcctttgtgt
ctggagccgttgaccccagaactcacaatgctcagtgttcaggtctgcaggggccaaggt
ggtgatggtcccctcgagccagagcaccagggagcagccccaaggctggcccagagggtc
tccatttggcaccaaaaagcagctgcatttaaaaatcaacaggcaaaggaaatgaaaaac
acccgcccagggccacctaggggcacccagacccttgcaggtttacgaggcctttctgga
aaaggcatgactaatgttgttattgcctggctgcgcgccagcagtgctgtcaccgccttg
ctgagccgcagtcagatgggccctgccctcaagggcagctcactcctaagcagtccatgg
gtgcccactatgcacagcctccatatcatcttcgttccaacagatagggatcccgtgacc
ctgccacccatgccagttggattacaggaagccctgatgcaggttcacctgactattttg
gattattctgatgagttgggagagacatcaaaggtcctttctgtaggctccatcacccca
acacacagtccatcagcaagtccaactggcttcatctccaaaccatcccacacctacttc
atggactctgctacccccagaccaagctcctgccatgtgttgcctgaactattgcaaaat
ccttctagctga