GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:47:21

Sequence gi568815586r:15009113_15317489 : 308377 bp : 36.85% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   4558   4730  173  2  2   41   55   133 0.345   2.31
 1.02 PlyA +   5930   5935    6                               1.05

 2.04 PlyA -   7452   7447    6                               1.05
 2.03 Term -  28145  28012  134  0  2   30   32   181 0.730   3.97
 2.02 Intr -  29348  29268   81  0  0   71   91    57 0.064   2.99
 2.01 Init -  56551  56410  142  1  1   76   87    86 0.251   5.99
 2.00 Prom -  65271  65232   40                              -6.35

 3.00 Prom +  67499  67538   40                              -3.65
 3.01 Init +  68688  68903  216  2  0   79   63    61 0.137   1.48
 3.02 Term +  86230  86460  231  0  0    9   42   245 0.236   7.49
 3.03 PlyA +  87021  87026    6                               1.05

 4.02 PlyA -  87251  87246    6                              -3.84
 4.01 Sngl -  87741  87262  480  0  0   67   39   275 0.970  16.33
 4.00 Prom -  98790  98751   40                              -6.25

 5.04 PlyA -  98963  98958    6                               1.05
 5.03 Term - 100405  99998  408  1  0  106   48   346 0.748  26.63
 5.02 Intr - 119975 119811  165  2  0   77   86   148 0.579  12.74
 5.01 Init - 127958 127854  105  2  0   28   75    87 0.669   1.67
 5.00 Prom - 129060 129021   40                              -6.15

 6.00 Prom + 131106 131145   40                              -6.15
 6.01 Init + 133270 133279   10  0  1   90   49     0 0.660  -3.09
 6.02 Intr + 134877 135007  131  1  2   22   76   178 0.723   9.49
 6.03 Intr + 136420 136588  169  0  1    6   62   157 0.575   3.50
 6.04 Intr + 157255 157467  213  2  0   53   42   206 0.121  10.26
 6.05 Intr + 160395 160516  122  1  2   90   58    76 0.144   4.09
 6.06 Intr + 166349 166422   74  1  2   83  103   -17 0.078  -3.41
 6.07 Intr + 172614 172753  140  0  2   88   70   122 0.450   9.59
 6.08 Intr + 186980 187097  118  0  1  113   90    52 0.048   6.50
 6.09 Intr + 197411 197498   88  2  1   29   59    66 0.004  -3.15
 6.10 Intr + 201708 201740   33  2  0  138   91    12 0.184   4.00
 6.11 Intr + 211895 212219  325  1  1   58   35   260 0.130  12.12
 6.12 Intr + 217338 217421   84  1  0   93   47    55 0.230   0.77
 6.13 Intr + 234539 234651  113  0  2   65   55   103 0.032   3.88
 6.14 Intr + 242846 242927   82  1  1   68   77    45 0.005  -0.31
 6.15 Term + 244196 244329  134  0  2   79   37   104 0.775   1.67
 6.16 PlyA + 245660 245665    6                               1.05

 7.00 Prom + 256580 256619   40                              -5.25
 7.01 Init + 263480 263637  158  1  2   69   81   134 0.440  10.23
 7.02 Intr + 270933 271050  118  0  1   75   53   137 0.156   8.45
 7.03 Intr + 272111 272245  135  1  0   62   93    33 0.287   1.04
 7.04 Term + 286892 286900    9  1  0  154   45     0 0.176  -0.48
 7.05 PlyA + 287637 287642    6                               1.05

 8.04 PlyA - 289104 289099    6                               1.05
 8.03 Term - 291073 290755  319  0  1   83   44   154 0.146   3.87
 8.02 Intr - 291591 291165  427  1  1   24   60   208 0.085   3.52
 8.01 Init - 296885 296597  289  2  1   90   44   228 0.100  15.92

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 183216 183059  158  1  2   17   54   210 0.873   7.61
S.002 Sngl - 296885 296448  438  2  0   90   43   265 0.894  18.21


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:15009113_15317489|GENSCAN_predicted_peptide_1|57_aa
XPYKLNLQQSSKALREREVSEAQENLQLREHQKMARKGRSELTVTGQGLSESHKEIG

>gi568815586r:15009113_15317489|GENSCAN_predicted_CDS_1|174_bp
nctccttataaattgaacttgcagcagtctagcaaggcattgagagaacgagaggtgtct
gaagctcaggaaaatctgcagctcagagagcatcagaaaatggctagaaagggtaggtct
gaactgactgtcacagggcagggactttcagagagtcacaaggagattggatga

>gi568815586r:15009113_15317489|GENSCAN_predicted_peptide_2|118_aa
MPNVQRLEDLLTCLAHHCHYWHLSKLPECPRISMQGPANPVSAYTTSAQSQMPTGVLPGG
CCHRSFTTRPHLTVAGKVNALGGYKFGVSAGKALVATCLLFGGPRLQRWIQKPAQVAA

>gi568815586r:15009113_15317489|GENSCAN_predicted_CDS_2|357_bp
atgcctaatgtccagaggctggaggacttgctcacctgcctggctcaccactgccactac
tggcacctgagcaagctccctgaatgcccgagaatcagcatgcaaggacctgctaatcca
gtgtcagcatacaccacttcagcccagtctcagatgcccactggggtgcttcctggtggc
tgctgccataggtcttttactaccagacctcacctaactgttgcaggcaaggtgaacgca
ctgggtggttacaaatttggcgtgtcagccgggaaagctcttgtggctacctgcctgttg
ttcggtggcccccgactccagcgatggatccagaagccagcccaagtggctgcctag

>gi568815586r:15009113_15317489|GENSCAN_predicted_peptide_3|148_aa
MKIRKFFELNYYSVTTYQSLWETAKAVLRGKCIALNAYIRKSERAQTGNLKSHLKELEKQ
EPTKPKPRRRKEEQWEAFSRIGSSNGRLTGSGAQQTPCRIQRDGSQWRVCDGGKQQWWTA
SESSARAVTNTDQKSAVARFNRVKTELL

>gi568815586r:15009113_15317489|GENSCAN_predicted_CDS_3|447_bp
atgaagattagaaaattctttgaactgaactactatagtgtcacaacctatcaaagcctc
tgggagacagcaaaggcggtgctaagaggaaagtgcatagccctaaacgcctacatcaga
aagtctgaaagagcacaaacaggcaatctaaagtcacacctcaaggaactagagaaacaa
gaaccaaccaaacccaaacccaggagaagaaaggaagaacaatgggaagcctttagccgg
atagggagcagcaatgggcgccttactggatcaggagcacagcagacaccctgccggatc
cagagggatggaagtcagtggcgggtctgcgacggtggcaaacagcagtggtggacggct
agtgaaagctcagctcgagctgtaacaaacacggaccagaagagtgcagttgcaagattt
aatagagtgaaaacagagctcttataa

>gi568815586r:15009113_15317489|GENSCAN_predicted_peptide_4|159_aa
MNSRWIKDLHVRPKTIKTLEENQGNAIQAIGMGKGFMSKTPKAMATKAKIDKWDLIKLKS
SCTAKETTIRVNGQPIEWEKIFAIYSSDKGLISRICKELKQISKEKTNQLHQKVGKGYEQ
PLLKRRRLCSQKTHEKMLIITGHQRNANQNRNEIPSHTS

>gi568815586r:15009113_15317489|GENSCAN_predicted_CDS_4|480_bp
atgaattcaagatggattaaagacttacatgttagacctaaaaccataaaaaccctagaa
gaaaaccaaggcaatgccattcaggccataggcatgggcaagggcttcatgtctaaaaca
ccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagc
tcctgcacagcaaaagaaactaccatcagagtgaacgggcaacctatagaatgggagaaa
atttttgcaatctactcatctgacaaagggctaatatccagaatctgcaaagaactcaaa
caaatttccaaggaaaaaacaaaccaactccatcaaaaagtgggcaaaggatatgaacag
ccacttctcaaaagaagacgtttatgcagccaaaaaacacatgaaaaaatgctcatcatc
actggccatcagagaaatgcaaatcaaaaccgcaatgagataccatctcacaccagttag

>gi568815586r:15009113_15317489|GENSCAN_predicted_peptide_5|225_aa
MCEVKPDGTLRRNRRIRHYSWRLQHLAIRNGEIQQAGTHSVLGSHTSHLLLRHNDPYFLE
ETRTVTEKRVRTAVKKNMNLRVGDRRPRNKEDTIQREGHMRWGEGFVLVYDITDRGSFEE
VLPLKNILDEIKKPKNVTLILVGNKADLDHSRQVSTEEGEKLATELACAFYECSACTGEG
NITEIFYELCREVRRRRMVQGKTRRRSSTTHVKQAINKMLTKISS

>gi568815586r:15009113_15317489|GENSCAN_predicted_CDS_5|678_bp
atgtgtgaggtaaaacctgatggaactttaaggagaaatagacgaatccgccattatagt
tggagacttcaacaccttgctatcagaaatggagagatccagcaggccgggactcactcg
gtcctgggatctcatacttcacatctccttctgaggcacaatgacccatatttcttggag
gagaccagaacggtcacagaaaagagagtaaggactgctgtaaaaaagaacatgaacttg
agggttggtgatagaagacccaggaacaaggaagataccattcagagggaggggcacatg
cgatggggggaaggctttgtgctggtctacgacattactgaccgaggaagttttgaggaa
gtgctgccacttaagaacatcctagatgagatcaaaaagcccaagaatgtgactctcatc
ttggttggaaacaaagctgacttggaccactccaggcaggttagcacagaagaaggagag
aagctggccacagaattggcttgtgctttttacgagtgctctgcctgcactggagaaggg
aacatcacagagatattctatgaattgtgtcgagaggtgcgtcgccggaggatggtgcag
ggcaagacgaggcgacgcagctccaccacgcatgtcaagcaagccattaacaagatgctc
accaaaatcagtagttag

>gi568815586r:15009113_15317489|GENSCAN_predicted_peptide_6|611_aa
MGTGTGGHQCGWNGEHKVGQVEEEEVSEEVKKGVEYERKRGVKDDSKLPGSESVAGVPSV
TGPVHVLQSDKGISTAGVLRCLSGWQHRGAAVPDQMMKTSSARRVMQKEWENKNFSVSFL
ILGLWTSHQGTLSFSLMIIDDDDDDDDDGDGGDGGDGGGGGGSGVGGGVGGGGGGLRHRL
ESTPSVDLSWASSLQTAGLQNQISRSVEPHSLCHHGFKISQRLETGAVSGLYWAYTQPCI
GRRQTTKACWGGYVYIDEERVKNGEKKVRSEVTHRTKWKIPAGHCKGHLKSEKGISIPLQ
VSMGKLCLVNNLLNWIHVKSNEKAVRLAASASLKNLLEIQILWLRCRPTESEPVEVKEDT
NPVKPQLGEPCQDRLLVFTSPSQRTPKPPWEENPVTKRTDSEAERAQGSEWVCRKSSRKS
CLDTCVTLTCSHSPGQESYGPLQVRNGSPKIAKPSHTAQPRLQVAFASCWAAVVGTWMEL
EIIILSELSQERKTKHRIFPLIDLFRICSAQVTLVVHMALNRRALFLIGSNLSRSGDEEE
LKWLVSKRLGIMDAGKDGESEEPLYTVEEEENKEEEKEEENCEDKEESYTERQLAIFFFT
RFREAGTFFIS

>gi568815586r:15009113_15317489|GENSCAN_predicted_CDS_6|1836_bp
atgggtacaggaacaggaggccaccagtgtggctggaatggagagcacaaagtagggcaa
gtggaagaagaagaggtgagtgaggaggtgaagaagggtgtggagtatgagaggaaaaga
ggagtgaaggatgactccaagctccctggctctgagagtgtcgcaggtgtgccatcagtc
acgggacctgtgcacgtgctgcaatctgacaaggggatttcaacagcaggtgtgctcagg
tgcctcagtggatggcagcacagaggggcagctgtgcctgaccaaatgatgaagacttcc
agtgctaggcgtgttatgcaaaaagaatgggaaaataagaatttcagtgtctccttttta
attttgggactctggacaagtcaccaaggcactctgagcttcagtctcatgataattgat
gatgatgatgatgatgatgatgatggggatggtggtgatggtggtgatggtggtggtggt
ggtggtagtggtgttggtggtggtgttggtggtggtggtggtggcctcagacacagactg
gaatctacaccatctgtggacctttcctgggcctccagcttgcagacagcaggtctgcaa
aatcagatcagcagatctgtggaaccacacagcctctgccatcatggcttcaagatcagc
caaagactagagactggggccgtctcaggtctttactgggcatacacacaaccttgcata
ggaagaaggcaaacgactaaagcctgctggggtggttacgtttatattgatgaggagaga
gtaaagaatggagaaaagaaagtgagaagtgaggtcacacatagaaccaagtggaaaata
cctgcagggcattgcaaaggccatttaaaatctgagaaaggcatttctattcctcttcaa
gtttccatgggtaagctctgcctggtcaacaatttgttgaactggattcatgttaagtca
aatgagaaagcagtcagactagcagcatcagcatcactgaagaacttgttagaaatacaa
attctctggcttcggtgcagacctactgagtcagaacctgtggaggtaaaggaagataca
aaccctgtaaagccacagctaggagagccctgtcaagataggctgctggtgttcacatct
ccctcgcagcgaaccccaaagccgccctgggaggagaacccggtgaccaagaggaccgac
tcagaggccgagcgcgctcagggctcggaatgggtctgcaggaagtcgtcccgaaagagc
tgcctggacacgtgcgtgacactcacctgttcacactctccaggccaggagagctacggt
cctctgcaagttcggaatgggtcccccaagatcgcgaagccctcccacactgcgcagccc
aggcttcaggttgcgtttgcgagttgctgggctgcggtcgtggggacatggatggaattg
gaaatcatcattctcagtgaactatcgcaagaacgaaaaaccaaacaccgcatattccca
ctcatagatcttttccgcatctgctctgcccaggtgactcttgtagttcacatggccctg
aacagaagggctctgtttcttattggctctaacctttctagatctggggatgaagaagag
ttaaaatggcttgtatcaaaaagactgggcataatggatgctggaaaggatggggagtca
gaggaacccttgtacactgttgaggaggaggagaacaaagaagaagaaaaggaagaagaa
aactgtgaggacaaagaggaaagctacacagaaagacagctcgcaattttttttttcaca
agatttagagaagctggaacattctttatctcctag

>gi568815586r:15009113_15317489|GENSCAN_predicted_peptide_7|139_aa
MFRRLQASYWTVWKQKQNKIRGNRSEKAGTNNKQKLPETSSRSAASILYKGVWPVHSSTS
RCDCSRGLPPYQDMTGKIVLIPQVSYGLWQTEKRKSHWQPLWQVLDHTGMLDIAHFPPSC
SNELNRMTLTKSISMWKAM

>gi568815586r:15009113_15317489|GENSCAN_predicted_CDS_7|420_bp
atgttcagaagactacaagcctcttattggacagtctggaaacagaagcaaaataaaatt
cggggaaatagaagtgaaaaagctggcacaaataacaagcaaaagcttccagaaacatca
tcccgttcagctgcatccatcctgtacaaaggagtctggccagtgcactcatcaaccagt
cgctgtgactgttccagaggattgccaccttaccaggacatgactggaaaaattgtacta
atcccacaagtgtcctatggcctgtggcagactgaaaaaaggaagagccattggcagcca
ttatggcaggttttggaccatacaggaatgcttgacattgcacattttcctccaagttgt
agcaatgagttaaaccgcatgaccctcacaaagagtatttcaatgtggaaggccatgtag

>gi568815586r:15009113_15317489|GENSCAN_predicted_peptide_8|344_aa
MTLPSELNKASGTDPGKTEICDCSERECKIAVLRKSKEIQDNTEKEFRILLDNLNKEIET
VKKNQAEILELKNVIGILKSASQSFNKTTDQVEERLSRSWNSLEDSEEDRKIWESLETPR
DLLNGFNQNADSDMDNEVQAEVVSGDKKLAGDWSKCHSCYALAKRLEAFFPCPRDLWNFE
LKRDDLEYLVGEISKKQSLEIQEVTEHKSLENLQPDNAVENKNPIFWGEIQAGCRNLDKP
GGLGGKNGFLGCPLPCCVQPQSLALCAPAAPAMAKQGQGTAQAVASEGASLKPWQLSCGV
GPTGAQRTRIEVWDPLPRFQMMYGNTWKSRLNSSARAEPLVENL

>gi568815586r:15009113_15317489|GENSCAN_predicted_CDS_8|1035_bp
atgaccttaccaagtgaactaaataaagcatcagggactgatcctggaaaaacagagata
tgtgactgttcagaaagggaatgcaaaatagctgtgttgaggaaatctaaagaaattcag
gataacacagagaaggaattcagaattctattagataatttaaacaaagaaattgaaaca
gtgaaaaagaatcaagctgaaattctggagctgaaaaatgtaattggcatactgaaaagt
gcatcacagtcctttaataaaacaacggatcaagtagaagaaagactcagcagaagttgg
aacagtttggaggactcagaagaagacaggaaaatatgggaaagtttggaaactcctaga
gacttattgaatggctttaaccaaaatgctgatagtgatatggacaatgaagtccaggct
gaggtggtctcaggagacaagaaacttgctggggactggagtaaatgtcattcttgctat
gctttagcaaagagactggaggcttttttcccctgccctagagatctgtggaactttgaa
cttaagagagatgatttagaatatctggtgggagaaatttctaagaagcaaagcttagaa
attcaagaggtgacagagcataaaagtttagaaaacttgcagcctgacaatgcagtagaa
aacaaaaatcccattttctggggagaaattcaagctggctgcagaaatttggataagcct
ggaggcctaggagggaaaaatggttttctgggatgccctctcccctgttgtgtacagcct
cagagcttggcgctctgtgccccagctgctccagccatggctaaacagggccaaggtaca
gctcaggctgttgcttcagagggtgcaagcctcaagccttggcagctttcatgtggtgtt
ggtcctacaggtgcacagaggacaagaattgaggtttgggatcctctgcctagatttcag
atgatgtatggaaacacctggaagtccaggctgaactcttctgcaagggcagagcccctt
gtggagaacctctga