GENSCAN 1.0	Date run:  8-Nov-116	Time: 03:26:28

Sequence gi568815586f:22525164_22784951 : 259788 bp : 37.52% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 Intr -    542    447   96  0  0   69   92    57 0.683   3.26
 1.05 Intr -   2729   2558  172  2  1   30   91   195 0.867  12.59
 1.04 Intr -  10181  10095   87  2  0  114  107    43 0.995   8.05
 1.03 Intr -  19038  18898  141  0  0   52   73   158 0.880  10.33
 1.02 Intr -  19262  19157  106  1  1   81   79    67 0.866   4.40
 1.01 Init -  20861  20806   56  2  2   93   87    55 0.437   6.71
 1.00 Prom -  29956  29917   40                              -1.95

 2.00 Prom +  31890  31929   40                              -3.75
 2.01 Init +  33732  33776   45  2  0   82   72    45 0.713   3.03
 2.02 Intr +  42471  42647  177  2  0  125   61    89 0.129   9.09
 2.03 Intr +  45909  45993   85  2  1   32   73    75 0.064  -1.13
 2.04 Intr +  63797  63940  144  0  0   56   75    94 0.183   4.23
 2.05 Intr +  94439  94533   95  0  2   91   94    64 0.159   6.06
 2.06 Intr +  99014  99064   51  1  0   67  115    25 0.025   1.29
 2.07 Intr +  99983 100423  441  1  0   -3   97   308 0.010  15.33
 2.08 Intr + 118600 118859  260  0  2    5   88   214 0.009   8.44
 2.09 Intr + 124427 124459   33  2  0   97  115    24 0.727   2.42
 2.10 Intr + 133851 133991  141  0  0   71   93   103 0.443   7.65
 2.11 Intr + 140525 140549   25  2  1   57   83    35 0.262  -2.99
 2.12 Intr + 143435 143537  103  1  1   73   52    71 0.328   0.83
 2.13 Intr + 146109 146192   84  1  0  100   75    64 0.965   5.17
 2.14 Intr + 148337 148497  161  0  2   79  111   121 0.968  12.29
 2.15 Term + 149600 149632   33  1  0   68   45    19 0.344  -7.79
 2.16 PlyA + 149781 149786    6                               1.05

 3.04 PlyA - 149897 149892    6                               1.05
 3.03 Term - 152649 152460  190  2  1   13   36   160 0.682  -0.76
 3.02 Intr - 154143 153942  202  1  1   58   99   119 0.773   7.42
 3.01 Init - 154286 154226   61  2  1   45   97    85 0.979   6.56
 3.00 Prom - 158622 158583   40                              -5.15

 4.10 PlyA - 158909 158904    6                               1.05
 4.09 Term - 167323 167124  200  2  2   25   47   118 0.635  -2.02
 4.08 Intr - 168023 167873  151  2  1   70   65    79 0.654   2.61
 4.07 Intr - 168382 168141  242  2  2   71   45   240 0.755  14.35
 4.06 Intr - 173237 173124  114  0  0  102   94   -14 0.463   0.10
 4.05 Intr - 174662 174489  174  0  0   52   39   110 0.435   1.49
 4.04 Intr - 175811 175713   99  0  0   56   77    60 0.361   0.86
 4.03 Intr - 178521 178297  225  1  0   58   23   175 0.454   5.03
 4.02 Intr - 181463 181339  125  1  2   26   75   113 0.796   3.11
 4.01 Init - 186285 186176  110  0  2   63   44    86 0.735   1.44
 4.00 Prom - 194060 194021   40                              -2.25

 5.04 PlyA - 194407 194402    6                               1.05
 5.03 Term - 206469 206159  311  1  2   53   49   119 0.548  -1.26
 5.02 Intr - 216791 216729   63  0  0   95   92    51 0.478   3.97
 5.01 Init - 217118 217001  118  2  1   99   50    72 0.825   4.91
 5.00 Prom - 220866 220827   40                              -4.65

 6.00 Prom + 232395 232434   40                              -3.75
 6.01 Init + 252913 253040  128  0  2   95   59   130 0.882  10.48
 6.02 Intr + 255499 255581   83  1  2   74   84    63 0.246   2.86
 6.03 Intr + 258905 258994   90  0  0   89   84    33 0.077   2.05

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 118654 118859  206  0  2   98   88   141 0.934  13.47


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:22525164_22784951|GENSCAN_predicted_peptide_1|220_aa
MNSDFVDTGYTVNADFDICLVGPGRKNPSKPFLPPPLRNEVSAPARDSTLPPATTRLFVS
AGAQEEAETETMPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNP
QWNSEWFKFEVDDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWF
PIYDTIHGIRGEINVVVKVDLFNDLNRFRQSSCGVKFFCX

>gi568815586f:22525164_22784951|GENSCAN_predicted_CDS_1|660_bp
atgaactctgattttgttgatactgggtatactgtcaatgctgattttgatatttgcctt
gtggggccgggacggaagaacccatcaaagcccttcctcccgccgcctctccggaatgag
gtctcagcacccgcgcgggacagcacccttcctcctgcgacaactcgtttgtttgtttct
gcaggagcccaagaagaggccgaaaccgagaccatgccagggaagctgaaggtgaaaatc
gtggccgggcgccatttgccagtgatggaccgtgctagtgacctgactgatgccttcgtg
gaggtaaaatttggtaataccacctttaaaacagatgtgtaccttaagtcactcaaccct
cagtggaactcggagtggtttaaatttgaggtggatgatgaagacttacaagatgaacct
ttacagatcacagttcttgaccatgatacttacagtgcaaatgatgccattggtaaagtg
tacattgatattgatcctttactgtatagtgaagctgcaacagtcatctcaggatggttt
ccaatttatgacaccatacatggtatccgtggggaaatcaatgtagttgtcaaagtagac
ctcttcaatgatttaaatcgatttaggcagtcatcatgtggagtcaaattcttttgcann

>gi568815586f:22525164_22784951|GENSCAN_predicted_peptide_2|625_aa
MGSQPGNAMQYGKCWVGELRCRKEQTPLSRVYCAPLLRGGSAQVSKCGNQQEQTPCRPHG
SIQVGVPMTPRPQRIPIQGICEYRKVHLDMSSKDQLKLVSGGTSFITIPKGCVFRVCILG
NRMVARSTNNSSKIRMLLSMTVTKLNRAKRGTIVGSGNVAIDKLWLCFPGGNIPIHKRDT
KKFRKFTVIGEVIILLITKRQASPGMLCGRPRSSSDNRNFLRERAGLSSAAVQTRIGNSA
ASRRSPAARPPVPAPPALPRGRPGTEGSTSLSAPAVLVVAVAVVVVVVSAVAWAMANYIH
VPPGSPEVPKLNVTVQDQEEHRCREGALSLLQHLRPHWDPQEVTLQLFTDGITNKLIGCY
VGNTMEDVVLVRIYGNKTELLVDRDEEVKSFRVLQAHGCAPQLYCTFNNGLCYEFIQGEA
LDPKHVCNPAIFRYHTTLIAIALWLIARQLAKIHAIHAHNGWIPKSNLWLKMGKYFSLIP
TGFADEDINKRWWIGFELKIRYAIVAAMWRRTPCFLNALTGGLSHHLFTCTEPGDVQFID
YEYSGYNYLAYDIGNHFNEFAGVSDVDYSLYPDRELQSQWLRAYLEAYKEFKGFGTEVTE
KEVEILFIQVNQFALKADLDFLANF

>gi568815586f:22525164_22784951|GENSCAN_predicted_CDS_2|1878_bp
atgggctcacaaccaggaaatgcaatgcaatacggcaagtgctgggtgggagaacttagg
tgccgtaaggagcaaactccactctctcgggtctactgtgctccactcctcaggggaggg
agtgctcaagtgagcaagtgtgggaaccagcaggagcaaactccatgcaggccccacggc
agcatccaggttggggtgcctatgactccaaggccccagaggatacccattcagggaatc
tgtgaatatagaaaagttcacttggacatgagcagcaaggatcagctgaagttggtctca
ggtggcacttcattcattaccataccaaaagggtgtgtcttcagagtttgtatccttggg
aaccgcatggttgctaggtcgaccaataacagctctaagattcgcatgctgttgtccatg
actgttactaagctaaacagagccaaaagaggcactattgtaggcagtggaaatgtggca
atagacaagctgtggctctgctttcctggcggtaacattccaatacataagagggacact
aaaaagtttaggaagtttaccgttatcggtgaagtaattattttgttaattacaaagcgt
caggccagccccggcatgctctgcggccgcccgcggtccagctccgacaacaggaatttt
ctccgagagcgggccgggctcagttcagctgctgtccagacccggatcggcaacagtgcc
gcctccagacgttctcctgccgctcgcccgcccgtcccagcgcccccagccctcccgcga
gggcgccccgggacggaaggatccaccagtctgtcggcgcccgccgttctcgtggtcgcc
gtcgccgtcgtcgtggtggtagtctccgccgtcgcctgggccatggccaattacatccac
gtccctcccggctccccggaggtgcccaagctgaacgtcaccgttcaggatcaggaggag
catcgctgccgggagggggccctgagcctcctgcaacacctgcggcctcactgggacccc
caggaggtgaccctgcagctcttcacagatggaatcacaaataaacttattggctgttac
gtgggaaacaccatggaggatgtagtcctggtgagaatttatggcaataagactgagtta
ttagtcgatcgagatgaggaagtaaagagttttcgagtgttgcaggctcatgggtgtgca
ccacaactctactgtaccttcaataatggactatgctatgaatttatacaaggagaagca
ctggatccaaagcatgtctgcaacccagccattttcagatatcacactaccttaattgct
atagctttatggctaatagctcgtcagcttgctaaaatccatgctattcatgcacacaat
ggctggatccccaaatctaatctttggctaaagatgggaaagtatttctctctcattccc
acaggatttgcagatgaagacattaataaaaggtggtggattggatttgagctgaagatt
aggtatgccattgttgctgccatgtggcggcgcaccccgtgcttcttaaacgcactgact
ggaggtttatcgcatcacttgttcacatgcacggagcctggtgatgtacagttcattgat
tatgaatattctggatacaactacctggcatatgatattggaaatcatttcaatgaattt
gcaggtgtgagtgatgtagactatagtctgtatccagatagagaactacagagtcagtgg
ctgcgtgcttaccttgaagcctacaaagaatttaagggctttgggactgaagttactgaa
aaggaggtagaaatactcttcattcaagtcaatcagtttgcattgaaagctgatttggat
ttccttgcaaacttttga

>gi568815586f:22525164_22784951|GENSCAN_predicted_peptide_3|150_aa
MSAGIIQLAASTAKTKQAEEESKFFSIWTLGLKRQWFARGLLGLWPQTEGSTVGSSGFET
FKLVLRHYWLLSSSACRRPTVRLQLVIRQTESQIMSELPFTIAAKRIKCPGIQRTRDVKD
LFKENYKTTDQGNKRTCTNGKTFHAHRYEE

>gi568815586f:22525164_22784951|GENSCAN_predicted_CDS_3|453_bp
atgtcggctggtatcatccaattggctgccagcacggcaaaaacaaagcaggcagaagaa
gaatccaagttcttcagcatttggacacttggacttaaacgccagtggtttgccaggggg
ctcttgggcctttggccacagactgaaggcagcactgtcggctcttctggttttgagact
ttcaaacttgtactgcgccactactggcttctttcttcctcagcgtgcagacggcctact
gtgagacttcaacttgtgatcagacaaacagagagccaaatcatgagtgaactcccattc
acaattgctgcgaagagaattaaatgcccaggaatacaacgtacaagggatgtgaaagac
ctcttcaaggagaactacaaaaccactgatcaaggaaataagaggacatgcacaaatgga
aaaacattccatgctcatagatacgaagaataa

>gi568815586f:22525164_22784951|GENSCAN_predicted_peptide_4|479_aa
MTEIKNTRQKGFEVSTGFQIDICGKLLEVWDWSTRERKTYGVLQKVKPIGYVCLSVKSSN
QYVLEVNVSEWKLFGEEGGCYFKLVDCVDNHDPSFLAVKHHHLASMLQSTIISNATHEKR
SVIASPTYSTGLQRTVTEPLGWWLFHQLIPDGHGTTASTSKIVTGQGQPQRQEWLDISKS
KNWLDIDANPSRAKLSGVSLYTDANPSRAKLSGVSLYTDANPSRAKLSGVSLYTDANPSR
AKLSVRYSGLTRINKRKTKFHSTFTKTGAISNPPLILHLYCKVPTLAALEEPFRPPLHCG
SPSLGWPEPAPSACREVWKQRHWWEPRLRVAHVALTGQREFQMGMGSAGPALRAAGQRRQ
PWAGRARDLQSTTPKPPPPQTPWAPAQTEPPRQAPPPAQQCPVPSTAQGLRSVGRSAASL
LKPVRPGTHQKEGTPNTSEHQKEQTPDTPSLRTVTLTAKVRGFILEVSETKNPPISDTM

>gi568815586f:22525164_22784951|GENSCAN_predicted_CDS_4|1440_bp
atgacagagatcaagaatacaagacagaaaggttttgaagtatctacaggattccagatt
gacatatgtggaaagctgttggaagtttgggactggagcacaagagaaagaaagacctat
ggagttttacagaaggttaagccaattggttacgtgtgccttagtgtcaagtcctcaaat
caatatgtacttgaggtcaatgtcagtgaatggaaattatttggagaggagggaggctgt
tacttcaagcttgttgattgtgttgataatcatgacccctcatttctggcagttaagcac
caccatctggcctctatgcttcagagcactatcatttccaatgctacccatgagaaacgt
tctgtgatagcctctcctacctacagcactggcttacagagaactgtcactgaacctctt
ggctggtggctctttcatcagcttattcctgatggccatggtacaacagcatcaactagc
aaaattgtcacggggcagggccagccccagaggcaggagtggttggatatatccaagtct
aagaattggctggatattgacgctaatcctagcagggcgaagctctcaggtgtctctctt
tatacagacgctaatcctagcagggcgaagctctcaggtgtctctctttatacagacgct
aatcctagcagggcgaagctctcaggtgtctctctttatacagacgctaatcctagcagg
gcgaagctctcagtgagatactcagggttgacaaggataaacaagagaaaaactaaattc
cattcaacctttacaaagactggtgcaattagcaacccccctctcatccttcatttgtat
tgcaaagtgcccactctggccgcgcttgaggagcccttcaggccgccgctgcactgtggg
agcccctctctgggctggccagagccggctccctctgcttgccgggaggtgtggaagcag
aggcactggtgggaacccaggctgcgtgtggcccacgtggccctcacgggccagcgcgag
ttccagatgggcatgggctcggcgggccccgcactccgagccgccggccagcgccgccag
ccctgggcaggcagggctcgggacctccagtccaccacgcccaagcctcccccaccccaa
accccgtgggctcccgcgcagaccgagcctccccgacaggcaccgccccctgctcagcag
tgtccagtcccatccaccgcccaagggctgaggagtgtgggaaggtctgctgcttcactc
ctgaagccggtgagaccaggaactcaccagaaggaaggaactccaaacacgtctgaacat
cagaaggaacaaactccggacacaccatctttaagaactgtaacactcactgcaaaggtg
cgtggcttcattcttgaagtcagtgagaccaagaacccaccaatttcggacacaatgtga

>gi568815586f:22525164_22784951|GENSCAN_predicted_peptide_5|163_aa
MAVIPMKLKMLSNRLPLFENIDCFRVRVTESIQVGYWPRVAQIVSDSSRAWATSLRCQSR
VFSYRQIRGGQWAQVVPGGHRPVLIEYTKHHNKDDYTDHLKPFKSVSFGIETWIESERMN
EILQADRREEKDSSNKDNSMLKPKQMNGMGGLVTVADTWLEGR

>gi568815586f:22525164_22784951|GENSCAN_predicted_CDS_5|492_bp
atggccgtcataccaatgaagctcaagatgctgtcaaatagattgcccctttttgaaaat
attgattgtttcagggtcagagtgactgaatctattcaagtaggctactggcccagagta
gctcagattgtcagtgacagctccagggcttgggccacaagcctcaggtgccaatcaaga
gtcttctcatatagacaaattaggggtgggcaatgggctcaggtcgtgcctggtggtcat
aggcctgttctaatagagtacactaagcatcataataaagatgactacacagatcacttg
aaaccattcaagtcggtgagttttggaatagaaacttggattgagtcagaaagaatgaat
gaaattctccaggctgacaggagggaggagaaagattcctcaaacaaagacaatagcatg
ctcaaacctaaacaaatgaatggcatgggtggcctggtcactgtggctgacacatggctt
gaaggccgatga

>gi568815586f:22525164_22784951|GENSCAN_predicted_peptide_6|101_aa
MDMKGPEAQVRGESSTCLKNTLEKLAACTGLVLTQCGAKICQSFSRAVEDRKKKSPFLED
FDSKRFPMSTGCFWAQFLKNSSQVRNNSGKDWGSISGNRSX

>gi568815586f:22525164_22784951|GENSCAN_predicted_CDS_6|303_bp
atggacatgaaagggccagaggcacaggtgaggggagagagcagcacctgcctgaagaat
acacttgagaaactggctgcatgcacaggccttgttcttacacagtgtggggctaagatc
tgccagagttttagcagggccgtagaagacaggaaaaagaaatcacccttcttagaagat
tttgattcaaaaagatttcctatgtccactggttgtttctgggcccagtttctgaaaaac
tcttcccaggtgagaaataatagtggcaaagactggggcagtatctcagggaataggtca
gnn