GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:11:54

Sequence gi568815586r:10885964_11086860 : 200897 bp : 36.21% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +    243    442  200  1  2   75   43   142 0.730   4.98
 1.02 PlyA +   1281   1286    6                               1.05

 2.07 PlyA -   2662   2657    6                               1.05
 2.06 Term -   5962   5864   99  1  0  115   28    51 0.432  -1.05
 2.05 Intr -  14324  14251   74  0  2    7  113   100 0.390   2.61
 2.04 Intr -  15391  15274  118  1  1   54   61   101 0.532   3.12
 2.03 Intr -  23289  23147  143  1  2   50   83    64 0.048   1.25
 2.02 Intr -  32024  31943   82  2  1   59   43   102 0.040   1.09
 2.01 Init -  39003  38617  387  0  0   38   41   209 0.236   8.05
 2.00 Prom -  41111  41072   40                              -4.55

 3.00 Prom +  43237  43276   40                              -7.35
 3.01 Init +  43311  43374   64  2  1   63  121    91 0.843  11.36
 3.02 Intr +  44306  44341   36  0  0   89   99    15 0.501   0.02
 3.03 Term +  44699  45099  401  0  2   84   33   464 0.990  34.79
 3.04 PlyA +  46337  46342    6                               1.05

 4.06 PlyA -  47882  47877    6                               1.05
 4.05 Term -  60460  60336  125  2  2   34   49    96 0.004  -2.13
 4.04 Intr -  74194  74088  107  0  2   81   81    88 0.042   6.34
 4.03 Intr -  87758  87692   67  0  1   72   93    46 0.005   0.54
 4.02 Intr -  88829  88785   45  0  0   91   94    39 0.679   2.26
 4.01 Init -  97150  97009  142  1  1   67   64    71 0.567   2.95
 4.00 Prom - 126379 126340   40                              -2.85

 5.00 Prom + 131037 131076   40                              -3.35
 5.01 Init + 131820 131846   27  2  0  107   94     6 0.665   2.33
 5.02 Intr + 140730 140828   99  2  0   53   40    92 0.016   0.29
 5.03 Intr + 162934 163146  213  0  0   97   36   127 0.223   6.39
 5.04 Intr + 177658 177771  114  0  0   80   76    42 0.057   1.92
 5.05 Term + 191920 192018   99  0  0   83   50    98 0.863   2.65
 5.06 PlyA + 192608 192613    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  66800  67219  420  1  0   65   54   150 0.901   5.38
S.002 Init +  72400  72486   87  0  0   58   78    76 0.877   4.29


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:10885964_11086860|GENSCAN_predicted_peptide_1|66_aa
XPGDEQSCLGDFRSTIMSKRKVREKEQRGVPGRYCLMMWGTEEAAGLVQDRFLLGSRVQE
KNRKSS

>gi568815586r:10885964_11086860|GENSCAN_predicted_CDS_1|201_bp
ngacctggagatgagcagtcctgcctcggtgacttcaggtcaaccatcatgtcaaaaagg
aaggtcagagaaaaggaacaaagaggagtgccaggcagatattgcctgatgatgtggggg
actgaggaagctgcaggcctggtgcaagacaggtttctccttggcagcagagtacaggaa
aagaacaggaaatcctcctaa

>gi568815586r:10885964_11086860|GENSCAN_predicted_peptide_2|300_aa
MNPGVGFFEKINKIDRPVARLIKKKREKNQIDPPKNDKGDITTDSTEIQTTIRENYKHLY
ANKLENLEEMDTFLDTYTLPRLNQEEFESLSIPLTGSEIEAIINSLPTKKSPGPDGITAE
FYQSYKEELAGKFQKQALISAQLLVRAFQLYLDMAEEFIIGNLSNGFIVLINCIDWVSKR
ELSSVDKLLIILAISRIGLIWEILGYWRDWPKLLIQESGGSEYLEICLLVEQNPPPPTKI
SAQVISRALEKQGTLPSEHWVAQIPSGKRYLLTFQCKASSSEGKMDRLLTVIKVFKTGVS

>gi568815586r:10885964_11086860|GENSCAN_predicted_CDS_2|903_bp
atgaatccaggagttggtttttttgaaaagatcaacaaaattgatagaccagtagcaaga
ctaataaagaagaaaagagagaaaaatcaaatagaccccccaaaaaatgataaaggggat
atcaccactgattccacagaaatacaaactaccatcagagaaaactataaacacctctat
gcaaataaactagaaaatctagaagaaatggatacattcctcgacacatacaccctccca
agactaaaccaggaagaatttgaatccctgagtataccactaacaggctctgaaattgag
gcaataattaatagcctaccaaccaaaaaaagtccaggaccagacggaatcacagccgaa
ttctaccagagttacaaggaggagctggctgggaagttccaaaagcaggcactgatatct
gctcagcttctggtgagggctttccagctgtatcttgacatggcagaagaattcataatt
gggaatttgagcaatggatttatagtactgatcaactgcattgactgggtcagtaaaaga
gagctgtcctcagtcgataaactcctcattatcttggcaatctccagaattgggctgatc
tgggaaatattaggatattggagagattggcctaaactcttaatccaggagagtgggggc
tctgaatacctggaaatctgcctgcttgtggagcagaacccacccccaccaaccaagatt
tctgcacaggttatctccagggctttggagaaacaaggtactcttccctctgagcactgg
gttgctcagatccccagtggaaagagatatttgcttacattccagtgtaaagcttcttct
tcagaaggcaagatggacaggttactcacagtgatcaaagtttttaagactggagtttcc
taa

>gi568815586r:10885964_11086860|GENSCAN_predicted_peptide_3|166_aa
MLLILLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSA
GDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRP
PRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSPQ

>gi568815586r:10885964_11086860|GENSCAN_predicted_CDS_3|501_bp
atgcttctgattctgctgtcagtggccctgctggccttcagctcagctcaggacttagat
gaagatgtcagccaagaagacgttcccttggtaatatcagatggaggagactctgagcag
ttcatagatgaggagcgtcagggaccacctttgggaggacagcaatctcaaccctctgct
ggtgatgggaaccagaatgatggccctcagcagggaccaccccaacaaggaggccagcag
caacaaggtccaccacctcctcagggaaagccacaaggaccaccccaacagggaggccat
ccccctcctcctcaaggaaggccacaaggaccaccccaacagggaggccatccccgtcct
cctcgaggaaggccacaaggaccaccccaacagggaggccatcagcaaggtcctccccca
cctcctcctggaaagccccagggaccacctccccaagggggccgcccacaaggacctcca
caggggcagtctcctcagtaa

>gi568815586r:10885964_11086860|GENSCAN_predicted_peptide_4|161_aa
MHACSNFEFCYIIWHNGQATWARLYICYRARFCFGFDLRQAALANSFTWSRTIAAELVWL
FGAAAEEYFACWNLLYLLKSGSFHSYLAKYEASSTIGLSAQSNEAVAVTTSLNLTFVKIT
NKLENLEEIDKFLDTYTLPAAGSQRPQTEGPAEAMAEEHKL

>gi568815586r:10885964_11086860|GENSCAN_predicted_CDS_4|486_bp
atgcatgcctgtagcaactttgaattctgttacatcatctggcacaatggccaagcaact
tgggccagactctatatctgctatagagcccgtttttgtttcgggtttgacttgagacaa
gcagcccttgcaaactcctttacctggtcaagaaccattgctgctgaactagtgtggttg
tttggagctgctgcagaagaatattttgcctgctggaacctgctgtatctactcaagagt
ggaagttttcacagttatttagcaaagtatgaagcctcttcaactattggcctatcagcc
caatccaatgaggctgttgctgtcaccacttcattaaatctgacatttgttaagatcacc
aacaaactagaaaacctagaagagatagataaattcctggacacatacaccctccctgct
gctggaagtcagagaccccaaacggagggaccagctgaagccatggcagaagaacataaa
ttgtga

>gi568815586r:10885964_11086860|GENSCAN_predicted_peptide_5|183_aa
MPSRNILFKTGYRMNADYQKLKSTLTNAFQDVLSSLSRAELLVEKNKVGEIGSLEQMKYA
EASNTQMLKCLVIAETLEPKILTSNLCEAKLNTVAYQCNNMTQSKPTLDTTRAKNITDKS
TLLNQECGKYVQPCCVRNSGAKSKNRWEIAKVEKNKVGEIGNLEQIKYAEASSKPDAEMV
DYC

>gi568815586r:10885964_11086860|GENSCAN_predicted_CDS_5|552_bp
atgccgagcagaaacatcctgtttaagacgggttatagaatgaatgcagactaccagaaa
cttaaatcaacactcacaaatgctttccaggatgtgctgtcttcactaagcagagcagag
cttctggtggagaaaaataaggttggagaaattggcagtcttgagcaaatgaaatatgct
gaggctagtaacacccagatgctgaaatgcttggttattgctgagacattagaaccaaaa
attcttacttctaatctatgtgaagccaaattaaacacagttgcataccaatgtaataat
atgacccagagtaaaccaactctggacaccaccagagcaaaaaacataactgataaatca
actctgctaaaccaagagtgtgggaaatatgtacaaccttgttgtgtcaggaattcagga
gccaaaagcaaaaacagatgggaaattgcaaaggtggagaaaaataaggttggagaaatt
ggcaatcttgagcaaataaaatatgctgaggctagcagcaagccagatgctgaaatggtt
gattattgctga