GENSCAN 1.0	Date run:  5-Nov-116	Time: 22:45:10

Sequence gi568815586f:4710042_4911628 : 201587 bp : 43.79% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +    943    982   40                              -2.86
 1.01 Init +  10637  10847  211  1  1   60   80    89 0.325   2.80
 1.02 Intr +  16491  16788  298  1  1  109   75   277 0.834  24.43
 1.03 Intr +  29122  29288  167  1  2   56   89   165 0.713  13.00
 1.04 Intr +  34476  34659  184  1  1   14   79   220 0.999  12.55
 1.05 Intr +  35388  35585  198  0  0   71  100   285 0.999  26.47
 1.06 Intr +  36103  36217  115  1  1   73   59   162 0.880  12.25
 1.07 Intr +  50917  51102  186  0  0  114  109   173 0.962  21.89
 1.08 Intr +  53212  53349  138  0  0   47   36   117 0.879   3.06
 1.09 Intr +  53911  54006   96  0  0  117   70    93 0.932  10.61
 1.10 Intr +  55338  55505  168  2  0  130  117    28 0.998  10.04
 1.11 Term +  62404  62556  153  0  0  124   42   120 0.923   8.92
 1.12 PlyA +  64550  64555    6                               1.05

 2.00 Prom +  71207  71246   40                              -2.56
 2.01 Init +  82330  82384   55  0  1  107   64    54 0.822   6.35
 2.02 Intr +  85410  85451   42  1  0   87   59    54 0.442   0.61
 2.03 Intr +  93553  93677  125  2  2   77   31    77 0.286   1.20
 2.04 Intr +  93884  94095  212  1  2  119   81    28 0.537   2.91
 2.05 Term +  96551  96668  118  2  1   73   40    89 0.593   0.61
 2.06 PlyA +  96800  96805    6                               1.05

 3.00 Prom +  97924  97963   40                              -8.06
 3.01 Sngl + 100001 101590 1590  1  0   66   46  2490 0.990 237.97
 3.02 PlyA + 105536 105541    6                               1.05

 4.03 PlyA - 106606 106601    6                               1.05
 4.02 Term - 108336 108257   80  1  2   63   48    69 0.042  -1.67
 4.01 Init - 119313 119256   58  0  1   61  127    30 0.674   5.67
 4.00 Prom - 128808 128769   40                              -3.16

 5.06 PlyA - 129383 129378    6                               1.05
 5.05 Term - 135490 135358  133  0  1   90   38    95 0.222   2.26
 5.04 Intr - 137921 137797  125  2  2   88   66    36 0.144   0.78
 5.03 Intr - 146094 145834  261  0  0   64   60   106 0.586   3.08
 5.02 Intr - 146363 146258  106  1  1   50   96    29 0.677   0.12
 5.01 Init - 146848 146751   98  1  2   65  121    71 0.528   7.88
 5.00 Prom - 153734 153695   40                              -3.86

 6.06 PlyA - 155183 155178    6                               1.05
 6.05 Term - 166177 166166   12  1  0  121   39    12 0.334  -2.20
 6.04 Intr - 169588 169488  101  2  2   58   95    74 0.308   4.93
 6.03 Intr - 170620 170484  137  0  2   74  103    -2 0.609   0.11
 6.02 Intr - 171783 171646  138  2  0   64   94    98 0.920   7.58
 6.01 Init - 181634 181573   62  2  2   66  103    -5 0.136  -0.48
 6.00 Prom - 183423 183384   40                              -5.76

 7.00 Prom + 183498 183537   40                              -5.16
 7.01 Init + 201338 201573  236  1  2  104  -14   547 0.988  43.71

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:4710042_4911628|GENSCAN_predicted_peptide_1|637_aa
MMFWRKLPKALFIGLTLAIAVNLLLVFSSKGTLQNLFTGGLHRELPLHLNKRYGAVIKRL
SHLEVELQDLKESMKLALRQQENVNSTLKRAKDEVRPLLKAMETKVNETKKHKTQMKLFP
HSQLFRQWGEDLSEAQQKAAQDLFRKFGYNAYLSNQLPLNRTIPDTRDYRCLRKTYPSQL
PSLSVILIFVNEALSIIQRAITSIINRTPSRLLKEIILVDDFSSNGELKVHLDEKIKLYN
QKYPGLLKIIRHPERKGLAQARNTGWEAATADVVAILDAHIEVNVGWAEPILARIQEDRT
VIVSPVFDNIRFDTFKLDKYELAVDGFNWELWCRYDALPQAWIDLHDVTAPVKSPSIMGI
LAANRHFLGEIGSLDGGMLIYGGENVELSLRVWQCGGKVEILPCSRIAHLERHHKPYALD
LTAALKRNALRVAEIWMDEHKHMVYLAWNIPLQNSGIDFGDVSSRMALREKLKCKTFDWY
LKNVYPLLKPLHTIVGYGRMKNLLDENVCLDQGPVPGNTPIMYYCHEFSSQNVYYHLTGE
LYVGQLIAEASASDRCLTDPGKAEKPTLEPCSKAAKNRLHIYWDFKPGGAVINRDTKRCL
EMKKDLLGSHVLVLQTCSTQVWEIQHTVRDWGQTNSQ

>gi568815586f:4710042_4911628|GENSCAN_predicted_CDS_1|1914_bp
atgatgttttggaggaaactccccaaagccctcttcattgggctgactctggccattgct
gtcaatctccttctggtattttctagcaaggggactttacaaaacctgtttacgggtggt
ctccacagggagcttcctttacatctgaataaacgctacggggcagtgataaagagactc
tcccacttggaggtggaattgcaggatctgaaagaaagtatgaaattagctctgaggcaa
caagaaaatgtgaacagcacactgaagagggcgaaagatgaagtacgccctcttctaaag
gcaatggaaaccaaggtgaatgagacaaagaagcacaaaacccaaatgaaactcttccca
cactcacagcttttcaggcaatggggcgaggatctttctgaggcccagcagaaggcggcc
caggacctcttccggaagtttggttacaacgcgtacctcagcaaccagctgcctctcaat
cgcaccatccccgacacgcgagactacagatgtcttcggaagacatatccttcccaactc
ccatccctcagtgtcattctcatattcgtgaatgaagctctgtccattatacaacgggcc
atcaccagtatcatcaaccggacgccctctcgattgttgaaggaaatcatcttggtggat
gatttcagctcaaatggagaactaaaggtacacttggatgagaagattaagctttacaac
cagaagtatccaggactactgaaaataatacggcatcctgaaaggaaaggtcttgctcaa
gcccgcaacactggctgggaagctgccacagcagacgtggtcgccatcttggatgctcac
attgaagtcaatgttgggtgggcagagccaatcttggctcggattcaggaggaccgcact
gtgattgtgtctcctgtgtttgacaacattcgttttgacaccttcaaactggataagtat
gaactggcagttgatgggtttaactgggaactctggtgccgctacgatgcactgccacaa
gcctggattgatctgcatgatgtcactgccccagtgaagagtccttcaatcatgggcatc
ctggctgctaacaggcacttcctgggagagatcgggtctctggatggtggaatgctcatc
tatggaggagagaacgtggagcttagcctgagggtgtggcagtgtggagggaaggtcgag
attttgccctgttcccggattgcccacctagagagacaccacaagccctacgccttggat
ctcaccgctgccttgaagcgcaatgctctgcgagtggccgaaatctggatggatgagcac
aaacacatggtctacttggcctggaacatacctctccagaactctggaatagattttgga
gacgtttcttccagaatggcactccgggaaaaactgaaatgtaaaacttttgactggtac
ctgaaaaatgtttatccactcttgaagccactccacaccatcgtgggctatggaagaatg
aaaaacctattggatgaaaatgtctgcttggatcagggacccgttccaggcaacaccccc
atcatgtattactgccatgaattcagctcacagaatgtctactatcacctaactggggag
ctctatgtgggacaactgattgcagaggccagtgctagtgatcgctgcctgacagaccct
ggcaaggcggagaagcccaccttagaaccatgctccaaggcagctaagaatagactgcat
atatattgggattttaaaccgggaggagctgtcataaacagagataccaagcggtgtctg
gagatgaagaaggatcttttgggtagccacgtgcttgtgctccagacctgtagcacgcaa
gtgtgggaaatccagcacactgtcagagactggggtcagaccaacagccagtga

>gi568815586f:4710042_4911628|GENSCAN_predicted_peptide_2|183_aa
MAEAEEGREVSVNEDSEGAALAADWMVPAQIEGEAQEEGNGHSASRDEMNRRELQVKALC
YQVLAGNINEFVEPDSMLSSLSSRKSRRRLREGVNMTQTLGKGVNEGTREGSWARQNAVF
GQRSFHLEHAEEPKLEGRALPRVRWGTSLGTVKPFLGHDLMLDVKVITEHQLCLKGGRQP
SQA

>gi568815586f:4710042_4911628|GENSCAN_predicted_CDS_2|552_bp
atggctgaagctgaggaggggagagaagtgtcagtcaatgaggactcagagggagctgcg
ctggcagctgattggatggtgcccgcccagattgagggggaagcccaggaggagggaaat
ggccacagtgcatccagagacgaaatgaatagaagggaacttcaggtcaaagcgttgtgc
tatcaagtgttggcagggaacatcaatgagtttgtggaaccagattcaatgctgtcttct
ctctccagcagaaaaagtaggagaaggttaagagaaggagtaaacatgacccagaccctg
gggaaaggggtgaatgaggggaccagagaagggagttgggccaggcagaacgctgtgttt
ggacagaggagcttccacttggaacacgctgaagaaccaaagctcgagggcagagccttg
cccagagtgagatggggaacctccctgggcacagtgaaacccttcttggggcacgacctc
atgcttgatgtgaaggtcatcacagaacatcagctctgcctgaagggtggccggcagccc
agtcaggcttaa

>gi568815586f:4710042_4911628|GENSCAN_predicted_peptide_3|529_aa
MRSEKSLTLAAPGEVRGPEGEQQDAGDFPEAGGGGGCCSSERLVINISGLRFETQLRTLS
LFPDTLLGDPGRRVRFFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFLEE
IRFYQLGDEALAAFREDEGCLPEGGEDEKPLPSQPFQRQVWLLFEYPESSGPARGIAIVS
VLVILISIVIFCLETLPQFRVDGRGGNNGGVSRVSPVSRGSQEEEEDEDDSYTFHHGITP
GEMGTGGSSSLSTLGGSFFTDPFFLVETLCIVWFTFELLVRFSACPSKPAFFRNIMNIID
LVAIFPYFITLGTELVQQQEQQPASGGGGQNGQQAMSLAILRVIRLVRVFRIFKLSRHSK
GLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAEADDDDSLFPSIPDAFWWAVVTM
TTVGYGDMYPMTVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEQEEQGQYTHV
TCGQPAPDLRATDNGLGKPDFPEANRERRPSYLPTPHRAYAEKRMLTEV

>gi568815586f:4710042_4911628|GENSCAN_predicted_CDS_3|1590_bp
atgagatcggagaaatcccttacgctggcggcgccgggggaggtccgtgggccggaggga
gagcaacaggatgcgggagacttcccggaggccggcgggggcgggggctgctgtagtagc
gagcggctggtgatcaatatctccgggctgcgctttgagacacaattgcgcaccctgtcg
ctgtttccggacacgctgctcggagaccctggccggcgagtccgcttcttcgaccccctg
aggaacgagtacttcttcgaccgcaaccggcccagcttcgacgccatcctctactactac
cagtctgggggccgcctgcggaggccggtcaacgtgcccctggacattttcctggaggag
atccgcttctaccagctgggggacgaggccctggcggccttccgggaggacgagggctgc
ctgcccgaaggtggcgaggacgagaagccgctgccctcccagcccttccagcgccaggtg
tggctgctctttgagtacccagagagctctgggccggccaggggcatcgccatcgtctcc
gtgttggtcattctcatctccatagtcatcttttgcctggagaccttaccccagttccgt
gtagatggtcgaggtggaaacaatggtggtgtgagtcgagtctccccagtttccaggggg
agtcaggaggaagaggaggatgaagacgattcctacacatttcatcatggcatcacccct
ggggaaatggggaccgggggctcctcctcactcagtactcttgggggctccttctttaca
gaccccttctttctggtggagacgctgtgcattgtctggttcacttttgagctcctggtg
cgcttctccgcctgccctagcaagccggccttcttccggaacatcatgaacatcattgac
ttggtggctatcttcccctacttcatcaccctgggcactgagctggtgcagcagcaggag
cagcaaccagccagtggaggaggcggccagaatgggcagcaggccatgtccctggccatc
ctccgagtcatccgcctggtccgggtgttccgcatcttcaagctctcccgccactccaag
gggctgcagatcctgggcaagaccttgcaggcctccatgagggagctggggctgctcatc
ttcttcctcttcatcggggtcatcctcttctccagtgccgtctacttcgcagaggctgac
gatgacgattcgctttttcccagcatcccggatgccttctggtgggcagtggttacaatg
accacggtaggttacggggacatgtaccccatgactgtggggggaaagatcgtgggctcg
ctgtgtgccatcgctggggtcctcaccattgccctgcctgtgcccgtcatcgtctccaac
ttcaactacttctaccaccgggagacggagcaggaggagcaaggccagtatacccacgtc
acttgtgggcagcctgcgccggacctgagggcaactgacaacggacttggcaagcctgac
ttccccgaggctaaccgggaacggagacccagctaccttcctacaccacatcgggcctat
gcagagaaaagaatgctcacggaggtctga

>gi568815586f:4710042_4911628|GENSCAN_predicted_peptide_4|45_aa
MLLDSTGKSAQGGEAPSSDAKEGFEPRRSGSSNYALKPFVKSHDV

>gi568815586f:4710042_4911628|GENSCAN_predicted_CDS_4|138_bp
atgcttctggacagcacaggcaaatcagctcaaggaggggaagcaccctcctcagacgca
aaggagggatttgagccgcgacgatcaggctccagcaactatgctcttaaaccctttgtt
aaatcgcacgatgtctga

>gi568815586f:4710042_4911628|GENSCAN_predicted_peptide_5|240_aa
MKQYLEIKSSEDSVTSRRGGLTEPPELAPAGTRGGNQGPEWKTDTRGKRVAYKVTFHVSP
PHSGSSDQSTLSQSSQGVQPLRGVSRNTSCCFLYDLFLEVAGTHKQGLSKMSTCFHRPGD
REPLRPQLPYIYLESPSSHLYFCTQYLRRSGAEGQGNIKQAVGEYFPGKTKGFQEKKACR
HWRPPVRQPDPSFITLQNRVPNVQHLHNNARNVTAEHPEREKLNNLQRDRSSRTKQSEKR

>gi568815586f:4710042_4911628|GENSCAN_predicted_CDS_5|723_bp
atgaagcagtacttggaaattaaaagcagtgaggactctgtcaccagcaggcgaggtggc
ctcacagagccccctgagctggcaccggctggcacaagagggggaaaccaaggccctgag
tggaagactgacaccagaggaaaaagggttgcatacaaggtcaccttccatgtctcccct
cctcactccgggtccagtgatcagagcacactgagccaaagttcccagggcgtccagcct
ctgcgtggagtttccaggaacacttcctgctgcttcctctacgacctcttcctggaagtt
gcaggcacccataagcaaggactctctaagatgtccacttgctttcacaggccaggagat
cgggagcctttgaggcctcagctcccctacatctacttggaatccccgagcagccacctt
tacttctgcacccaatacctccggcggagtggggcagaagggcagggtaatatcaaacag
gcagttggagaatattttcctggaaaaaccaaaggattccaagaaaaaaaggcctgtaga
cactggaggcccccagtgagacagcctgatcccagcttcatcactctgcagaaccgtgtg
cctaatgtccaacacctccacaacaatgcacgtaacgtgactgcggagcatccagaaaga
gaaaagcttaacaacctgcagagggacagaagttcacgtacaaagcaatcagaaaagcgt
tga

>gi568815586f:4710042_4911628|GENSCAN_predicted_peptide_6|149_aa
MLQNPTLFEHQHDIINGKFPMHLIPGCGSNKTNRDCLTGPLWSGYFPFRCRQPSEHAASK
SSEITAGAEWSTHLPLSQRALVLLCNKASLTTKHVLKWEFVCASSLFACHYTCAPAVAER
AQCRIQAMASEGASIKPWQPPLGVEPPLY

>gi568815586f:4710042_4911628|GENSCAN_predicted_CDS_6|450_bp
atgctccaaaatccaacactttttgaacaccaacatgatatcataaatggaaaattcccc
atgcacctgattcctggatgtggcagcaataaaaccaaccgagattgtttgactggcccc
ctctggagcgggtatttcccattccgatgccgtcagccatctgagcatgctgcttccaag
agctccgaaataacagccggtgctgaatggagcacacaccttcctctcagccagagagca
cttgtcctcctgtgcaataaagcttcactgacgaccaagcatgttttaaaatgggagttt
gtctgtgcaagctctctctttgcctgccactatacatgtgctccagctgtggctgaaagg
gcccaatgtagaattcaggccatggcttcagagggtgcaagcatcaagccttggcagcct
ccacttggtgttgagcctccactctactag

>gi568815586f:4710042_4911628|GENSCAN_predicted_peptide_7|79_aa
MTVMSGENVDEASAAPGHPQDGSYPRQADHDDHECCERVVINISGLRFETQLKTLAQFPN
TLLGNPKKRMRYFDPLRND

>gi568815586f:4710042_4911628|GENSCAN_predicted_CDS_7|237_bp
atgacggtgatgtctggggagaacgtggacgaggcttcggccgccccgggccacccccag
gatggcagctacccccggcaggccgaccacgacgaccacgagtgctgcgagcgcgtggtg
atcaacatctccgggctgcgcttcgagacgcagctcaagaccctggcgcagttccccaac
acgctgctgggcaaccctaagaaacgcatgcgctacttcgaccccctgaggaacgan