GENSCAN 1.0	Date run:  6-Nov-116	Time: 15:03:45

Sequence gi568815587r:86851145_87055085 : 203941 bp : 42.03% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6008   6081   74  1  2   81   86   109 0.894  10.59
 1.02 Intr +   6486   6765  280  0  1  -32   88   263 0.450  10.86
 1.03 Intr +   9629   9783  155  1  2  101   84   100 0.799   8.85
 1.04 Term +  14532  14661  130  0  1    8   47   140 0.229  -1.43
 1.05 PlyA +  16343  16348    6                               1.05

 2.03 PlyA -  17388  17383    6                               1.05
 2.02 Term -  26709  26607  103  2  1  136   34    63 0.471   2.47
 2.01 Init -  29122  28752  371  1  2   68   22   152 0.227   3.11
 2.00 Prom -  31543  31504   40                              -5.75

 3.00 Prom +  32382  32421   40                              -2.05
 3.01 Init +  34802  34857   56  1  2   79   92   112 0.999  11.51
 3.02 Intr +  35433  35518   86  0  2   67   80    81 0.063   3.74
 3.03 Intr +  54172  54294  123  2  0  101   34   108 0.229   6.34
 3.04 Intr +  68733  68894  162  1  0   54   65    83 0.019   1.63
 3.05 Term +  81202  81311  110  2  2   43   54   114 0.189   1.19
 3.06 PlyA +  83836  83841    6                               1.05

 4.05 PlyA -  84105  84100    6                               1.05
 4.04 Term -  87073  86939  135  1  0   98   48   159 0.848   9.94
 4.03 Intr -  97850  97719  132  2  0   88   54    57 0.339   2.22
 4.02 Intr - 101326 100064 1263  1  0   67   98   661 0.113  51.36
 4.01 Init - 103941 103657  285  0  0   93   80   473 0.471  42.12
 4.00 Prom - 110777 110738   40                              -4.75

 5.02 PlyA - 110862 110857    6                               1.05
 5.01 Sngl - 113374 112721  654  1  0   39   48   246 0.809  11.62
 5.00 Prom - 113535 113496   40                              -9.85

 6.02 PlyA - 113720 113715    6                               1.05
 6.01 Sngl - 114550 113849  702  1  0   49   37   310 0.801  17.96
 6.00 Prom - 114643 114604   40                              -5.95

 7.02 PlyA - 114812 114807    6                               1.05
 7.01 Sngl - 116046 115744  303  0  0   88   54   313 0.985  23.48
 7.00 Prom - 126070 126031   40                              -5.45

 8.00 Prom + 126655 126694   40                              -7.55
 8.01 Init + 131608 131624   17  0  2   63  111    -6 0.495  -0.91
 8.02 Intr + 131940 132158  219  0  0   69   75   202 0.546  13.50
 8.03 Intr + 161895 162060  166  0  1  119   42    56 0.294   3.14
 8.04 Intr + 163549 163593   45  0  0  122   77    39 0.300   3.89
 8.05 Term + 186857 187078  222  1  0   99   34   244 0.126  16.03
 8.06 PlyA + 188296 188301    6                               1.05

 9.00 Prom + 196460 196499   40                              -7.45
 9.01 Sngl + 197064 198080 1017  2  0   88   43   698 0.956  62.07
 9.02 PlyA + 198308 198313    6                               1.05

10.00 Prom + 198477 198516   40                              -9.55
10.01 Sngl + 199426 200400  975  0  0   70   42   301 0.949  20.21
10.02 PlyA + 200432 200437    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  35089  35221  133  1  1   88   43   111 0.865   3.18


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:86851145_87055085|GENSCAN_predicted_peptide_1|212_aa
MGMTTAYITDATTPFLGDDDTAEVRWADGHKSVIGHQSQEHVFYTCKKDKERHLCQAARI
RDDSAMRLHVHNHLGNCGRGETNVSPGQVGEEEVHGGVEVGVRAASQDDEQVPQHRDQGG
EDNNTALSIAGNVRHPVIFFLISRGRENDITPNIVEVYSPPVILFLISVGWPIPGFGPTE
DSVDSAASSGPYSSPPNSDKVFSCSLETSRPD

>gi568815587r:86851145_87055085|GENSCAN_predicted_CDS_1|639_bp
atggggatgaccacagcgtacatcactgatgccaccactccattcctgggagatgatgac
acagctgaagtcagatgggcagatggccacaaatcggtcataggccatcagagtcaggag
catgtcttctatacatgcaaaaaggacaaagaaagacatctgtgtcaggcagcccgcata
agagatgactctgctatgcgactgcatgtccacaatcatcttgggaactgtggccgaggt
gaaaccaatgtcagcccaggacaggttggagaggaagaagtacatgggggtgtggaagtg
ggggtcagagctgccagccaggatgatgaacaggttcctcagcatcgtgaccagggcggg
gaagacaataatactgccctcagtatcgcgggaaatgtacgtcaccctgtgatatttttc
ctaatatccagagggagagagaatgatattactcccaatatcgtagaagtgtacagcccc
cctgtgatattgttcttaatatccgtgggatggccaattcctggctttggtcccactgag
gactccgtggacagtgctgccagctcaggtccctactcctccccacctaattctgacaag
gtgttctcatgctccttggaaacatcaagaccagactaa

>gi568815587r:86851145_87055085|GENSCAN_predicted_peptide_2|157_aa
MTLNEHAAFKHLFNKAHLTPPLIHLTLSGHSTCFREHRVGGKVTDQQDHKAEEFFLVQNK
MKSLPCLPLSTQTRQPSDFSILSPPFSPFYSTKPPLSSWPVLNELLGTPPRRGGGRAEGL
LTSQNEKVDPKIHMELQGTLNSQKSFENKQSWRVHTS

>gi568815587r:86851145_87055085|GENSCAN_predicted_CDS_2|474_bp
atgactcttaatgagcatgctgccttcaagcatctgtttaacaaagcacatcttacaccg
cccttaatccatttaaccctgagtggacacagcacatgcttcagagagcacagggttggg
ggtaaggtcaccgatcaacaggatcacaaggcagaagaatttttcttagtacagaacaaa
atgaaaagtctcccgtgtctacctctttctacacagacacggcaaccatccgatttctca
atcctttccccgcctttctcccctttctattccacaaaaccgccattgtcatcatggccc
gttctcaatgagctgttgggtacacctcccagacggggtggtggccgggcagaggggctc
ctcacttcccaaaatgaaaaagttgatcctaaaattcatatggaattgcaagggaccctg
aatagccaaaagagttttgaaaacaaacaaagttggagagttcacacttcctga

>gi568815587r:86851145_87055085|GENSCAN_predicted_peptide_3|178_aa
MASVGYLVVNDDDDDGDSRICLSEDPTCNNPVMKIKCNSPHKVDLQPGLWVLSMIKHVKA
QDSDKAPFKRMVLFLRHIIDTLALASSGAASLSMALTWSPPRFRKVHPPFVHQLLPSLNL
ANVAKIKLQVDCRRQREGLCFCGFEGYSKKGSRLSVPEAGAITISDTATQPPEEFAGG

>gi568815587r:86851145_87055085|GENSCAN_predicted_CDS_3|537_bp
atggcaagtgtgggctatctggtagttaatgatgatgatgatgatggtgatagcagaatt
tgtctctcagaggacccaacctgcaacaatcctgttatgaagattaaatgtaatagtccc
cataaagtggacttgcagccagggctatgggttttaagcatgataaagcatgtgaaagcc
caggacagtgataaggcaccattcaaacgtatggtgctcttcctacggcacatcattgat
actcttgctctagcctcttcaggagcagcttcacttagcatggctctaacctggtctccc
cctagattcagaaaagtgcatccaccctttgttcaccagctgcttcccagcctcaacttg
gccaatgttgctaaaatcaaactacaagtagactgcagacgccagcgtgaaggcctgtgc
ttctgtgggtttgaaggatacagcaaaaaaggaagcagactgtcagttcctgaagcaggg
gccatcaccatcagtgacacggccacccagcctccagaagagtttgctgggggctga

>gi568815587r:86851145_87055085|GENSCAN_predicted_peptide_4|604_aa
MAWRGAGPSVPGAPGGVGLSLGLLLQLLLLLGPARGFGDEEERRCDPIRISMCQNLGYNV
TKMPNLVGHELQTDAELQLTTFTPLIQYGCSSQLQFFLCSVYVPMCTEKINIPIGPCGGM
CLSVKRRCEPVLKEFGFAWPESLNCSKFPPQNDHNHMCMEGPGDEEVPLPHKTPIQPGEE
CHSVGTNSDQYIWVKRSLNCVLKCGYDAGLYSRSAKEFTDIWMAVWASLCFISTAFTVLT
FLIDSSRFSYPERPIIFLSMCYNIYSIAYIVRLTVGRERISCDFEEAAEPVLIQEGLKNT
GCAIIFLLMYFFGMASSIWWVILTLTWFLAAGLKWGHEAIEMHSSYFHIAAWAIPAVKTI
VILIMRLVDADELTGLCYVGNQNLDALTGFVVAPLFTYLVIGTLFIAAGLVALFKIRSNL
QKDGTKTDKLERLMVKIGVFSVLYTVPATCVIACYFYEISNWALFRYSADDSNMAVEMLK
IFMSLLVGITSGMWIWSAKTLHTWQKCSNRLVNSGKTVPITVHGPGARTQGQSLPLLTLC
SGVLGVVQGLWPRQGKEDQAMCLSFSRARAVLAPNAGSGARQMFTDILAAAICGTGLLHL
AAVF

>gi568815587r:86851145_87055085|GENSCAN_predicted_CDS_4|1815_bp
atggcctggcggggcgcagggccgagcgtcccgggggcgcccgggggcgtcggtctcagt
ctggggttgctcctgcagttgctgctgctcctggggccggcgcggggcttcggggacgag
gaagagcggcgctgcgaccccatccgcatctccatgtgccagaacctcggctacaacgtg
accaagatgcccaacctggttgggcacgagctgcagacggacgccgagctgcagctgaca
actttcacaccgctcatccagtacggctgctccagccagctgcagttcttcctttgttct
gtttatgtgccaatgtgcacagagaagatcaacatccccattggcccatgcggcggcatg
tgtctttcagtcaagagacgctgtgaacccgtcctgaaggaatttggatttgcctggcca
gagagtctgaactgcagcaaattcccaccacagaacgaccacaaccacatgtgcatggaa
gggccaggtgatgaagaggtgcccttacctcacaaaacccccatccagcctggggaagag
tgtcactctgtgggaaccaattctgatcagtacatctgggtgaaaaggagcctgaactgt
gtgctcaagtgtggctatgatgctggcttatacagccgctcagccaaggagttcactgat
atctggatggctgtgtgggccagcctgtgtttcatctccactgccttcacagtactgacc
ttcctgatcgattcttctaggttttcctaccctgagcgccccatcatatttctcagtatg
tgctataatatttatagcattgcttatattgtcaggctgactgtaggccgggaaaggata
tcctgtgattttgaagaggcagcagaacctgttctcatccaagaaggacttaagaacaca
ggatgtgcaataattttcttgctgatgtacttttttggaatggccagctccatttggtgg
gttattctgacactcacttggtttttggcagcaggactcaaatggggtcatgaagccatt
gaaatgcacagctcttatttccacattgcagcctgggccatccccgcagtgaaaaccatt
gtcatcttgattatgagactggtggatgcagatgaactgactggcttgtgctatgttgga
aaccaaaatctcgatgccctcaccgggttcgtggtggctcccctctttacttatttggtc
attggaactttgttcattgctgcaggtttggtggccttgttcaaaattcggtcaaatctt
caaaaggatgggacaaagacagacaagttagaaagactgatggtcaagattggggtgttc
tcagtactgtacacagttcctgcaacgtgtgtgattgcctgttatttttatgaaatctcc
aactgggcactttttcggtattctgcagatgattccaacatggctgttgaaatgttgaaa
atttttatgtctttgttggtgggcatcacttcaggcatgtggatttggtctgccaaaact
cttcacacgtggcagaagtgttccaacagattggtgaattctggaaagacagttcccata
actgtccacggccctggagcacgcacccaggggcagagcctgcccttactcacgctctgc
tctggtgtcttgggagttgtgcagggactctggcccaggcaggggaaggaagaccaggcg
atgtgtttgagcttctcaagggcaagagctgttcttgcgcccaatgctggttcgggtgct
cgacaaatgttcactgacatcctggcagcagccatttgtggcactggattgttgcatttg
gctgcagtgttttga

>gi568815587r:86851145_87055085|GENSCAN_predicted_peptide_5|217_aa
MNIIVKTLNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNICKSINVIHHINRTSDKNHM
IISIDAEKAFDKIQQPFMLKTLNKLGVDGMYLKIIRAIYDKPTANIILNGQKLEAFPLKT
GTRQGCPLSSLLFNMVLELLARAVRQEKEIQDIQLGKQEVKLSLFADDMIVYLENPTVAA
QNLLKLTSNFSKVSGYKINMQKSQAFLYTKNTQTATS

>gi568815587r:86851145_87055085|GENSCAN_predicted_CDS_5|654_bp
atgaatatcattgtgaaaaccctcaataaaatactggcaaaccgaatccagcagcacatc
aaaaagcttatccaccacgatcaagtgggcttcatccctgggatgcaaggctggttcaac
atatgcaaatcaataaatgtaatccatcacataaacagaaccagtgacaaaaaccacatg
attatctcaatagatgcagaaaaggccttcgacaaaattcaacagcctttcatgctaaaa
accctcaataaactaggtgttgatggaatgtatctcaaaataataagagctatttatgac
aaaccgacagccaatatcatactgaatgggcaaaaactagaagcattccctttgaaaacc
ggcacaagacaaggatgccctctctcatcactcctattcaacatggtattggaacttctg
gccagggcagtcaggcaagagaaagaaatacaggatattcaattaggaaaacaggaagtc
aaattgtctctgtttgcagatgacatgattgtatatttagaaaaccccactgtcgcagcc
caaaatctccttaagctgacaagcaacttcagcaaagtctcaggatacaaaatcaatatg
caaaaatcacaagcattcctatacaccaagaacacacaaacagccacatcatga

>gi568815587r:86851145_87055085|GENSCAN_predicted_peptide_6|233_aa
MGDFNTPLSTSDRSMRQKINKDIQNLNSALDQVDLIDIYRTLHPKSTEYTFFSAPHDTYS
KIDYIIGSKTLLSECKRTEITTNCLSDHSAIKLELRIKKLTKNHTTTWKLNNLLLNNYWV
NNEMKAEIKMFFETNDNKDTMYQNLWDTFKAVCRGKFIALNAHKRKKERSKIDTLTSQFK
EQEKQEQTNSKASRRQEITRLRAELQEIETQKTLQKINESRSWFFEKINKIDY

>gi568815587r:86851145_87055085|GENSCAN_predicted_CDS_6|702_bp
atgggagactttaacaccccactgtcaacatcagacagatcaatgagacagaaaattaac
aaggatattcagaacttgaactcagctctggaccaagtggacctaatagacatctacaga
actcttcaccccaaatcaacagaatatacattcttctcagcaccacatgacacttattcc
aaaattgactatataattggaagtaaaacactcctcagcgaatgtaaaagaacagaaatc
acaacaaactgtctctcagaccacagtgcaatcaaattagaactcaggattaagaaactc
actaaaaaccacacaactacatggaaactgaacaacctgctcctgaataactactgggta
aataacgaaatgaaggcagaaataaagatgttctttgaaaccaatgataacaaagacaca
atgtaccagaatctctgggacacatttaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagaaggaaagatctaaaatcgacaccctaacatcacaatttaaa
gaacaagagaagcaagagcaaacaaattcaaaagctagcagaaggcaagaaataactagg
ctcagagcagaactgcaggagatagagacacaaaaaacccttcaaaaaatcaatgaatcc
aggagctggttttttgaaaagatcaacaaaatagactactag

>gi568815587r:86851145_87055085|GENSCAN_predicted_peptide_7|100_aa
MGRKKSRKAKNSKNQNASSTPKEHNSLPAREQNWTENEFDKLTEAGFRRSAITNFSELKE
HVLTHRKEAKNLEKRLDKWLIRISSEEKSLNDLMELKTTV

>gi568815587r:86851145_87055085|GENSCAN_predicted_CDS_7|303_bp
atggggagaaaaaagagcagaaaggctaaaaattccaaaaaccaaaacgcctcttctact
ccaaaggaacataactccttgccagcaagggaacaaaactggacagagaatgagtttgac
aagttgacagaagcaggcttcagaaggtcggcaataacaaacttctctgagctaaaggag
catgttctaacccatcgcaaggaagctaaaaaccttgaaaaaaggttagacaaatggcta
attcgaatatccagtgaagagaagagcttaaatgacctgatggagctgaaaaccacagta
tga

>gi568815587r:86851145_87055085|GENSCAN_predicted_peptide_8|222_aa
MCQAICGEWRSWSSCPAAQQRVDEQLRHTDEQPGLIQAAACNSLAGPIQDFLQKYHITAA
GWLDFANCLTPSCTGNFSRAASLQNSRGTIHIVPLRICPSQSITIWMMSPEVVQLSTEQI
FQDQVIVLFPSSKALGFGVLKPQEERFYKGSGSPPPVFSALFLVMAALSKSIPHNCYEIG
HTWHPSCRVSFLQITGGALEESLKIYAPLYLVRPVTRPAGRV

>gi568815587r:86851145_87055085|GENSCAN_predicted_CDS_8|669_bp
atgtgccaggcaatttgtggggagtggcggtcctggagttcttgcccagctgcccagcag
agagtggacgagcagctgaggcacactgacgaacagcctgggttaatccaggctgcagct
tgcaactcccttgcaggacccatccaggatttccttcagaagtatcacatcacagcagct
ggctggcttgactttgccaactgcttgacccctagctgcacaggaaacttcagcagggca
gcttccttgcagaactccaggggtaccatccacattgtgcctctcagaatatgtccatca
caatctattacaatatggatgatgtcccctgaagttgtgcagcttagcactgaacagata
tttcaagaccaagtcatcgtattattcccttcttccaaggcacttggttttggagtgcta
aagccacaagaggagaggttctacaagggctcaggctctccccctcctgtcttctccgcg
ctgttcctcgtcatggcggccctcagcaagtccatccctcataactgctatgagatcggc
cacacttggcacccttcctgccgggtctccttcctgcagatcaccgggggcgccctggag
gagtccctgaagatctatgctcctctgtacttggtgagacccgtcacccgtcccgcaggg
cgagtttag

>gi568815587r:86851145_87055085|GENSCAN_predicted_peptide_9|338_aa
MGKKQNRKTGNSKMQSASPPPKERSSSPATEQSWMENDFDELREEGFRRSNYSELREDIQ
TKGKEVENFEKNLEECITRITNTEKCLKELMELKTKARELREECRSLRSRCDQLEERVSA
MEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLHLIGVPESDVENGTKLENTLQD
IIQENFPNLARQANVQIQEIQRTPQRYSLRRATPRHIIVRFTKVEMKEKMLRAAREKGQV
TLKGKPIRLTADLSAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFIDK
QMLRDFVTTRPALKELLKEALNMERNNRYQPLQNHAKM

>gi568815587r:86851145_87055085|GENSCAN_predicted_CDS_9|1017_bp
atggggaaaaaacagaacagaaaaactggaaactctaaaatgcagagcgcctctcctcct
ccaaaggaacgcagttcctcaccagcaacggaacaaagctggatggagaatgattttgac
gagctgagagaagaaggcttcagacgatcaaattactctgagctacgggaggacattcaa
accaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaacta
cgtgaagaatgcagaagcctcaggagccgatgcgatcaactggaagaaagggtatcagca
atggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaa
agaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacatctg
attggtgtacctgaaagtgatgtggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggccaacgttcagattcaggaaata
cagagaacgccacaaagatactccttgagaagagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcaggtt
accctcaaaggaaagcccatcagactaacagcggatctctcggcagaaaccctacaagcc
agaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatt
tcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttatagacaag
caaatgctgagagattttgtcaccaccaggcctgccctaaaagagctcctgaaggaagcg
ctaaacatggaaaggaacaaccggtaccagccactgcaaaatcatgccaaaatgtaa

>gi568815587r:86851145_87055085|GENSCAN_predicted_peptide_10|324_aa
MDTFLHTYTLPRLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEEL
VPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILA
NRIQQHIKKLIHHDQVGFIPGMQGWFNIHKSINVFQHINRAKDKNHMIISIDAEKTFDKI
QQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLF
NIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKV
SGYKINVQKSQAFLYINNRQRAKS

>gi568815587r:86851145_87055085|GENSCAN_predicted_CDS_10|975_bp
atggatacattcctccacacatacactctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggctctgaaattgtggcaataatcaatagtttaccaaccaaa
aagagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
ttttatgaggccagcatcattctgataccaaagccgggcagagacacaaccaaaaaagag
aattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggca
aaccgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccct
gggatgcaaggctggttcaatatacacaaatcaataaatgtattccagcatataaacaga
gccaaagacaaaaaccacatgattatctcaatagatgcagaaaaaacctttgacaaaatt
caacaacccttcatgctaaaaactctcaataaattaggtattgatgggacgtatttcaaa
ataataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactg
gaagcattccctttgaaaactggcacaagacagggatgtcctctctcaccgctcctattc
aacatagtgttggaagttctggccagggcaatcaggcaggagaaggaaataaagggtatt
caattaggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattgtttatcta
gaaaaccccattgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtc
tcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacatcaacaacagacag
agagccaaatcataa