GENSCAN 1.0	Date run:  6-Nov-116	Time: 14:55:50

Sequence gi568815586r:12840778_13050384 : 209607 bp : 44.16% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   9404   9443   40                              -2.66
 1.01 Sngl +  10088  10927  840  1  0   86   49   518 0.697  43.45
 1.02 PlyA +  11579  11584    6                               1.05

 2.00 Prom +  17331  17370   40                              -6.16
 2.01 Sngl +  34722  35333  612  2  0   96   52   956 0.890  87.00
 2.02 PlyA +  35338  35343    6                               1.05

 3.08 PlyA -  38968  38963    6                               1.05
 3.07 Term -  45062  45006   57  2  0   87   44    67 0.068  -0.11
 3.06 Intr -  49939  49852   88  0  1  118   18    41 0.171   0.07
 3.05 Intr -  50939  50721  219  1  0   84   72   110 0.639   6.42
 3.04 Intr -  52111  52029   83  1  2  104   64    68 0.906   4.44
 3.03 Intr -  59694  59659   36  0  0  121  108   -21 0.688   1.66
 3.02 Intr -  60601  60483  119  2  2   99  107   -41 0.350  -0.92
 3.01 Init -  63433  63280  154  1  1   58   63    86 0.474   3.24
 3.00 Prom -  65881  65842   40                              -4.16

 4.00 Prom +  65909  65948   40                             -11.14
 4.01 Init +  67473  68394  922  2  1   75   87   990 0.962  91.74
 4.02 Intr +  71307  71365   59  1  2  133  111    66 0.999  12.00
 4.03 Intr +  72746  72771   26  1  2   58   84    60 0.252  -0.58
 4.04 Intr +  86927  87026  100  2  1   97  103    19 0.131   4.41
 4.05 Term +  94590  94688   99  2  0   45   37   122 0.475   0.93
 4.06 PlyA +  94746  94751    6                               1.05

 5.05 PlyA -  95625  95620    6                               1.05
 5.04 Term - 100072  99998   75  1  0  105   35    27 0.173  -3.06
 5.03 Intr - 101551 101484   68  2  2  109   99    41 0.621   5.92
 5.02 Intr - 103159 103109   51  2  0  141   19    33 0.254   0.58
 5.01 Init - 109607 108713  895  2  1   86   73   786 0.487  71.40
 5.00 Prom - 110677 110638   40                              -4.26

 6.05 PlyA - 116413 116408    6                               1.05
 6.04 Term - 134702 134531  172  1  1   88   48   297 0.991  23.00
 6.03 Intr - 146555 146375  181  0  1  137   75   126 0.882  15.13
 6.02 Intr - 148638 148500  139  0  1  131   96   236 0.984  28.74
 6.01 Init - 154289 154230   60  2  0   84   61    18 0.258   0.15
 6.00 Prom - 158340 158301   40                              -3.56

 7.00 Prom + 160319 160358   40                              -7.96
 7.01 Init + 160725 160790   66  2  0   82   59    64 0.211   4.06
 7.02 Intr + 161053 161258  206  0  2   25   82   436 0.819  34.70
 7.03 Intr + 161502 161610  109  0  1   62   29    98 0.673   1.59
 7.04 Term + 161760 162053  294  2  0   75   42   165 0.775   5.91
 7.05 PlyA + 162078 162083    6                               1.05

 8.00 Prom + 175276 175315   40                              -2.46
 8.01 Init + 180554 180879  326  1  2   80   67   144 0.467   8.32
 8.02 Intr + 196030 196088   59  1  2  117   70    33 0.456   2.93
 8.03 Intr + 203553 203663  111  1  0   49   90   138 0.333  10.45

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  22511  22416   96  1  0   95   74    76 0.856   6.02


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:12840778_13050384|GENSCAN_predicted_peptide_1|279_aa
MVESKGGARHVLHGGKQERSRGELPLESHQVLEAFSCFKMKLNISFPVTGCQKLIEVDDE
CKLRTFYEKLMATEVAADTLGEEWKGYVVRISGGNNKQGFPMKQGVLTHGRVHLLLSKGH
SCYRPRRTGERKRKSVRGCIVDANLSILNLIIVKKKKKVKKDIPGLTDTMVPCRLGPKKA
SRICKLSNLSEEDDVRQYVVRKPSNKGGKKPRTKAPKIQHLVTPHFLQHKGQHIALKKPC
TKKNKEEAAEYAKLLGKGMKEAKEKRQEQIAKRHRLSSL

>gi568815586r:12840778_13050384|GENSCAN_predicted_CDS_1|840_bp
atggtggaaagcaaaggaggagcaaggcatgtcttacatggtggcaagcaagagagaagt
agaggggaactccctttagaaagccatcaggtcttggaggcattcagctgcttcaagatg
aagctgaacatctccttcccggtcactggctgccagaaactcattgaagtggatgatgaa
tgcaaacttcgtactttttatgagaagcttatggccacagaagttgctgctgacactctg
ggtgaagaatggaaaggttatgtggtccgaatcagtggtgggaacaacaaacaaggtttt
cccatgaagcagggtgtcttgacccatggccgtgtccacctgctactgagtaaggggcat
tcctgttacagaccaaggagaactggagaaagaaagagaaaatcagttcgtggttgcata
gtggatgccaatctgagcattctcaacttgattattgttaaaaaaaaaaaaaaagtaaag
aaggatattcctggactgactgatactatggtgccttgtcgcctggggcccaaaaaagct
agcagaatctgcaaactttccaatctctctgaagaagatgatgtccgccagtatgttgta
agaaagccctcaaacaaaggaggtaagaaacctaggaccaaagcacccaagattcagcat
cttgttactccacatttcctgcagcacaaagggcagcatattgctctgaagaagccgtgt
actaagaaaaataaggaagaggctgcagaatatgctaaacttttaggcaagggaatgaag
gaggctaaagagaagcgccaggaacaaattgcgaagagacacagactttcctctctgtga

>gi568815586r:12840778_13050384|GENSCAN_predicted_peptide_2|203_aa
MAEVQVLVLDGRGHLLGHLAAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLKYLAFLRK
RMNSNPSRGPYPLQAPSRIFWQTMRGMPPHKTKPGQAALDCLKVFDGIPPPYDKKKRMVV
PAALKVVRLKPARKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQFMRLWKQ
AEKNVEKKIDKYTEVLKTHGLLV

>gi568815586r:12840778_13050384|GENSCAN_predicted_CDS_2|612_bp
atggcggaggtacaggtcctggtgcttgatggtcgaggccatctcctgggccacctggcg
gccatcgtggctaaacaggtactgctgggccggaaggtggtggttgtatgctgtgaaggc
atcaacatttctggcaatttctacagaaacaagttgaagtacctggctttcctccgcaag
cggatgaacagcaacccttcccgaggcccctaccccctccaggcccccagccgcatcttc
tggcagaccatgcgaggtatgccgccccacaagaccaagccaggccaggccgctctggac
tgcctcaaggtgtttgacggcatcccaccgccctacgacaagaaaaagcggatggtggtt
cctgctgccctcaaggttgtgcgtctgaagcctgcaagaaagtttgcctatctggggcgc
ctggctcacgaggttggctggaagtaccaggcagtgacagccaccctggaggagaagagg
aaagagaaagccaagatccactaccggaagaagaaacagttcatgaggctatggaaacag
gccgagaagaacgtggagaagaaaattgacaaatacacagaagtcctcaagacccacgga
ctcctggtctga

>gi568815586r:12840778_13050384|GENSCAN_predicted_peptide_3|251_aa
MRALPGYTVNVEEEDPISFKGGERKELRPCALHCVSPHPGRLITRVLSSRKGCQKLHFGS
EIRSAWPCLNPAPILVAAGGSQESMNPEVLLGEGVSAARLCEQPIVSEVAEVFPFRNEPT
AVADSAEPFNRRFKSGGPSALGSWRLTYPSAKALAVNLVLLPARKRAAGELLSAGGDLGQ
LSRPRTLSSCYKGGPRRREGTSEGIKPIGPKLVFVYVWNDPGVAARLCRGSSQQQYTFEM
YTFEIFAYASM

>gi568815586r:12840778_13050384|GENSCAN_predicted_CDS_3|756_bp
atgagggctctcccaggctacaccgtgaatgtggaagaggaagaccctatttccttcaag
ggcggcgagcggaaggaactcaggccctgtgcacttcactgtgtctctccacaccccggc
agattaatcaccagggtgttgtctagcaggaaaggctgccaaaaattgcactttgggtct
gagattaggagcgcctggccatgtctgaaccccgctcctatcttagtggccgcaggtggc
tcccaggaaagcatgaatcctgaggttttactgggagaaggggtttcagctgccaggctg
tgtgaacaacccattgtgtctgaagtagctgaagtgttccccttcaggaatgaacccaca
gcagtggctgattcggccgaacccttcaacagacgatttaaatccggaggccccagcgct
ctgggctcctggcgcctcacttaccctagtgccaaggcgttggccgtgaacttggtgctg
cttcccgcgcgcaagagggcagcaggcgagctcctcagtgctgggggagaccttggacag
ctatcccgccctcgcactctgagcagttgttataaaggcggccctcgccggagggaggga
acgagcgaggggatcaagccaatcggaccgaaactcgtctttgtttacgtgtggaacgat
cctggagtggctgcccgcctgtgtcggggctcaagccagcaacaatacacctttgaaatg
tacacctttgaaatttttgcatatgccagcatgtga

>gi568815586r:12840778_13050384|GENSCAN_predicted_peptide_4|401_aa
MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSN
RRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLT
KLVRGRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLL
LTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRW
DDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVEDAFCKPQLVKKSYGVENRAY
SQEEITQGFEETGDTLYAPYSTHFQLQIYRIYGCILCWQATAQVWTAYTKGRVRGEGTQD
SGSMPAYKTTIKGSFQEKVDLELIVEEENKEEEGTKLADIE

>gi568815586r:12840778_13050384|GENSCAN_predicted_CDS_4|1206_bp
atggctacaacagtccctgatggttgccgcaatggcctgaaatccaagtactacagactt
tgtgataaggctgaagcttggggcatcgtcctagaaacggtggccacagccggggttgtg
acctcggtggccttcatgctcactctcccgatcctcgtctgcaaggtgcaggactccaac
aggcgaaaaatgctgcctactcagtttctcttcctcctgggtgtgttgggcatctttggc
ctcaccttcgccttcatcatcggactggacgggagcacagggcccacacgcttcttcctc
tttgggatcctcttttccatctgcttctcctgcctgctggctcatgctgtcagtctgacc
aagctcgtccgggggaggaagcccctttccctgttggtgattctgggtctggccgtgggc
ttcagcctagtccaggatgttatcgctattgaatatattgtcctgaccatgaataggacc
aacgtcaatgtcttttctgagctttccgctcctcgtcgcaatgaagactttgtcctcctg
ctcacctacgtcctcttcttgatggcgctgaccttcctcatgtcctccttcaccttctgt
ggttccttcacgggctggaagagacatggggcccacatctacctcacgatgctcctctcc
attgccatctgggtggcctggatcaccctgctcatgcttcctgactttgaccgcaggtgg
gatgacaccatcctcagctccgccttggctgccaatggctgggtgttcctgttggcttat
gttagtcccgagttttggctgctcacaaagcaacgaaaccccatggattatcctgttgag
gatgctttctgtaaacctcaactcgtgaagaagagctatggtgtggagaacagagcctac
tctcaagaggaaatcactcaaggttttgaagagacaggggacacgctctatgccccctat
tccacacattttcagctgcagatttaccgcatttacggctgcattctgtgctggcaggcc
actgcgcaagtgtggacagcctacaccaagggaagagtcaggggagaaggaacacaagac
tccggaagcatgccagcgtataaaaccaccatcaaaggaagtttccaggaaaaggtagat
ctcgaattaattgtggaagaagaaaacaaagaagaagaaggcacgaagttggccgatata
gaatag

>gi568815586r:12840778_13050384|GENSCAN_predicted_peptide_5|362_aa
MYKDCIESTGDYFLLCDAEGPWGIILESLAILGIVVTILLLLAFLFLMRKIQDCSQWNVL
PTQLLFLLSVLGLFGLAFAFIIELNQQTAPVRYFLFGVLFALCFSCLLAHASNLVKLVRG
CVSFSWTTILCIAIGCSLLQIIIATEYVTLIMTRGMMFVNMTPCQLNVDFVVLLVYVLFL
MALTFFVSKATFCGPCENWKQHGRLIFITVLFSIIIWVVWISMLLRGNPQFQRQPQWDDP
VVCIALVTNAWVFLLLYIVPELCILYRSCRQECPLQGNACPVTAYQHSFQVENQELSRDK
WKVLLNSDFLSHSGAARDSDGAEEDVALTSYGTPIQPQTVDPTQECFIPQAKLSPQQDAG
GV

>gi568815586r:12840778_13050384|GENSCAN_predicted_CDS_5|1089_bp
atgtacaaggactgcatcgagtccactggagactattttcttctctgtgacgccgagggg
ccatggggcatcattctggagtccctggccatacttggcatcgtggtcacaattctgcta
ctcttagcatttctcttcctcatgcgaaagatccaagactgcagccagtggaatgtcctc
cccacccagctcctcttcctcctgagtgtcctggggctcttcggactcgcttttgccttc
atcatcgagctcaatcaacaaactgcccccgtacgctactttctctttggggttctcttt
gctctctgtttctcatgcctcttagctcatgcctccaatctagtgaagctggttcggggt
tgtgtctccttctcctggacgacaattctgtgcattgctattggttgcagtctgttgcaa
atcattattgccactgagtatgtgactctcatcatgaccagaggtatgatgtttgtgaat
atgacaccctgccagctcaatgtggactttgttgtactcctggtctatgtcctcttcctg
atggccctcacattcttcgtctccaaagccaccttctgtggcccgtgtgagaactggaag
cagcatggaaggctcatctttatcactgtgctcttctccatcatcatctgggtggtgtgg
atctccatgctcctgagaggcaacccgcagttccagcgacagccccagtgggacgacccg
gtcgtctgcattgctctggtcaccaacgcatgggttttcctgctgctgtacatcgtccct
gagctctgcattctctacagatcgtgtagacaggagtgccctttacaaggcaatgcctgc
cccgtcacagcctaccaacacagcttccaagtggagaaccaggagctctccagagataaa
tggaaggtcttactcaactcggacttcctatcacacagtggtgcagcccgagacagtgat
ggagctgaggaggatgtagcattaacttcatatggtactcccattcagccgcagactgtt
gatcccacacaagagtgtttcatcccacaggctaaactaagcccccagcaagatgcagga
ggagtataa

>gi568815586r:12840778_13050384|GENSCAN_predicted_peptide_6|183_aa
MASKETAESCRAGAVSVAGNEEVAYEERACEGGKFATVEVTDKPVDEALREAMPKVAKYA
GGTNDKGIGMGMTVPISFAVFPNEDGSLQKKLKVWFRIPNQFQSDPPAPSDKSVKIEERE
GITVYSMQFGGYAKEADYVAQATRLRAALEGTATYRGDIYFCTGYDPPMKPYGRRNEIWL
LKT

>gi568815586r:12840778_13050384|GENSCAN_predicted_CDS_6|552_bp
atggcatcaaaggaaacagcagaaagctgcagagcaggtgctgtgagtgtggctggcaac
gaagaagttgcctatgaagaaagggcctgtgaaggcggcaaatttgccacagtagaagtg
acagataagcctgtggatgaggctctacgggaagcaatgcccaaggtcgcaaagtatgcg
gggggcaccaatgacaagggaattgggatggggatgacagtccctatttcctttgctgtg
ttccccaatgaagatggctctctgcagaagaaattaaaagtctggttccggattccaaac
caatttcaaagcgacccaccagctcccagtgacaaaagcgttaagattgaggaacgggaa
ggcatcactgtctattccatgcagtttggtggttatgccaaggaagcagactacgtagca
caagccacccgtctgcgtgctgccctggagggcacagccacctaccggggggacatctac
ttctgcacgggttatgaccctcccatgaagccctacggacggcgcaatgagatctggctg
ttgaagacatga

>gi568815586r:12840778_13050384|GENSCAN_predicted_peptide_7|224_aa
MDVNSSGHPDLYGRLCSFLLPEKLRQPSNYLIVSMALANLSVAMAVMPFISVTDLIGGKW
IFGHFFCNVFSMNVMCCTAWILTLYVISIDRFTRPPGKARPNTGYLASLEWSQTAVVTLN
GTVKFQEPDPSVYGTACSCIPLWVERIFPWLGYANSLINPFIYAFFNWDLRTTYCSRLQC
QYQNINQTLSAAGMHEALKLAERPERPEFVLQNSDYCRKKSHDS

>gi568815586r:12840778_13050384|GENSCAN_predicted_CDS_7|675_bp
atggatgttaacagcagcggccacccggacctctacgggcgcctctgctctttcctcctg
ccggagaagctccgccagccctccaactacctgatcgtgtccatggcgctggccaacctc
tcggtggccatggcggtcatgcccttcatcagtgtcaccgacctcatcgggggcaagtgg
atctttggacactttttctgtaacgtcttctccatgaatgtcatgtgctgcacggcctgg
atcttgaccttgtacgtgatcagcatcgacagatttacaaggccgccaggaaaagcgcgg
cctaacacaggttacctggcttccctcgagtggagccagacagcagtagtcaccctgaat
ggcacagtgaagttccaggagccagacccttctgtctatggcactgcctgcagctgcatc
ccactgtgggtggagaggatatttccatggctgggctatgcaaactctctcattaaccct
tttatttatgccttcttcaactgggacctgaggaccacctattgcagccggctccagtgc
cagtaccagaatatcaaccagacactctcagctgcaggcatgcatgaagccctgaagctt
gctgagaggccagagagacctgagtttgtcctacaaaactctgactactgtagaaaaaaa
agtcatgattcatga

>gi568815586r:12840778_13050384|GENSCAN_predicted_peptide_8|166_aa
MGFTRSIPDYFAVNRTTHTVMQLHIQLGKHIGIEDAYFRNVPDCCSLHYVSNDEFLNGLV
LGHALGTVRAANKLHVAMAHFGTTIVPSFLCRLGGTDWRLLQLFEFWVSLYVNNFYPFFR
CQLKYQFLTPRTAARNYTSRQNAGARTRTGASAMATVLSRALKLPX

>gi568815586r:12840778_13050384|GENSCAN_predicted_CDS_8|498_bp
atgggcttcacgaggtcaattcctgactactttgctgtgaatcgcacaacccacacagtg
atgcagcttcacatacagcttgggaagcacataggcatcgaagatgcttatttcagaaat
gtccctgactgttgcagcctccactatgtttcaaatgacgaatttcttaatggccttgtc
cttgggcacgcattgggcacagttcgtgcagcaaataagctgcatgtggccatggcccat
tttggcacgaccattgttccttcttttctttgtcgtcttggaggtacagactggagactc
cttcagctctttgagttctgggtcagcctttacgtgaacaacttctacccattcttcagg
tgtcagcttaagtatcagtttctcaccccacgcaccgccgctcggaactacacttcccgg
cagaacgcgggcgcgcgcacgcgcaccggggcctcagccatggcgaccgtgctgtccagg
gcgctcaagctgccggnn