GENSCAN 1.0	Date run:  5-Nov-116	Time: 22:30:41

Sequence gi568815586r:68101848_68325756 : 223909 bp : 38.97% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5044   5091   48  2  0   60  111    36 0.109   0.83
 1.02 Term +  11800  12062  263  2  2    8   55   218 0.210   5.20
 1.03 PlyA +  12784  12789    6                               1.05

 2.05 PlyA -  13152  13147    6                               1.05
 2.04 Term -  16710  16601  110  1  2  121   41    64 0.019   2.69
 2.03 Intr -  34562  34384  179  1  2   44   66   115 0.224   3.54
 2.02 Intr -  40971  40749  223  1  1   46   93   135 0.139   6.06
 2.01 Init -  46573  46519   55  1  1   74  100    84 0.601   9.70
 2.00 Prom -  48203  48164   40                              -4.25

 3.05 PlyA -  49061  49056    6                               1.05
 3.04 Term -  53640  53506  135  0  0  118   39   173 0.968  12.44
 3.03 Intr -  56248  56066  183  1  0   77   85   148 0.999  12.46
 3.02 Intr -  56412  56344   69  0  0  120   99    39 0.990   6.66
 3.01 Init -  57768  57655  114  0  0   67   78    59 0.795   3.15
 3.00 Prom -  57930  57891   40                              -2.95

 4.00 Prom +  72310  72349   40                              -3.05
 4.01 Init +  73079  73143   65  1  2   78   67    29 0.414   0.47
 4.02 Intr +  75795  76034  240  0  0   72  115   112 0.755   8.04
 4.03 Intr +  76117  76235  119  1  2   34   87    57 0.621  -0.61
 4.04 Term +  83526  83662  137  1  2   29   48   157 0.616   3.00
 4.05 PlyA +  83821  83826    6                               1.05

 5.04 PlyA -  85469  85464    6                               1.05
 5.03 Term -  97025  96828  198  2  0   42   45   156 0.302   3.12
 5.02 Intr - 101389 101262  128  2  2   66   24   118 0.568   2.68
 5.01 Init - 104168 104003  166  2  1   49  -18   232 0.716   8.54
 5.00 Prom - 108128 108089   40                              -2.25

 6.19 PlyA - 108320 108315    6                               1.05
 6.18 Term - 122337 122218  120  0  0   20   41    91 0.300  -4.91
 6.17 Intr - 123436 123302  135  1  0   70   75    83 0.586   5.04
 6.16 Intr - 141069 140834  236  1  2   46   93   128 0.116   5.58
 6.15 Intr - 145056 144978   79  0  1   80   77    38 0.055   0.11
 6.14 Intr - 149731 149666   66  1  0   64   97   103 0.990   6.98
 6.13 Intr - 150800 150657  144  2  0  133   75    49 0.951   7.66
 6.12 Intr - 150982 150917   66  1  0  123   58    66 0.944   5.28
 6.11 Intr - 151632 151416  217  2  1   75   59   202 0.560  13.58
 6.10 Intr - 170685 170573  113  0  2   91   37    92 0.190   2.66
 6.09 Intr - 188597 188551   47  0  2   79   91    38 0.010   0.41
 6.08 Intr - 193519 193418  102  2  0   81   50    59 0.124   0.63
 6.07 Intr - 201025 200773  253  1  1   76   46   266 0.996  17.28
 6.06 Intr - 211705 211596  110  2  2  107   92    27 0.555   4.08
 6.05 Intr - 211906 211797  110  0  2   46   17    82 0.456  -4.09
 6.04 Intr - 213418 213101  318  0  0   46   76   526 0.729  41.35
 6.03 Intr - 214406 214231  176  2  2   48   72   203 0.999  12.52
 6.02 Intr - 221393 221226  168  2  0   63   61    70 0.233   1.02
 6.01 Intr - 223728 223594  135  0  0   57   70    56 0.211   0.54

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 123909 123739  171  0  0   58  100    82 0.840   4.00


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:68101848_68325756|GENSCAN_predicted_peptide_1|103_aa
XNPVSEMFSAFPSYPVDIPNAMEEGFKQALQNLFQTHRCCWKVQELIHFEQNRKHIVIQV
PKNPVAIFNGDRHQSFNGGYHQEELLRASATQADGRSPGDKRD

>gi568815586r:68101848_68325756|GENSCAN_predicted_CDS_1|312_bp
ngaaacccagtatctgagatgttcagtgcctttcccagttacccagttgacatccccaat
gcaatggaagagggcttcaagcaggctcttcaaaaccttttccagactcatagatgctgc
tggaaggttcaggaactaattcactttgagcagaataggaaacatatagtgatccaagtt
cctaagaacccagtagccatttttaatggagacagacaccagagtttcaatgggggctac
caccaggaggagctcctgagagcctctgccacacaagctgatggtaggagcccaggtgac
aaaagagactga

>gi568815586r:68101848_68325756|GENSCAN_predicted_peptide_2|188_aa
MGDKGKNARELEASGTRKGSSGSGTAVHRACKTHLASGIWSRKGRAPWRLVRLWCGSFEE
KGWEHLDRDPNLGDKGGKCDFEESIYKRRGHHCLQLPGSAPEVMRESILARCCSNHSSRK
VISVILRGKMIMSLKLGFIGLATENLGGRSKLGLCLPLRCHDLRGWAAVIIPATFQRPLS
YPLLDLRK

>gi568815586r:68101848_68325756|GENSCAN_predicted_CDS_2|567_bp
atgggagacaaaggcaagaatgccagagaacttgaagcctctggcacacggaaaggatca
tcagggagtgggactgccgtgcatagggcttgcaaaactcacctagcttcagggatttgg
tcacgaaagggcagagcaccctggcggttggtgagactgtggtgtggcagttttgaggag
aaagggtgggagcatctagaccgtgatccaaatcttggagacaagggcggcaagtgtgat
tttgaggaatccatctataaaagacgaggccaccactgcctacagcttcctggaagtgcc
cctgaagtgatgagagaaagcatcctggccagatgttgcagcaaccacagcagtaggaaa
gtgatcagcgtaattctaagaggaaaaatgatcatgagtctcaagctgggcttcataggt
ctggccacagagaacctcggaggaaggtcaaaactaggtctctgtcttcctctgcgctgt
catgaccttcggggctgggctgctgtgatcatccctgccaccttccagagaccactctca
taccctctgcttgatctcagaaaatag

>gi568815586r:68101848_68325756|GENSCAN_predicted_peptide_3|166_aa
MKYTSYILAFQLCIVLGSLGCYCQDPYVKEAENLKKYFNAGHSDVADNGTLFLGILKNWK
EESDRKIMQSQIVSFYFKLFKNFKDDQSIQKSVETIKEDMNVKFFNSNKKKRDDFEKLTN
YSVTDLNVQRKAIHELIQVMAELSPAAKTGKRKRSQMLFRGRRASQ

>gi568815586r:68101848_68325756|GENSCAN_predicted_CDS_3|501_bp
atgaaatatacaagttatatcttggcttttcagctctgcatcgttttgggttctcttggc
tgttactgccaggacccatatgtaaaagaagcagaaaaccttaagaaatattttaatgca
ggtcattcagatgtagcggataatggaactcttttcttaggcattttgaagaattggaaa
gaggagagtgacagaaaaataatgcagagccaaattgtctccttttacttcaaacttttt
aaaaactttaaagatgaccagagcatccaaaagagtgtggagaccatcaaggaagacatg
aatgtcaagtttttcaatagcaacaaaaagaaacgagatgacttcgaaaagctgactaat
tattcggtaactgacttgaatgtccaacgcaaagcaatacatgaactcatccaagtgatg
gctgaactgtcgccagcagctaaaacagggaagcgaaaaaggagtcagatgctgtttcga
ggtcgaagagcatcccagtaa

>gi568815586r:68101848_68325756|GENSCAN_predicted_peptide_4|186_aa
MEYYAAIKRNEIMSFARTWMELFYYILYFSALVSVYQQVAFARTFVVTSDENSSHTILIK
ERISETGTQVLTGFVSLAVTSASLCETMSILPPTEQHSPAGREMQIKTTRYPHTHYEMAK
IWNTDNTKCWLRRGASGTLTEGMDLKTKENGWVHEGPDAGTSSEEVFLGPRGSERWPGVK
TEQAER

>gi568815586r:68101848_68325756|GENSCAN_predicted_CDS_4|561_bp
atggaatactatgcagccataaaaaggaatgagatcatgtcctttgcaagaacatggatg
gaacttttttattacatcctttatttttcggcattagtgtcagtataccaacaagttgca
tttgccaggacttttgtggtgacaagtgacgaaaattccagtcacactattttgatcaaa
gaaaggatctcagagacaggtactcaagtgttgacaggatttgtctctctagctgtcact
tctgcttctctttgtgagacaatgtcaatcctgcctcccacagagcagcattcaccagct
ggaagggaaatgcaaattaaaacaacaagatacccacacacccattatgaaatggcaaaa
atctggaacactgacaacaccaaatgctggctgagacgtggagcatcaggaactctgact
gaagggatggatctcaagacaaaggaaaatggttgggtgcacgaggggccagatgctgga
accagttctgaagaagtgttcctggggccaagaggatctgagaggtggccaggtgtgaag
actgaacaagctgagcgttaa

>gi568815586r:68101848_68325756|GENSCAN_predicted_peptide_5|163_aa
MDLGEIQELVDTAPQELAEDDLMEMSVSEPVPDDEEEDIEEAIPENKLTLDNWHKGDSCA
QIGFENSLAQSGLVVSPGQPAYKPAARDTSLLLLLISKKYMKLEPDHFNLPTDTSLEKVK
PRCSGFKMVSELPSFFPEMEGRKHTHPVSHSMVLMTVALDRGC

>gi568815586r:68101848_68325756|GENSCAN_predicted_CDS_5|492_bp
atggatcttggagaaattcaagagctagtagacactgcaccacaggaattagcagaagac
gacttgatggagatgagtgtttctgaaccagtgccagacgatgaggaagaagacatagaa
gaagcaatcccagaaaacaaattgacattagacaattggcataagggtgattcctgtgct
cagatagggtttgagaattcacttgcacaaagcggactggtagtttcccctggccagcca
gcctacaagccagctgctcgagatactagcctgctgcttctcctaatttcgaaaaaatat
atgaaattagaaccagatcattttaacctgcccacagataccagtttagaaaaagtcaag
ccacgatgttcaggtttcaaaatggtttcagagctcccgtcattttttccggagatggaa
ggacgaaagcacactcacccagtcagtcactccatggttctgatgactgtggctcttgac
agagggtgctag

>gi568815586r:68101848_68325756|GENSCAN_predicted_peptide_6|864_aa
LDRLLRKKAGLTVVPSYNALRNSEYQRQFVWKTSKETAPAFAANQVFHNKSQFVPPFKGN
SVIHETEYKRNFKGLSPVKEPKLRNDLRENRNLETVSPERKVKELREKAEFYRKRVQGTH
FSRDHLNQILSDSNCCWDVSSTTSSEGTVSSNIRALDLAGDPTSHKTLQKCPSTEPEEKG
NIVEEQPQKNTTEKLGVSAPTIPVRRRLAWDTENTSEDVQKQPGEKEEEDDNEEEGDRKT
GKQAFMGEQEKLDVREKSKADKMKEGSDSSVSSEKGGRLPTPKLRELGGIQRTHHDLTTP
AVGGAVLVSPSKMKPPAPEQRKRMTSQDCLETSKNDFTKKESRAVSLLTSPAAGIKTVDP
LPLREDSEDNIHKFAEATLPVSKIPKYPTNPPGQLPSPPHVPSYWHPSRRIQGSLRDPEF
QHNDEDRLSEISARSAASSLRAFQTLARAKKRKENFWDLSVVTYIQLTQRQFQIFFFPPG
KANHTVGGLECPVTFGDNLKPPRKENISSLCHQLLELELSAMAALQKSVSSFLMGTLATS
CLLLLALLVQGGAAAPISSHCRLDKSNFQQPYITNRTFMLAKEASLADNNTDVRLIGEKL
FHGVSMSERCYLMKQVLNFTLEEVLFPQSDRFQPYMQEVVPFLARLSNRLSTCHIEGDDL
HIQRNVQKLKDTVKKSFSSQLLVSLWQLMVTGQGCSPVLPKEAGKQTNTLTILVQQSWKP
KVTAIEAQKQALISLSGVVLQNQHALDVLTTKAGGTCVLLSETCCFYINTSGQIEESLKK
KNCQFQEQLLSFFMEDVFGQLQLQGCKKIRFVEDFHSLRQKLSHCPPAVVACRWYKGWVG
SLIAILGKPVGKELFILGIMVTET

>gi568815586r:68101848_68325756|GENSCAN_predicted_CDS_6|2595_bp
ttggatagacttctgcgtaagaaagctggattgactgttgttccttcatataatgccttg
agaaattctgaatatcaaaggcagtttgtttggaagacttctaaagaaactgctccagct
tttgcagccaatcaggttttccacaataaaagccagtttgttccaccattcaaaggtaac
tcagtcatccatgaaactgaatacaaaagaaatttcaagggtttatctccagtgaaagaa
ccaaaattaagaaatgatttgagagaaaacagaaatcttgaaacagtgtctcctgaaagg
aaggttaaagaactccgagaaaaggctgagttttataggaagcgagttcaggggacgcat
ttttctcgggaccatctgaatcagattttatctgatagcaactgctgttgggatgtctcc
tcaaccacaagctcagaaggaaccgttagtagcaacatcagagcattagatcttgctgga
gatcctacaagccataagactttgcagaaatgtccttctacagaaccagaagaaaaagga
aatatcgtggaagaacagccccagaaaaataccacggagaaattgggtgtgtcagctccc
accatacccgttagaaggcggctggcttgggatacagagaacacaagtgaagacgtacag
aaacagcccggggagaaagaggaggaggacgacaatgaagaggaaggggacaggaaaacg
ggcaagcaggcttttatgggagagcaagagaagttggatgtacgtgagaaatctaaggca
gataagatgaaagaagggtcagattcttctgtatcctcagaaaaaggaggccggcttcct
actcccaagctgagagaacttggtggaatccagaggactcatcatgatctcactactcca
gctgttggtggtgctgttttagtgtctccatctaagatgaagcctccagccccagaacag
aggaaaagaatgacctctcaggattgtttagaaacttcaaagaatgattttactaagaaa
gaaagtcgtgctgtatccctactgacttctccagctgctggtataaaaacagttgatcct
ctgcctttgcgggaagattctgaagacaatatccacaaatttgctgaggcaactcttcca
gtttcaaaaattccaaaatacccaacaaatccccctggacagttgccttctccaccacat
gttccatcctactggcatccctctcgacgaattcagggctctcttagagatccagagttt
cagcacaatgatgaggacagattgtctgagatttctgctcgctctgcagcttctagtctc
cgggcttttcaaactctggcacgagctaagaaaaggaaggagaatttctgggacctatca
gttgtgacctacattcagcttacccagaggcagtttcagatattcttctttcctcctggc
aaagctaaccatacggtcggaggacttgaatgcccagtgacgtttggtgacaatctgaag
ccaccaaggaaagaaaatatttcttctttgtgtcaccagttgctcgagttagaattgtct
gcaatggccgccctgcagaaatctgtgagctctttccttatggggaccctggccaccagc
tgcctccttctcttggccctcttggtacagggaggagcagctgcgcccatcagctcccac
tgcaggcttgacaagtccaacttccagcagccctatatcaccaaccgcaccttcatgctg
gctaaggaggctagcttggctgataacaacacagacgttcgtctcattggggagaaactg
ttccacggagtcagtatgagtgagcgctgctatctgatgaagcaggtgctgaacttcacc
cttgaagaagtgctgttccctcaatctgataggttccagccttatatgcaggaggtggtg
cccttcctggccaggctcagcaacaggctaagcacatgtcatattgaaggtgatgacctg
catatccagaggaatgtgcaaaagctgaaggacacagtgaaaaagtctttcagcagccag
cttctagtatctctctggcaattgatggtaactggccagggctgttctccggtgctgcct
aaagaagcaggaaaacagactaatacactcaccatcttagtccagcaatcttggaaacct
aaagtcacagccattgaggcccagaaacaggccctaatttcattgtcaggggttgtcctg
cagaatcaacatgctttagatgtgcttaccaccaaggcaggaggcacttgtgtgctgtta
agtgaaacctgctgcttttacatcaatacttcaggtcaaatagaagaaagtttaaaaaag
aaaaactgtcaatttcaagaacagcttctgtccttcttcatggaagacgtttttggtcaa
ctgcaattgcaaggctgcaagaaaatacgctttgtggaggactttcatagccttaggcag
aaattgagccactgtcctcctgcagttgtagcttgcagatggtacaaaggttgggttggg
agccttattgcaatccttgggaagccagttggaaaggagctcttcatcctgggcatcatg
gtcactgagacttaa