GENSCAN 1.0	Date run:  8-Nov-116	Time: 13:34:02

Sequence gi568815586f:100257392_100520156 : 262765 bp : 40.15% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 Intr -   4377   4339   39  1  0  117   94    37 0.587   4.48
 1.05 Intr -   5018   4873  146  1  2   52   86   144 0.959   9.61
 1.04 Intr -   6301   6106  196  2  1   47   88    76 0.116   1.05
 1.03 Intr -   9989   9529  461  1  2  117   68   196 0.186  12.40
 1.02 Intr -  10267  10045  223  2  1   63   93   151 0.494   9.36
 1.01 Init -  15166  15097   70  1  1   71   29    81 0.213   1.76
 1.00 Prom -  19480  19441   40                              -7.95

 2.00 Prom +  19610  19649   40                              -6.15
 2.01 Init +  25580  25756  177  1  0  112  109   119 0.988  15.71
 2.02 Intr +  34112  34269  158  1  2   68   99   162 0.991  13.19
 2.03 Intr +  40640  40784  145  2  1   91   91    77 0.593   7.66
 2.04 Term +  46116  46292  177  2  0   72   50   117 0.010   3.00
 2.05 PlyA +  47397  47402    6                               1.05

 3.00 Prom +  50775  50814   40                              -3.65
 3.01 Init +  51625  51681   57  0  0   78   74    34 0.799   2.36
 3.02 Intr +  53653  53802  150  0  0   92   80    48 0.879   3.84
 3.03 Intr +  55041  55262  222  2  0   81   68    68 0.731   1.50
 3.04 Intr +  56031  56147  117  2  0   40  113    52 0.858   2.64
 3.05 Intr +  57098  57223  126  1  0   77   76    63 0.937   3.96
 3.06 Intr +  58167  58343  177  2  0   76   91    88 0.945   7.09
 3.07 Intr +  60412  60534  123  0  0   93   92    -2 0.569   0.56
 3.08 Intr +  66134  66247  114  1  0   98  115    27 0.978   6.12
 3.09 Intr +  69231  69363  133  2  1   91   38    82 0.996   2.80
 3.10 Intr +  71810  71928  119  0  2   99   91   108 0.999  11.46
 3.11 Intr +  76775  76875  101  1  2   51  100    64 0.914   1.89
 3.12 Intr +  78234  78300   67  0  1   75  110    46 0.977   3.49
 3.13 Intr +  78420  78515   96  2  0   83   70   127 0.998   9.69
 3.14 Intr +  79996  80115  120  0  0   82   71    99 0.962   7.37
 3.15 Term +  81137  81781  645  1  0   67   51   453 0.983  32.63
 3.16 PlyA +  82726  82731    6                               1.05

 4.00 Prom +  95557  95596   40                              -3.55
 4.01 Init + 100001 100101  101  1  2   64   98    95 0.343   7.88
 4.02 Intr + 103604 103649   46  2  1   85  113    30 0.179   2.69
 4.03 Intr + 116721 116854  134  2  2   40   72    59 0.010  -1.98
 4.04 Intr + 123310 123562  253  1  1   80   77   313 0.799  25.91
 4.05 Intr + 133610 133728  119  1  2   69  110    58 0.893   4.44
 4.06 Intr + 135978 136092  115  0  1   75   75    53 0.869   2.23
 4.07 Intr + 140167 140251   85  0  1   59   93    86 0.930   4.67
 4.08 Intr + 144386 144472   87  0  0   99  101    34 0.961   4.82
 4.09 Intr + 144949 145088  140  2  2   96   84    56 0.949   5.26
 4.10 Intr + 146647 146779  133  0  1  152   69    69 0.984  10.70
 4.11 Intr + 155379 155489  111  1  0  128   95    22 0.951   6.33
 4.12 Intr + 160638 160765  128  1  2   84   98   104 0.962  10.48
 4.13 Term + 162424 162768  345  0  0   65   35   414 0.999  27.31
 4.14 PlyA + 163180 163185    6                               1.05

 5.04 PlyA - 164197 164192    6                               1.05
 5.03 Term - 167777 167720   58  1  1  113   36    38 0.315  -2.72
 5.02 Intr - 173372 173126  247  0  1   57   97   218 0.679  15.20
 5.01 Init - 174110 174008  103  2  1   60   68   173 0.554  10.99
 5.00 Prom - 178400 178361   40                              -5.35

 6.05 PlyA - 178642 178637    6                               1.05
 6.04 Term - 193949 193816  134  0  2   75   48   107 0.213   2.67
 6.03 Intr - 206123 205978  146  1  2   46   84   108 0.058   5.21
 6.02 Intr - 218199 218076  124  1  1  122   94    63 0.316   9.02
 6.01 Init - 227777 227720   58  2  1   66   88    68 0.977   6.12
 6.00 Prom - 232289 232250   40                              -2.35

 7.00 Prom + 236374 236413   40                              -4.85
 7.01 Init + 239629 239767  139  0  1   76   20    96 0.040   1.95
 7.02 Intr + 245977 246105  129  2  0   86   97    10 0.174   1.45
 7.03 Intr + 253387 253752  366  2  0   78  121   211 0.913  17.59

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  44228  43967  262  1  1   29   48   213 0.896   5.41
S.002 Sngl - 117627 117367  261  0  0   35   32   221 0.808   6.11


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:100257392_100520156|GENSCAN_predicted_peptide_1|379_aa
MQAKNLEKTVQTESKNWCTMSQYGLFRGLGPLGSAPRSSLLVQPRFARAPTADRPAGRRQ
ARHQATPTSLSGPGRPNPGASPPFPPRRLREPRRESRRRGGAGALSPRPPNKRLLAVPAL
PSCLATDSGFTPYPPPPPRPQTSELEGKGWGGEGPGTKSKGGGKRLKDLPAGGMTSLPAG
SEEAEPVLLSAPGVRWGGAMVPGEEPARELMAVLLTPRFRRLVSQNELPGPGLNGPSSRN
RRDGFCRKRRTGVHLCQVLMNHKVFEPVGMKKLFKKEKELEFEDSNISLYRFLGNKSSYD
CCKRQKDAENEFNETLRPGYEMISNPLAQEIGEERIEELIHTINGNPALCPNITVQKPFL
RLSKEGVSFYTAITSDKTX

>gi568815586f:100257392_100520156|GENSCAN_predicted_CDS_1|1137_bp
atgcaggccaaaaacttagaaaaaaccgtccagactgaaagtaaaaattggtgcacgatg
agccagtatggcctctttcgaggactcggccctctcggatccgctccccggagctcgctg
ctcgtccagccccgctttgcgcgggcgccgaccgccgatcgcccggccggccgccggcag
gcccgtcaccaggcaacacccaccagcctgagcggccctgggaggcctaacccgggcgcg
agtcctccattccctcctcgccggctccgggagcccaggcgagagagccgccggaggggc
ggtgctggggctctttccccccgcccccctaataaacgcctcctggctgttcctgctctg
ccttcgtgcctggccactgactctggctttactccatatcctccgccgcccccgcggccg
caaacgtcggagctagaaggaaaggggtggggaggggagggaccggggacgaagagtaag
ggagggggaaaaagactaaaagacctgccggccgggggcatgacgtcacttcctgccggt
tcggaagaggcggagccagtacttctctccgccccgggtgtcaggtggggcggggctatg
gtgccaggggaggagccagcgcgcgagcttatggcggttcttttgactccgaggttccgt
agacttgtcagtcagaacgagcttccgggcccagggctgaacgggccaagttccaggaac
cgtagagatggcttctgccggaaaaggaggacaggggttcatctttgccaagttctaatg
aatcacaaagtatttgaaccagtaggaatgaagaagcttttcaaaaaagaaaaggaatta
gaatttgaagattccaacattagtctctacaggtttctaggcaataaatcatcttacgat
tgttgcaaaagacaaaaggatgctgagaatgagttcaatgaaaccttgagaccaggatat
gaaatgatttcaaatcctctagcacaggagattggtgaggaaagaattgaggaacttatt
catacaataaatgggaatccagctttatgtccaaatatcacagttcagaaaccttttctc
cggctttcaaaagaaggagtttccttctacacagcaattacatcagataagacagnn

>gi568815586f:100257392_100520156|GENSCAN_predicted_peptide_2|218_aa
MESMLNKLKSTVTKVTADVTSAVMGNPVTREFDVGRHIASGGNGLAWKIFNGTKKSTKQE
VAVFVFDKKLIDKYQKFEKDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTE
PVFASLANVLGNWENLPSPISPDIKDYKLYDVETKYGLLQSGPSAACLLEFAGGPLQTLF
AWVSPADAAEQQRLLPNPSSGSFVLERHLPDASQSSPV

>gi568815586f:100257392_100520156|GENSCAN_predicted_CDS_2|657_bp
atggagtccatgcttaataaattgaagagtactgttacaaaagtaacagctgatgtcact
agtgctgtaatgggaaatcctgtcactagagaatttgatgttggtcgacacattgccagt
ggtggcaatgggctagcttggaagatttttaatggcacaaaaaagtcaacaaagcaggaa
gtggcagtttttgtctttgataaaaaactgattgacaagtatcaaaaatttgaaaaggat
caaatcattgattctctaaaacgaggagtccaacagttaactcggcttcgacaccctcga
cttcttactgtccagcatcctttagaagaatccagggattgcttggcattttgtacagaa
ccagtttttgccagtttagccaatgttcttggtaactgggaaaatctaccttcccctata
tctccagacattaaggattataaactttatgatgtagaaaccaaatatggtttgcttcag
tcaggcccctctgctgcatgtctgttggagtttgctggaggtccactccagaccctgttt
gcctgggtatcaccagcggacgctgcagaacagcaaagattgctgcctaatccttcctct
ggaagctttgtcctagagaggcacctgccagatgccagccagagctctcctgtatga

>gi568815586f:100257392_100520156|GENSCAN_predicted_peptide_3|788_aa
MKEHFFSASFSDTKLKPGTVSEGLSFLHSSVKMVHGNITPENIILNKSGAWKIMGFDFCV
SSTNPSEQEPKFPCKEWDPNLPSLCLPNPEYLAPEYILSVSCETASDMYSLGTVMYAVFN
KGKPIFEVNKQDIYKSFSRQLDQLSRLGSSSLTNIPEEVREHVKLLLNVTPTVRPDADQM
TKIPFFDDVGAVTLQYFDTLFQRDNLQKSQFFKGLPKVLPKLPKRVIVQRILPCLTSEFV
NPDMVPFVLPNVLLIAEECTKEEYVKLILPELGPVFKQQEPIQILLIFLQKMDLLLTKTP
PDEIKNSVLPMVYRALEAPSIQIQELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSS
LAVRVNSLVCLGKILEYLDKWFVLDDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKLGI
TKEQLAGKVLPHLIPLSIENNLNLNQFNSFISVIKEMLNRLESEHKTKLEQLHIMQEQQK
SLDIGNQMNVSEEMKVTNIGNQQIDKVFNNIGADLLTGSESENKEDGLQNKHKRASLTLE
EKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMSSLTSLSVSTPKSS
ASSTFTSVPSMGIGMMFSTPTDNTKRNLTNGLNANMGFQTSGFNMPVNTNQNFYSSPSTV
GVTKMTLGTPPTLPNFNALSVPPAGAKQTQQRPTDMSALNNLFGPQKPKVSMNQLSQQKP
NQWLNQFVPPQGSPTMGSSVMGTQMNVIGQSAFGMQGNPFFNPQNFAQPPTTMTNSSSAS
NDLKDLFG

>gi568815586f:100257392_100520156|GENSCAN_predicted_CDS_3|2367_bp
atgaaagagcacttcttcagtgcctctttcagtgatacaaagttaaaaccaggtactgtt
tctgaaggattgtcattcttgcatagcagtgtgaaaatggtgcatggaaatatcactcct
gaaaatataattttgaataaaagtggagcctggaaaataatgggttttgatttttgtgta
tcatcaaccaatccttctgaacaagagcctaaatttccttgtaaagaatgggacccaaat
ttaccttcattgtgtcttccaaatcctgaatatttggctcctgaatacatactttctgtg
agctgtgaaacagccagtgatatgtattctttaggaactgttatgtatgctgtatttaat
aaagggaaacctatatttgaagtcaacaagcaagatatttacaagagtttcagtaggcag
ttggatcagttgagtcgtttaggatctagttcacttacaaatatacctgaggaagttcgt
gaacatgtaaagctactgttaaatgtaactccgactgtaagaccagatgcagatcaaatg
acaaagattcccttctttgatgatgttggtgcagtaacactgcaatattttgatacctta
ttccaaagagataatcttcagaaatcacagtttttcaaaggactgccaaaggttctacca
aaactgcccaagcgtgtcattgtgcagagaattttgccttgtttgacttcagaatttgta
aaccctgacatggtaccttttgttttgcccaatgttctacttattgctgaggaatgcacc
aaagaagaatatgtcaaattaattcttcctgaacttggccctgtgtttaagcagcaggag
ccaatccagattttgttaattttcctacaaaaaatggatttgctactaaccaaaacccct
cctgatgagataaagaacagtgttctacccatggtttacagagcactagaagctccttcc
attcagatccaggagctctgtctaaacatcattccaacctttgcaaatcttatagactac
ccatccatgaaaaacgctttgataccaagaattaaaaatgcttgtctacaaacatcttcc
cttgcggttcgtgtaaattcattagtgtgcttaggaaagattttggaatacttggataag
tggtttgtacttgatgatatcctacccttcttacaacaaattccatccaaggaacctgcg
gtcctcatgggaattttaggtatttacaaatgtacttttactcataagaagttgggaatc
accaaagagcagctggccggaaaagtgttgcctcatcttattcccctgagtattgaaaac
aatcttaatcttaatcagttcaattctttcatttccgtcataaaagaaatgcttaataga
ttggagtctgaacataagactaaactggagcaacttcatataatgcaagaacagcagaaa
tctttggatataggaaatcaaatgaatgtttctgaggagatgaaagttacaaatattggg
aatcagcaaattgacaaagtttttaacaacattggagcagaccttctgactggcagtgag
tccgaaaataaagaggacgggttacagaataaacataaaagagcatcacttacacttgaa
gaaaaacaaaaattagcaaaagaacaagagcaggcacagaagctgaaaagccagcagcct
cttaaaccccaagtgcacacacctgttgctactgttaaacagactaaggacttgacagac
acactgatggataatatgtcatccttgaccagcctttctgttagtacccctaaatcttct
gcttcaagtactttcacttctgttccttccatgggcattggtatgatgttttctacacca
actgataatacaaagagaaatttgacaaatggcctaaatgccaatatgggctttcagact
tcaggattcaacatgcccgttaatacaaaccagaacttctacagtagtccaagcacagtt
ggagtgaccaagatgactctgggaacacctcccactttgccaaacttcaatgctttgagt
gttcctcctgctggtgcaaagcagacccaacaaagacccacagatatgtctgcccttaat
aatctctttggccctcagaaacccaaagttagcatgaaccagttatcacaacagaaacca
aatcagtggcttaatcagtttgtacctcctcaaggttctccaactatgggcagttcagta
atggggacacagatgaacgtgataggacaatctgcttttggtatgcagggtaatcctttc
tttaacccacagaactttgcacagccaccaactactatgaccaatagcagttcagctagc
aatgatttaaaagatctttttgggtga

>gi568815586f:100257392_100520156|GENSCAN_predicted_peptide_4|598_aa
MPFKAFDTFKEKILKPGKEGVKNAVGDSLGILQSIQECARYALPAPSTKKRICEIQRGQV
ICPQVTQLAYQWQSWKSNPGYLTAQKPGVFHDTGKIDGTTEEEDNIELNEEGRPVQTSRP
SPPLCDCHCCGLPKRYIIAIMSGLGFCISFGIRCNLGVAIVEMVNNSTVYVDGKPEIQTA
QFNWDPETVGLIHGSFFWGYIMTQIPGGFISNKFAANRVFGAAIFLTSTLNMFIPSAARV
HYGCVMCVRILQGLVEESINNRTTTAHAAAINTVVNVSGEGAHEGSYAGAVVAMPLAGVL
VQYIGWSSVFYIYGMFGIIWYMFWLLQAYECPAAHPTISNEEKTYIETSIGEGANVVSLS
VGLLSAVPHMVMTIVVPIGGQLADYLRSRQILTTTAVRKIMNCGGFGMEATLLLVVGFSH
TKGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGAM
TRHKTREEWQNVFLIAALVHYSGVIFYGVFASGEKQEWADPENLSEEKCGIIDQDELAEE
IELNHESFASPKKKMSYGATSQNCEVQKKEWKGQRGATLDEEELTSYQNEERNFSTIS

>gi568815586f:100257392_100520156|GENSCAN_predicted_CDS_4|1797_bp
atgccttttaaagcatttgataccttcaaagaaaaaattctgaaacctgggaaggaagga
gtgaagaacgccgtgggagattctttgggaattttacaaagcattcaggagtgtgccaga
tatgcacttcctgctccatcaacaaagaagaggatatgtgagattcagagaggccaggtt
atttgcccccaagtcacacagctcgcgtatcagtggcagagctggaaatcaaatccaggt
tatctgactgcccagaagcctggtgtgttccatgatacaggaaaaatcgatgggacaact
gaggaagaagataacattgagctgaatgaagaaggaaggccggtgcagacgtccaggcca
agccccccactctgcgactgccactgctgcggcctccccaagcgttacatcattgctatc
atgagtgggctgggattctgcatttcctttgggatccggtgcaatcttggagttgccatt
gtggaaatggtcaacaatagcaccgtatatgttgatggaaaaccggaaattcagacagca
cagtttaactgggatccagaaacagtgggccttatccatggatcttttttctggggctat
attatgacacaaattccaggtggtttcatttcaaacaagtttgctgctaacagggtcttt
ggagctgccatcttcttaacatcgactctgaacatgtttattccctctgcagccagagtg
cattacggatgcgtcatgtgtgtcagaattctgcaaggtttagtggaggaatcaatcaac
aacagaacaacaacagcacatgccgctgccatcaacacagtggtaaatgtgtcgggggaa
ggggcccatgaaggttcctatgcaggggcagtggttgccatgcccctggctggggtgttg
gtgcagtacattggatggtcctctgtcttttatatttatggcatgtttgggattatttgg
tacatgttttggctgttgcaggcctatgagtgcccagcagctcatccaacaatatccaat
gaggagaagacctatatagagacaagcataggagagggggccaacgtggttagtctaagt
gtgggtctcttgtcagcagtcccacacatggttatgacaatcgttgtacctattggagga
caattggctgattatttaagaagcagacaaattttaaccacaactgctgtcagaaaaatc
atgaactgtggaggttttggcatggaggcaaccttactcctggtggttggcttttcgcat
accaaaggggtggctatctcctttctggtacttgctgtaggatttagtggcttcgctatt
tcaggttttaatgtcaaccacctggacattgccccacgctatgccagcattctcatgggg
atctcaaacggagtgggaaccctctctggaatggtctgtcccctcattgtcggtgcaatg
accaggcacaagacccgtgaagaatggcagaatgtgttcctcatagctgccctggtgcat
tacagtggtgtgatcttctatggggtctttgcttctggggagaaacaggagtgggctgac
ccagagaatctctctgaggagaaatgtggaatcattgaccaggacgaattagctgaggag
atagaactcaaccatgagagttttgcgagtcccaaaaagaagatgtcttatggagccacc
tcccagaattgtgaagtccagaagaaggaatggaaaggacagagaggagcgacccttgat
gaggaagagctgacatcctaccagaatgaagagagaaacttctcaactatatcctaa

>gi568815586f:100257392_100520156|GENSCAN_predicted_peptide_5|135_aa
MKPRTLAVSVTALKVARLEFVPSDVRMCSAFLPSGAQLASPSGSRTGAAGGAACQSRAVC
PHSSALGWLMGLGAVEQGAALIGEAQAAQEPMEGVGGSSMAGCRSRALSRGKAAKARSRV
NCQSSFHHFDHTSLK

>gi568815586f:100257392_100520156|GENSCAN_predicted_CDS_5|408_bp
atgaagccgcggaccctcgcggtgagtgttacagctcttaaggtggcgcgtctggagttt
gttccttccgatgttcggatgtgttcggcgtttcttccttctggagcccagctggcttca
cccagtggatcccgcaccggggctgcaggtggagctgcctgccagtcccgtgccgtgtgc
ccacactcctcagcccttgggtggttgatgggactgggtgccgtggagcagggggcggcg
ctcatcggggaggctcaggccgcacaggagcccatggagggggtgggaggctcaagcatg
gcgggctgcaggtcccgagccctgtcccgcgggaaggcagctaaggcccggtctagagta
aactgccagagctcattccatcactttgatcatacttcactgaagtaa

>gi568815586f:100257392_100520156|GENSCAN_predicted_peptide_6|153_aa
MNESNEPHIQNRAAECDWAEYKGLTTNGYSIAIGPILKRWKQEEGQGFHDFPSPAVRRGQ
RNESETEEPTKYLTTGANQSLHTEQGFIKHLPLKGFEHPLQNSLIRHGSSFDTCLSSQAG
AIPEKAHISAAATIASYPNVSNFHSLLRDEDWT

>gi568815586f:100257392_100520156|GENSCAN_predicted_CDS_6|462_bp
atgaatgaaagtaatgagccccatattcagaatagagctgcagaatgtgactgggcagag
tacaaaggcctcacaaccaatggatattccattgcaattggcccaatcttgaagaggtgg
aaacaagaggaaggacaaggattccatgactttccctctccagctgtgaggagagggcag
agaaatgagtctgaaacagaggagccaaccaagtacttaaccacaggagccaatcagtct
ttacacacagaacaagggtttatcaagcatcttccactcaaaggctttgaacaccctttg
cagaattccctaatcagacatggttcatcctttgacacttgcctttcttcccaggctgga
gcaatcccagagaaggctcacatctcagctgctgccaccatcgcctcatatcctaatgtc
tccaattttcatagcctcctccgggacgaggactggacttag

>gi568815586f:100257392_100520156|GENSCAN_predicted_peptide_7|212_aa
MREWRRGSGRCNREGGKTKEVSCQDPWCGGGQLDATGSSTENCQQRVAVNKLRMVMQFQG
LENPIQISPHCSCTPSGFFMEMMSMKPAKGVLTEQVAGPLGQNLEVEPYSQYSNVQFPQV
QPQISSSSYYSNLGFYPQQPEEWYSPGIYELRRMPAETLYQGETEVAEMPVTKKPRMGAS
AGRIKGDELCVVCGDRASGYHYNALTCEGCKX

>gi568815586f:100257392_100520156|GENSCAN_predicted_CDS_7|636_bp
atgagggagtggaggcgagggagtgggcgatgcaacagggaaggagggaaaaccaaagag
gtcagttgtcaagatccctggtgtgggggaggccagcttgatgccactgggagcagcaca
gagaactgtcagcagagggtggctgtgaataagctaagaatggtaatgcagtttcagggg
ttagaaaatccaattcaaattagtcctcactgcagctgtacgccgtcaggatttttcatg
gaaatgatgagtatgaagcccgcgaaaggtgttttaacagaacaagtggcaggtcctctg
ggacagaacctggaagtggaaccatactcgcaatacagcaatgttcagtttccccaagtt
caaccacagatttcctcgtcatcctattattccaacctgggtttctacccccagcagcct
gaagagtggtactctcctggaatatatgaactcaggcgtatgccagctgagactctctac
cagggagaaactgaggtagcagagatgcctgtaacaaagaagccccgcatgggcgcgtca
gcagggaggatcaaaggggatgagctgtgtgttgtttgtggagacagagcctctggatac
cactataatgcactgacctgtgaggggtgtaaagnn