GENSCAN 1.0	Date run:  8-Nov-116	Time: 07:34:12

Sequence gi568815586r:10896949_11097875 : 200927 bp : 36.23% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 Intr -   3339   3266   74  1  2    7  113   100 0.142   2.61
 1.04 Intr -   4406   4289  118  2  1   54   61   101 0.347   3.12
 1.03 Intr -  12304  12162  143  2  2   50   83    64 0.038   1.25
 1.02 Intr -  21039  20958   82  0  1   59   43   102 0.043   1.09
 1.01 Init -  28018  27632  387  1  0   38   41   209 0.246   8.05
 1.00 Prom -  30126  30087   40                              -4.55

 2.00 Prom +  32252  32291   40                              -7.35
 2.01 Init +  32326  32389   64  0  1   63  121    91 0.843  11.36
 2.02 Intr +  33321  33356   36  1  0   89   99    15 0.501   0.02
 2.03 Term +  33714  34114  401  1  2   84   33   464 0.990  34.79
 2.04 PlyA +  35352  35357    6                               1.05

 3.06 PlyA -  36897  36892    6                               1.05
 3.05 Term -  49475  49351  125  0  2   34   49    96 0.004  -2.13
 3.04 Intr -  63209  63103  107  1  2   81   81    88 0.042   6.34
 3.03 Intr -  76773  76707   67  1  1   72   93    46 0.005   0.54
 3.02 Intr -  77844  77800   45  1  0   91   94    39 0.679   2.26
 3.01 Init -  86165  86024  142  2  1   67   64    71 0.567   2.95
 3.00 Prom - 115394 115355   40                              -2.85

 4.00 Prom + 120052 120091   40                              -3.35
 4.01 Init + 120835 120861   27  0  0  107   94     6 0.665   2.33
 4.02 Intr + 129745 129843   99  0  0   53   40    92 0.016   0.29
 4.03 Intr + 151949 152161  213  1  0   97   36   127 0.223   6.39
 4.04 Intr + 166673 166786  114  1  0   80   76    42 0.057   1.92
 4.05 Intr + 175090 175162   73  0  1   51   99     4 0.008  -4.14
 4.06 Intr + 175215 175502  288  1  0   96   61    96 0.099   3.99
 4.07 Term + 192465 192649  185  1  2   77   36   127 0.532   3.12
 4.08 PlyA + 193805 193810    6                               1.05

 5.00 Prom + 195047 195086   40                              -5.35
 5.01 Init + 195280 195502  223  0  1   55   96   124 0.221   8.67

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  55815  56234  420  2  0   65   54   150 0.901   5.38
S.002 Init +  61415  61501   87  1  0   58   78    76 0.877   4.29
S.003 Term + 180935 181033   99  1  0   83   50    98 0.840   2.65


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:10896949_11097875|GENSCAN_predicted_peptide_1|268_aa
MNPGVGFFEKINKIDRPVARLIKKKREKNQIDPPKNDKGDITTDSTEIQTTIRENYKHLY
ANKLENLEEMDTFLDTYTLPRLNQEEFESLSIPLTGSEIEAIINSLPTKKSPGPDGITAE
FYQSYKEELAGKFQKQALISAQLLVRAFQLYLDMAEEFIIGNLSNGFIVLINCIDWVSKR
ELSSVDKLLIILAISRIGLIWEILGYWRDWPKLLIQESGGSEYLEICLLVEQNPPPPTKI
SAQVISRALEKQGTLPSEHWVAQIPSGK

>gi568815586r:10896949_11097875|GENSCAN_predicted_CDS_1|804_bp
atgaatccaggagttggtttttttgaaaagatcaacaaaattgatagaccagtagcaaga
ctaataaagaagaaaagagagaaaaatcaaatagaccccccaaaaaatgataaaggggat
atcaccactgattccacagaaatacaaactaccatcagagaaaactataaacacctctat
gcaaataaactagaaaatctagaagaaatggatacattcctcgacacatacaccctccca
agactaaaccaggaagaatttgaatccctgagtataccactaacaggctctgaaattgag
gcaataattaatagcctaccaaccaaaaaaagtccaggaccagacggaatcacagccgaa
ttctaccagagttacaaggaggagctggctgggaagttccaaaagcaggcactgatatct
gctcagcttctggtgagggctttccagctgtatcttgacatggcagaagaattcataatt
gggaatttgagcaatggatttatagtactgatcaactgcattgactgggtcagtaaaaga
gagctgtcctcagtcgataaactcctcattatcttggcaatctccagaattgggctgatc
tgggaaatattaggatattggagagattggcctaaactcttaatccaggagagtgggggc
tctgaatacctggaaatctgcctgcttgtggagcagaacccacccccaccaaccaagatt
tctgcacaggttatctccagggctttggagaaacaaggtactcttccctctgagcactgg
gttgctcagatccccagtggaaag

>gi568815586r:10896949_11097875|GENSCAN_predicted_peptide_2|166_aa
MLLILLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSA
GDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRP
PRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSPQ

>gi568815586r:10896949_11097875|GENSCAN_predicted_CDS_2|501_bp
atgcttctgattctgctgtcagtggccctgctggccttcagctcagctcaggacttagat
gaagatgtcagccaagaagacgttcccttggtaatatcagatggaggagactctgagcag
ttcatagatgaggagcgtcagggaccacctttgggaggacagcaatctcaaccctctgct
ggtgatgggaaccagaatgatggccctcagcagggaccaccccaacaaggaggccagcag
caacaaggtccaccacctcctcagggaaagccacaaggaccaccccaacagggaggccat
ccccctcctcctcaaggaaggccacaaggaccaccccaacagggaggccatccccgtcct
cctcgaggaaggccacaaggaccaccccaacagggaggccatcagcaaggtcctccccca
cctcctcctggaaagccccagggaccacctccccaagggggccgcccacaaggacctcca
caggggcagtctcctcagtaa

>gi568815586r:10896949_11097875|GENSCAN_predicted_peptide_3|161_aa
MHACSNFEFCYIIWHNGQATWARLYICYRARFCFGFDLRQAALANSFTWSRTIAAELVWL
FGAAAEEYFACWNLLYLLKSGSFHSYLAKYEASSTIGLSAQSNEAVAVTTSLNLTFVKIT
NKLENLEEIDKFLDTYTLPAAGSQRPQTEGPAEAMAEEHKL

>gi568815586r:10896949_11097875|GENSCAN_predicted_CDS_3|486_bp
atgcatgcctgtagcaactttgaattctgttacatcatctggcacaatggccaagcaact
tgggccagactctatatctgctatagagcccgtttttgtttcgggtttgacttgagacaa
gcagcccttgcaaactcctttacctggtcaagaaccattgctgctgaactagtgtggttg
tttggagctgctgcagaagaatattttgcctgctggaacctgctgtatctactcaagagt
ggaagttttcacagttatttagcaaagtatgaagcctcttcaactattggcctatcagcc
caatccaatgaggctgttgctgtcaccacttcattaaatctgacatttgttaagatcacc
aacaaactagaaaacctagaagagatagataaattcctggacacatacaccctccctgct
gctggaagtcagagaccccaaacggagggaccagctgaagccatggcagaagaacataaa
ttgtga

>gi568815586r:10896949_11097875|GENSCAN_predicted_peptide_4|332_aa
MPSRNILFKTGYRMNADYQKLKSTLTNAFQDVLSSLSRAELLVEKNKVGEIGSLEQMKYA
EASNTQMLKCLVIAETLEPKILTSNLCEAKLNTVAYQCNNMTQSKPTLDTTRAKNITDKS
TLLNQECGKYVQPCCVRNSGAKSKNRWEIAKQLTRILFSGSREYPASSFCVTGTTVFVET
SSHHVAQGGLELLASIDIPNCAYQSSGIASKSHHTKPALGVFEGQMLPRFLTHVHPKVDL
ISLLLLPLPEHVIEMDKHGSWQDSHLLPDLQTLLEKVLEAKYTHLMTVMLSLSPHCEVAA
SRAIPDITTHCFTFLPVSISTRPCHFCLEFDF

>gi568815586r:10896949_11097875|GENSCAN_predicted_CDS_4|999_bp
atgccgagcagaaacatcctgtttaagacgggttatagaatgaatgcagactaccagaaa
cttaaatcaacactcacaaatgctttccaggatgtgctgtcttcactaagcagagcagag
cttctggtggagaaaaataaggttggagaaattggcagtcttgagcaaatgaaatatgct
gaggctagtaacacccagatgctgaaatgcttggttattgctgagacattagaaccaaaa
attcttacttctaatctatgtgaagccaaattaaacacagttgcataccaatgtaataat
atgacccagagtaaaccaactctggacaccaccagagcaaaaaacataactgataaatca
actctgctaaaccaagagtgtgggaaatatgtacaaccttgttgtgtcaggaattcagga
gccaaaagcaaaaacagatgggaaattgcaaagcaactgactcgcatattgttttcaggt
tcaagggagtatcctgcctcatccttctgtgtaactgggactacagtttttgtagagaca
agctctcaccatgtagcccagggtggtctggaactcctggcctcaatagatattcccaac
tgtgcctaccaaagttccgggattgcaagcaagagccatcataccaagcctgcactggga
gtttttgaaggtcagatgctacctagatttttgactcatgtacatcccaaggtggatcta
atcagtttgctgttattacctcttcctgaacatgtaattgaaatggacaaacatggcagc
tggcaggactctcaccttcttcctgacctgcagacccttctggaaaaagtgctggaagcc
aagtacacgcatctgatgaccgtcatgctgtctctctcacctcactgtgaagtggctgcc
agcagagccataccagacatcaccacacattgtttcacatttcttcctgtctcaatttcc
acacgtccttgccatttttgtcttgaatttgacttctaa

>gi568815586r:10896949_11097875|GENSCAN_predicted_peptide_5|75_aa
MSEQTKKIFLNAGVVSGIGSCRWVRGLADFKREPLTFTVSVAALKDGVDPKSEQQQGLLR
REKGQSFHRVKGNPX

>gi568815586r:10896949_11097875|GENSCAN_predicted_CDS_5|225_bp
atgtctgaacagacaaaaaaaatttttttaaatgctggtgttgtgtccggaattggttcc
tgcaggtgggttcgtggtctcgctgacttcaaaagggagccactgaccttcacggtgagt
gttgctgctcttaaagatggtgtggacccaaagagtgagcaacagcaaggtttattgaga
agagagaaaggacaaagcttccacagagtgaaaggcaacccagnn